Gene
Gene Model ID | aug_v2a.07216 |
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Locus | scaf2716 : 15067 ... 22015 : - |
To GenomeBrowser | scaf2716:15067..22015 |
Genes list of scaffold | scaf2716 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-38 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains TPR_1 domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.07216.t1 |
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Definition | - |
>aug_v2a.07216.t1 tctctatcttcctgaaagcaaccaattccttttgaaattgtgttttgcagatgtcagaaaggctattgatcatgaagttt taaagaattagcttggtgaggacaagaaaggtatgtcatataattgcattattacttaccataacagtgagaaannnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntattgtaaaatctatgacaataatatgataaagatattttataaata atctttttttttcttttttgtcaacaaacaacgataccaataaaaaaagaattttaacacatttctaggaaaacttggtg accaatcaaatcaaaatggcggatttttataaaatgcatgttaattgagaattgaatgattattccactggccaagattt ttgtattaagtctgtattctcaaaagaaatatgtattgtatgcacgatcaagtttacattgctcattttccacttataat tcagccccgaaaatcgggagcccttcgccttggaaattgagtcaatagcatcagaaataaaaaaaagaagaataaaactt aaggaacaagtactggccttgctttacttttatcggatgaagtgtaccacgttaaaagactgaatgaatgaaaacatgaa aactcgaaacaatgagatttgctgctcgtgaattaaatgaaaacttggctatcttgtttccatgacgaaaataaatttga tacatactaaactttctttcgaagttcaagagacaatcagagtaaaatcaagcgaggttgacatagcccaaaaggtcaaa gaagtttattattctttggtcgtgagcgggcggtatcctgagaatcctgcaatctgattggttccgggagcgagcagtat ttcctatctcctaaccacggtcatggtaaccaactacgctaagcgcagaaagaaattgcgaattgaaagagcgaagtttt caatttgttcgtactcgagacctcgggcacaacttttcccaatacggatctccctcccggtgaatagcatatatatacat gacacaccacaacgcaatgtgccaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnncattgattttgttattgtataaatacaaataaacaatacattaaaagatatagcaa gaagttcactgccttttggtggtataatcataattgctatcgagtatttatttcaattgcaaccagtactggatggttat atatatttaaagacatggacaatgatgaatatggtattcttgcccctaatatatggcgagagctttttgaaatgtttgaa ctgaacatccgccattaccaccaaacaaactgttcgattcaggcgcacagttgatgtaaaaaccttgtgcagcgtcaaaa aatctcaaaaagtctttcgaaacaactgtttgacggcaggtggaaagaaacttgtgcctggttattgatacaaaagagta caaattcattcttaaacaatgataactcagcttctcattctacaaggatcgaaccatatggaaaatcgtagcctcgttag caggctgatcggcggacccgaaactatcctagctgccgagtgtacccgacgattcaacgccaaaatacgacacaaattca taattaagtaacagtatctcactagctgacaagtcagtaggctaataaacttaaaaataaagagtgatcatcgaagtaaa ttttccaattgaagcaattggaaagaagaagcctgaaaaatttcgtgaatttatatcatgaatttcatatataatttata tcatgaatttcatatataatttatatcaagaatttcatatataattcacatcatatcactgcacgagaagatatgaactc aacaatttgacctggctgccagcttcacagctcagttggtcgagcatcacacctgtatcgcggaggtcacgggttgaaat cccgttgaggccctgatatttttcaggcttcttctttccaattgattaaattggaaaatttactgcgaggatcactcttt actttcatttacaaccgcagtaccatgtgggtttcatatataattcacacaataaaaatataaagtgaagtgacctggat ctcattaaaactcccgtgatcatctgtcccggtttaaccatccctctttcacctcataaaacttcgtaacgcatatctca aaaccctctccatgaaacctttaggttgagggtctagtcttttccctctaagtaccaagttgttggttcaaaattagttc cagatcattaagatgtttcagtttcaacaatatccattagaccaagtttcatcacaaataagtaaaaagcaaacagtatt tagttgattgataggtttgaaataaatggcgtacacagtaatcatgagtccaaaaacatcctggcatctaaatttctgcc attaacacataaaataaatttcccctctgaagagacagcattaaaagaagaaagtaggtagactcagtcgacaactgttc ctctacaaaatctttcttgggctgaaaagggtatcatttgtttgttagttgctctaactcaatgctatttccttattaat ttatggtaaaaagaaatggatggaaaagacggagataatagagtctacatgaataatggaaggggtgaccatcaaaaagc cattgagtatcttgaaaaatatttgaaagttgcaaaagaaatcggtaatcgggccggagaaggacgagcctatggaagtc tcggttacgcttaccacgcactgggtggctatcaaaaggcctttgagtatcatgaaaaacnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaatcggtgatcgggccggagaa ggacgaggctatggaaatcttggtattgcttaccggtcactgggtgactatcaaaaaaccattgagtatcatgaaaaagg tttgaaaattgcaaaagaaattggtgatcgggccggagaaggagcatgctacggaaatctcggtaacgcttaccaagcac tgggtgactatcaaaaagccattgagtatcatgaaaaaaatttaaaaattgcaaaagaaatcggtgatcggaccggagaa ggaatagcgtatggaaattttggcactgcttacgatttacttggtgaccatccaaaagccattggagctcatgaaaagcg tttaaaaattgcaaaagaaatcggtgatcggctcggagaaggagaagcctatggaaatctcggtaacgtttaccagtcac tgtgtaactggcaaaaagccattgagtataatgaaaacatttaaaaattgcaaaacaaatcggtgatcgggccggagaag gacgagcccatggaaatctcggtaacgcttaccacgcactgggtgattatcaaaaagccattaactattgtgaaaaacat ttgaaaattgcaaaagaaatcggtaatcggaacgaagaaggaagtgcttatcacaacattggaagtgtattcttttctct tcaacaattccaaaacgcggcagaaaattttgaatgcgctttggaagcctttaatgctgtaagatcttgcttgaagtcta gagatgactggaaaataaactttcgtgagctgtacgagacgacatacactttcttatggaagtcgttgctaagcatcgaa aagttcgatgaagctttgtttgcggcagaacaaggacgagcgcagactttgactgataacttgctgattcaatataaact ccatgcatccttgttacctgctacatttgatctcaaagagacagcatcttgcctcttcacagagctttcttcaccaactc tttttctagcaattgaaggacttacgatgaacatctggcttctaagcaggggaaataatgttatatttcggaaagggagg ctggagggtgatagaacaaagagatatcctgtacgcgcgttattgcaatcatgtttagaaaaaataggaactgatgttac agtaagatgtgaagatcgcacaattgatgaactcactcgtgacaggctgtctatcaaagaagtgtgcaaagaagtgaaaa aatcaattcagacttcaaacaatccttttaagccgttttatgatgcaattattggtccagttgctgaatttcttggacct caagacgacgagttggtcattgttcctgatgacgcgctgtgctttaccccatgggcagcagttattgaatcgatttggat tcgctctgttccatctcttacaagttatcaattgctcttaagtgtccccaaaggctatcacaagaagaaaggggtgcttt tggtaggaaatccgtgcttaaaagagttgaaaaaacccttagaggacttaccatgtgctcaagaggaggtagaaatggtt gcgttaattctcaacacaaaacctctaatcgggatacaagcaacaaaagcagaagtcatgaaacggatgtcgtcagctgg tttaattcacattgctgcccacggaaacgagctaacaggagaaattgctctgtctccaaaccctggatggacttccaagt tcccgcaggaagaggatttcattctaaaaatgtccgatgtacaggctgccaatcttcgagctcgtcttgtggtgttaagt tgctgtcacagcggacgaggcagaatctggaagggcgagggtgtggtcggtatcgcacgtgccttcttggcagcgggtgc tcgttctgtgttagttgccctgtgggcaatagatgacgaagctaccatggtgttcatgaaaacgttttaccaacacctaa aggaaggaaaaactgccagtgccgctgttcaccaatcgatgaaatcccttcgtgaatctgaggaattttctgagatgagg tattgggctccattccaacttattggagatgacgtagagattgaattcgaggcggttgatgacgtcaaagaatggaagag ttaactgttccagtttgttcttttttttttgtcacactggtgagattttagtaaaacgtaaaagcttgc |
Protein
Protein ID | aug_v2a.07216.t1 |
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Definition | - |
>aug_v2a.07216.t1 MDGKDGDNRVYMNNGRGDHQKAIEYLEKYLKVAKEIEIGNRNEEGSAYHNIGSVFFSLQQFQNAAENFECALEAFNAVRS CLKSRDDWKINFRELYETTYTFLWKSLLSIEKFDEALFAAEQGRAQTLTDNLLIQYKLHASLLPATFDLKETASCLFTEL SSPTLFLAIEGLTMNIWLLSRGNNVIFRKGRLEGDRTKRYPVRALLQSCLEKIGTDVTVRCEDRTIDELTRDRLSIKEVC KEVKKSIQTSNNPFKPFYDAIIGPVAEFLGPQDDELVIVPDDALCFTPWAAVIESIWIRSVPSLTSYQLLLSVPKGYHKK KGVLLVGNPCLKELKKPLEDLPCAQEEVEMVALILNTKPLIGIQATKAEVMKRMSSAGLIHIAAHGNELTGEIALSPNPG WTSKFPQEEDFILKMSDVQAANLRARLVVLSCCHSGRGRIWKGEGVVGIARAFLAAGARSVLVALWAIDDEATMVFMKTF YQHLKEGKTASAAVHQSMKSLRESEEFSEMRYWAPFQLIGDDVEIEFEAVDDVKEWKS* |