Gene
Gene Model ID | aug_v2a.07465 |
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Locus | scaf2797 : 6212 ... 9706 : + |
To GenomeBrowser | scaf2797:6212..9706 |
Genes list of scaffold | scaf2797 |
Manual annotation
Study field | Autophagy |
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Gene name | ATG8-4 |
Annotation by Blast2GO
Annotation | GO |
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gamma-aminobutyric acid receptor-associated protein isoform x2 | GO:0000226 GO:0000421 GO:0005790 GO:0005794 GO:0005875 GO:0005886 GO:0005930 GO:0008017 GO:0008340 GO:0008625 GO:0010506 GO:0015629 GO:0016236 GO:0019901 GO:0031386 GO:0031396 GO:0034423 GO:0035096 GO:0044753 GO:0044754 GO:0048487 GO:0050811 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.07465.t1 | gi|676467926|ref|XP_009058046.1| | hypothetical protein LOTGIDRAFT_182626 [Lottia gigantea] | 5.0e-37 |
aug_v2a.07465.t1 | gi|156387826|ref|XP_001634403.1| | predicted protein [Nematostella vectensis] | 8.0e-37 |
aug_v2a.07465.t1 | gi|524889167|ref|XP_005101144.1| | PREDICTED: gamma-aminobutyric acid receptor-associated protein-like [Aplysia californica] | 4.0e-36 |
aug_v2a.07465.t1 | gi|284005106|ref|NP_001164700.1| | GABA(A) receptor-associated protein [Saccoglossus kowalevskii] | 4.0e-36 |
aug_v2a.07465.t1 | gi|665390610|ref|NP_001285088.1| | Autophagy-specific gene 8a, isoform C [Drosophila melanogaster] | 6.0e-36 |
Transcript
Transcript ID | aug_v2a.07465.t1 |
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Definition | - |
>aug_v2a.07465.t1 tatttggggcacttgtgtttgagatcttgtaaccatatccagatgtggccagctcagatgtaaaaggcatgagcgctagg caaaatagcagaggtgagaatgagtcatggattgagagatccctcttttgatcttgatctggtctgttgtgatacatcca tcgttgtaacatagcttcatggtggttttccagttactcattgatgtttccatgaatttgatgagtttttcattaaatct gtgcatctgtagtgtatatagtatccaactatgagggacatatgagggacactatcataggctttcctataatctatcca ggacatactcaagttctttttttctttttgcagttttctatgatcttcttgtttattaggagctgatctttgcatccata cgagttcctggtgcaacctctttgttcttcttgcagtatgttcttctttgtgatgtgggtttagcttctttctgttaaaa tcgatgtgagtactttgtaagatgttgataagcaggcaattggcctgtagttcttggggttctctgtgtctttgcacttt ggtagtatgtatgtttgtgccgttgtgaactaatgaggcaaactttctggatgttctattgcttggttatatgcattcag taggtgttgatgtagggctgtgagctgcttgagccagacgttaggaactgcatcagggcctggtgacttccaattgcttg ttttcatcaatgcagtctgcaactcatgttgggttatgtcctcccaaggttggcgttctgtatcaacatatttcaactct tctctctttatccactctgccgaatggttgtgctctctatcattctccaagatgttannnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttctctattcttgtcttctactttggt tgtagctgggtattccttcttctctttggggttttggtgttttacctaacttctcagatactacatatgcagtcacatat tgtagcaggttgatgttattgaggtcgtgtgtctcttctgctatttccagttgaattgcttggttcgcttgtttgatcaa cagctcagcttttctgtttactgttatcttaggtagagggggtctctctgtcatgttggtgttttcccattcagctcttg ccctcctaatttctttagctaggtccacagatggattttgtgttggttccacctcatctacttttgtttcttcaatagca ttgttggcttcttctacagccagatcatctacttatctgtttgactgttttgtacattcaattcactttcaacccgttgt ttgatttcatctatttcaattcctgttaatttgttttgtttgtcaataaatctacgttggttcatcaatgcgtggtcatt tagattaggtctttgattaggatttcttcctctccatattctgtatggatcttttgttcctccttcactgggatctgcct ttgccttgtaatagcagaacatgacttcaatgcaatcctcttgtgtccatttctgtctggtgtttattctatctacgttg gtagctggaggttctagcgtggaaggaccctgttgggagagactctcattttggttggcctccactgacgcttgagaggg tagatcagtaaacaatttttcgacctcagcctgatcactcactgggggacgcgctccctgttgacccgcgcgatgagcga tgcgctatgaattccttatatttctactactcatattggtgaggatgctatttgacccgtagctggggagaggctatccc gcgccagatctcaacttggtatttctaatcctcttttgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtggagaccggttttgcgtg agaggtttgataataatgaatcgtttatcaattgaaacaccttactgtcttgcgactgaattactctgtaagtattaact tttacaattataatcaatatacatccataactattttaagaatttccaatacagtaatatttatagtaattaagaaagcg ccaaaattatatgtattaaaattcctctagttacaatggcttacaataaaacttttcttaaaaggttttttttttcatag tggttcttaaacttcctgtttgatcttagatccctgttttgcacttctttagccttcaaaagcgcagcgagtttgtgatt tacattaagacagctagcgtcaaacatatctagccagcaagactgttctgtagataattgatttatgctcatggccttaa tctggtgatttttttggtagatgagttattaatatgtttgtttttctctttacagttggacagttctacttccttattcg taaaagaattcacttgagacccgaggatgcgttattcttttttgtcaacaatgttattccacccaccagtgcaacgatgg gtcaactctaccaggaacaccatgaggaagacttcttcctttacatagcttacagtgatgagagtgtgtatgggggtcag aaaaattaatttggttttcagtggagcaagcggtgcaacggtagttggtttaagcttcaaactcttgtaaatagccagag atattttccgtttagtttcagaaaatttgtcagtaattgatgtctttattataagtgttaatcgtttttctcggcattaa ttttgattgattcctggaatgcatccatgtctttttttgaagcctcattttcagtctttttatgtcaaataaaaattaat tgcaaaggcaaagagttgtccatttagttttagatattaattttgtggccagtatacgtgttttgttaaatcaagtatgg tgttgctaagttaagaaagagaacaagattatttgttcgtcttgatacaacaggaagaaagcgagtgacctacggacttt tatgattagtttagtgacaagtgaaaaggaatgttagtgctttctaggtgagaggtttcaagtataaagaagtaaagttg actaccctaatctgtacgtgtatcgttattgtcaattattgtgaaaaatttccaagaagaatatgacttaccctggtgta ttttctggggacacaattgtactacctatatacccgacaaatacactgtatagtacttgcatgaataacttcaatattgc tgaacataatcccttatgttgtatatgcgtgaaaaaaaaaacaccatgcatggtg |
Protein
Protein ID | aug_v2a.07465.t1 |
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Definition | - |
>aug_v2a.07465.t1 MSARQNSRVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGGQKN* |