Gene
Gene Model ID | aug_v2a.08155 |
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Locus | scaf3115 : 52057 ... 58185 : - |
To GenomeBrowser | scaf3115:52057..58185 |
Genes list of scaffold | scaf3115 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-DHC-f22-19-6-25 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. AAA6 domain was found by Pfam search. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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dynein heavy chain axonemal isoform x1 | GO:0003777 GO:0005524 GO:0007018 GO:0008152 GO:0016887 GO:0030286 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08155.t1 | gi|625247764|ref|XP_007615163.1| | PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal isoform X2 [Cricetulus griseus] | 0.0 |
aug_v2a.08155.t1 | gi|699627225|ref|XP_009898036.1| | PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal [Picoides pubescens] | 0.0 |
aug_v2a.08155.t1 | gi|545501980|ref|XP_005621521.1| | PREDICTED: dynein heavy chain 3, axonemal isoform X2 [Canis lupus familiaris] | 0.0 |
aug_v2a.08155.t1 | gi|545501978|ref|XP_005621520.1| | PREDICTED: dynein heavy chain 3, axonemal isoform X1 [Canis lupus familiaris] | 0.0 |
Transcript
Transcript ID | aug_v2a.08155.t1 |
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Definition | - |
>aug_v2a.08155.t1 caaattattatattttctttttttcaggtcctgtcagttgtagcccagcagatcttgacaatccagcgagctgtaatgga acaagtcgacaagtttgtgtttgaaggaactgaaatatcactggatccatcttgtactatttttatcaccatgaacccag gctacgccggacgggctgaactcccagataatctgaaggtaagtgaaggaacgataaaatccatcacaacaaaaatctat ccaaagcgtttttcacatttgtcctcctcaaagtaatacacacatcttccatcctatatcctcatttgtatttgtatagt tggaaacttaactttcgcgtgattactcaaggtaatgtttccattacaagcggttaaaagttggctgtttatcgacatga ttcaaagaaattgccattagatgttaaatttgttaccatatctttttttaggttcttttccgcactgtagcaatgatggt tcctgactatgccttgatcagtgagatcagtctatattccatgggatttgtcaatgctcgcagtttgtcggccaagattg ttgctgtctatcggctctgctcggaacaggtgcggaaacagttgcgatttgtgccactcacgctacacattagaacgagc gaaagaaaacttttgcactacgttttggttactaaatggtttttcctctcaacagctgtcttcccagcatcactatgatt atggaatgcgagccgtcaaatctgttctcacagcagctggaaatttaaaactgaagtatccagaccaagacgaggacatt ctgcttcttagatcgatcacagatgtcaatttacccaaggtgggatcagcttttatcatgcgtcagcggtagatatacca gccgcgtgatggcgctatcacctaacgcatgcgtacaataatgtcagctggcaatgtcacaatcatagaagtggatacct taaaaccaatccttttttacttaacgtgcctttctctaagcaataagattgccgtcattttacggacagtttttgttagc aaaaaattggagcaagatcttaagccgaaagaagtgaagccgagtattgcgagtcagcattgtgttgtttataaatttgc atttgatttaccctgttctgtgagctttttcctctggtactccggatttcccctctcaccaaaaaccaacatttgatttg gtttgattcagtttgatttttctacccgattagtaggacacgtgtgcccggctataaggnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagttgtgtatttttcaaccgtttctttaaatttatt aaatgcttttaagaaaagctttcgcaattttttataactaaatgtttcaaaaggtcagttgttgttattgtttttataga aagactaaattgttttatggtttgatttctagtttttgtcacaagacttgcctctgtttcaaggaattgtgtcagacttg tttccaggcattactctaccatctccggaccacggggtcctggaacaggcgctcaagcgaaacatcaagaagctgcgatt gcaagcggtgccttggtttattgcaaaagtcatacaggcacgtaatgttggttcttaagatcatgttcagtcttattagc aacgtttgccttttagttcttcatgggtgtgcgctcgtatgtgcccacaccatgtaagcgaaatgaagtgtcccctcatc ctctccttacatgcccgcaacaccaaggtcatttgcgtggagaaatacaagcaatggagatcatgaagtggttttctttt tctactcgtgaaatagacaaatcctaagcttaaaaaatgaccccaacctaacagggacatatttggtgacgtttatcatt atcaaattgagcgtgggtcttttttgtcaaattgctctgcagcgaaaggatgttaaaatagtttttgatgaagaaatgct gctgtaataattctcttcgtttgtcaggtgtacgaaatgatgttggtgcgacacggatttatgattgtcggtgatcccat tggggggaaaacctcagcctggaaagttcttgctgcagctctgtcggagctgggaaaagatcaggattcagacgaagtgg cggtatgaatttttcctctgctctccttccatttcgtaattaattagcaggtatatttatgtcaacccactactcacgcc aggaaatggcgttgaaacaagaaaggctgatctcattgtggtcacgatctcgtatcatatttcgaaatgacttttttttt ggcacccatggctaacagtcgctttcattgctttcgttaacataaagacattgaagaaagtttgattatgttgcacgttt ttccacctcacaaatctacagaaatgcaaaagcgccaattcgtttgcatactcaaattgtgttttaagacaattttaaga gaacccccaattcactgtctttatgatacctaaagatatctattgctctagtgctaaatcatatataacgtattttttag gtcaactacagaattattaacccgaaagcagttaccatgggccaattgtacggaagatttgatcctgtgtcacacgagtg gtcggacggtaattgttgatacacatattttcttttttgcgtaacggttatcatcgttatcatcgtcattgtcatcataa aagactatttatgccatatctgagagatcagaccacaaaccaccaatcatcagaccacaaacctccaaagttctcgttgc atcggttgtcattttgggtttcctcttcatcgtaaccgtactagttgtgtcctcagctagcagagttgtttgattgaaga ctttccaaaagtggttgatcgcaataggcggccttcatcgtgtaagactgtcctgttttttaattaggggtgcttgccaa tacgtttcgtgaacatgccagctctgtgagtgaagagcgcaagtggattgtgtttgatggtcctgttgatgcagtgtgga ttgaaaacatgaatacagtgcttgacgacaacagaaaagtaagtaccttgatcgaacttgaatttaagacgttgagttct ttgctgcgcgcctccatgtcgctgtgtcaagcgttaaatttaattttctatcgactggctcgctgaatcaaaaagcagct acttcgaatattgtccttgaataaaagcgagatccacagggaaagtcaaacannnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnncccccccccccccccttcatgccagtatgtccctcgttcgatttcggtgcg catgcagcgtctgctccgtgaggcttttagttttccatgttatcattacccaacttttctttccgcaatgaaattttatc tatatgttcttcttgcgaagcaataaatttgagtggtcctcacagaagtaaaggttattttaaaacattttgcgtctttt gttgtttagatgatgtttgattggttgattccaccttgcctggattttgttaccagacagtgccgtgaatttgttcgtac ctcagcgatgcacatggttagctccatgttaaccctgtactctattctactggatgagttgaggtaatacaagtaaagtg ttaaggaggcggcggcgtgtcccgttagctcagacatgtccaggattgcaactatttagatgcatgccgacttaagtaag ctgcacgaagtgtcccctttatctttgtctccggggatacagatagtaagggtcatgaagtgtcctcctaaatatttgct ccacaggaagacgaaaaagcattaacctaaccctaacgtaagaagtaatccagacgaaagcaccaaccctaatgttacaa ataggtatttaaggcttagaagtaaacgaggctcttcgtgatattagccaaaattcatcttgcatataatagttttcttt ttttagcggttttgttgcgccaagttctccaaaacaaacattttctatgtgaagaggtagctcatgtaatgttttctttt ggttaaatatttagagagccatctcaagaagagaagcgaaaaacagtgatggacgaaggagagtttgagactgttatgga cgagaagccggcgaagactgaggccgaaatcattcagtggctccaatcccttttcctcttctctctttgttggagcgtcg gtggaaacctggacacggattcgaggttgaaattcagcgagtattttaaagttctttgtgctggcaccaacaaacaacat caaaggtttgtgtttttaaggcagtagtaaatcaaacatgattcagagcagttttcaagtgactgtcgaaagtaattgcg cgattgcgattgcggtgttttcaaccagtaagaaacaaaaccaaatcca |
Protein
Protein ID | aug_v2a.08155.t1 |
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Definition | - |
>aug_v2a.08155.t1 MEQVDKFVFEGTEISLDPSCTIFITMNPGYAGRAELPDNLKVLFRTVAMMVPDYALISEISLYSMGFVNARSLSAKIVAV YRLCSEQLSSQHHYDYGMRAVKSVLTAAGNLKLKYPDQDEDILLLRSITDVNLPKFLSQDLPLFQGIVSDLFPGITLPSP DHGVLEQALKRNIKKLRLQAVPWFIAKVIQVYEMMLVRHGFMIVGDPIGGKTSAWKVLAAALSELGKDQDSDEVAVNYRI INPKAVTMGQLYGRFDPVSHEWSDGVLANTFREHASSVSEERKWIVFDGPVDAVWIENMNTVLDDNRKMMFDWLIPPCLD FVTRQCREFVRTSAMHMVSSMLTLYSILLDELREPSQEEKRKTVMDEGEFETVMDEKPAKTEAEIIQWLQSLFLFSLCWS VGGNLDTDSRLKFSEYFKVLCAGTNKQHQRFVFLRQ* |