Gene
Gene Model ID | aug_v2a.08247 |
---|---|
Locus | scaf3160 : 68356 ... 74940 : + |
To GenomeBrowser | scaf3160:68356..74940 |
Genes list of scaffold | scaf3160 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
probable atp-dependent rna helicase dhx34 isoform x1 | GO:0000166 GO:0000184 GO:0004004 GO:0005634 GO:0005737 GO:0006396 GO:0043167 GO:0044822 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08247.t1 | gi|156390342|ref|XP_001635230.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.08247.t1 | gi|390339430|ref|XP_003725001.1| | 0.0 | |
aug_v2a.08247.t1 | gi|524873454|ref|XP_005093474.1| | PREDICTED: probable ATP-dependent RNA helicase DHX34-like isoform X1 [Aplysia californica] | 0.0 |
aug_v2a.08247.t1 | gi|699238006|ref|XP_009862454.1| | PREDICTED: probable ATP-dependent RNA helicase DHX34 [Ciona intestinalis] | 0.0 |
aug_v2a.08247.t1 | gi|403299114|ref|XP_003940336.1| | PREDICTED: probable ATP-dependent RNA helicase DHX34 isoform X1 [Saimiri boliviensis boliviensis] | 0.0 |
Transcript
Transcript ID | aug_v2a.08247.t1 |
---|---|
Definition | - |
>aug_v2a.08247.t1 gaaaaactttagagtttcaaggtttaaatatttaaaggttcaatattattattatggatgtttgtccggccaaaaatggg atatgtccgaggaaaaataggttagaccggtcaatttgaccggtgccagccgggaaattatttgcagccctggatcggta acttacagtacggctctctaactcggttagaaagaggtgttaaatgtttgtacttccatgaatgaaggactttactgaag cttcttccaatgtagcagtaataattacatgattgtggtgatatttgatgatttgtaggtgcctcagtatcttttgcatt caggctttactgccattgcttgcactcaaccgcgacggatcgcctgtatctcgttgtctaagagggttggttatgaaaca ctgaatgagtacggatctcaagtgggctatcaggtgagagaaccagagaataaaaattaataaatcatctgtcaagcagg ctaatgcctgtgtcataaacaaaatttcaagctttaagtgttaattgtttccttgctgtcaaatattgtcccgtctcaga ttcgttttgaagccagcaaaacacgtgccacgaagattctgtttctgacggaaggtaaaatgaatgcgtaatacagttgc tatagcctgtgcaacgtaacatcggaaagcagagtatcagagctatttgactgctcttcttgctctgaccatagcttgtg caaatgcaaaacttactcaaaaccatttggcttaaaacattaagtttggtacctgagctaggcttttaattttcgatcgc cgttggcagcctttaatcgaaatgatatgaacaaaggcatcgtcctttcagaacagcttaggacacataaagtggctgtc tgacatttctatctttcagatttttagatggtacctttacaggatatccctttacatgtaatcatcgcttaagcaaaaac atcttagtataccctgaaatcagtgtatccagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnngagagtatgcgcagcgaactcgccggtggatcattttgccgcttcacagttcactctcggtagaagat caagacaaggtggggaactcagttctcagtcattgctcaccgtcacgtggtctgcaattagtctacttttcaccacttta agccaatttattagtttcccttgagaaatacttcttctacctagtacttaatattcgtttcataaatttctcttgtcatt tgctttcgcggccaaaaagtggagaaaagttgtgaaacccagagaaacgctttcctacacgtagtaaagtcgttcgttct gaggcatttctgtttctcttccttccacttcacgaagaaaatcttttcacaggtgtttgatgttcctcctgaaggagtgc ggaaatgtgttgtatcgactaacatcgcagagacttccatcactatcgacggaatacgattcattgttgattctggaaag gtaacttggtaaatctgaagatgggtgaaatttccatcggcatgtgacatagatataaagcaagacggaacacttttgaa ttaaaaattaaaaacgggtaacccgatcaacctttcacaacagaataaagtgttttcaaagttaactatcttctgtggtt ttcattttttctatttcttgttaccttttgttttctttttctaattttatgattcgctttatcccactcatcggaatgtc tatggtaaaacactcaactaacaaagctccctcacttttgtgtttataggttaaagagatgagttttgatccagaggcaa agatgcagcgacttcgtgaattttggattagtcaagcaagtgccgaacaacgcaagggacgagcaggttcgtagtttgct acgtttgatgagtttgttcctcaatcttcttcgtctttaaacaaggtacggctgtcgaaagttgacattttgcatgcaaa gacagtagtttgggccgatctctttcaaaacgaatcgtctcttcaagattgaagatacttagcaatgcaaatgtaaaatg gaggtcgctgctagtcgccatccgtagctcaaagactcatgccaactggaagtgaggtttttagtacttgagtttttcat tctgaaagacaagagaaccaacgacttactttcagaaaccacaaggacttacagaaagccatttttctctctttctgtgc ctagtttggggttaatggcactttcttcatcaccttcgacttagccaatcaaaacgcgtgaaaatcaccattcacttaaa agtaatgtcccagtccttttttccaggtcgcactggtcccggtgtgtgttttcgtttatactccgagaatgactaccagg ccttctcacaatacactactccagagatacaacgcgtccctcttgactctattattctacaaatggtatcgcttggcgtt actaacgtacgggagtttccattcattgaaccgccacctgtctcaaacgttgaaaattcaatccactttctcaaacagca aggagccttgacagaaagtgagaaattgactccaattggtcacatgctggctcaattacccgtggatgtcgtcattggaa agatgttgcttattggttccgtgtttcacgtaatcgagccggcaatgattatttccactgctttgagtgtccagtctccc ttcacccgcaggctggatcatgacccagatgtgacgtcactgcgacaacccctggaatcagatcatggcgacccttttac tttcctcaacgcttacgatgaatggttgcaggtaggattgtgaacaagaattcaaaatgtatgtaacagagttattcact ctgcatttaagggaaagccttagcatagccttttttttttaaataatgccaaaatttaaaatagtgttaaccttgctttt gtgtaaatctaaaatggttattgatcaaagctgtcttctcttcggtttttcatttgaagccttattttgacacgatatta ctcagcattggtatcaatgggttttatctcgcgttggctgtggaatagattattttttgtttgtcggatggttggttgag ctgatttcttcagtctttttttttacggaggaaaccgcatgtttgttcagtctagttggtcaacttttgcaaaccagtgt aaatcgtgaaactattatcagtttatcttgttaacttggtggccgaacgaaataccaaaaaaagccctttaatttctgtc ttctgttttcaaaacgaaacattctggccgaacgaaaatactgaaacagaacctaaactaaaaactaaaaaatgctaact ttataataaacaggtgacgaaaaaactagctgatctgcatatataacgaagcgaaggcgcaaaagcaggattatacaaag gaatctatggctagaaatataatgagtgcgtaggtgttaaggagcgctatggctgacaaagtgaaatagcgaaaagctgc ttacaaaaaaagttgaaacgattccttctgttcacttggcttggggagacagtaaaaaaaactccagtcgtttctgtcct tgaaacattttctttttgaaggtatggagaaatgtttggcagccgaaatactccaacaatttgacggcttactggcatta accacgtagatatttatcgagtcaaaccctcaaatttaatgttgtagggcgtgtcctttcttcaaagatccttaaattac tcgtcttgggttttgttgtttttcgtgtcatctttatcagagacgcgacaatcttgctactcggtaccgtattcatatca ttttgcttttagattaaaagccgtgaaggttcttcgcgaaaatggtgcaaaagaagaggtctcgaagaacagcgattcta cgaaatgtccaaacttaagggacagttcgagcagctgttgcgggatcatcgtttgttggattccgtggaacgggacgcag acgacgactatgagcgagaagacgaggaagaaaaaaggcgccaattgaaaaaacttaaacgagatcaccggaagtcttca aggaaaactaaaatgttgaaacttggagaagatgagaacgctgaaagtgacgaagacaacagcacagacatccgtgatct tgagtttaaactgactcatgaccttgacaagctgcaggcaggaagtatcgccagacgcagcttcacattgcgagaaatca atttgctcaaagtcattctctgtagtggtttgtatcccaactttgctatacctgatgagggaaatacatgtaagagagac tcggaacagctatttcacagccagtcaaagcagtttcttcttgttcacccaacgagtgtttttgcgactcgtcccgacct tcttcaacccgcggactatgcaccttgtaaacctgaatcatcaaactctaacgccgggttttccagcagtcatcagctgt tagcgtttgtttctcttttagagaccaacaaaccatatttggttaacgctatgcgagtgccagccctacagactcttctg ctgtttgcgcaaggcttggacaccaacgctgatctgacgcgtatcattgttgacagctggcttgaaatttgtctgctaga cagtgcaacggggcagaacgtgcttactgccgttcagcagcttcgtgcaacatggacacgcttgcttaagcttcgattcg atactagcaacaagatggagcgcaagttaggaactcgacggaacaaggagcgagatctcgagattgttttagcaaagaaa ctgtccgaatttctagacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatt agtggtatgtacgcgaacctatttatgtcacgttctcatgcaccctatggcaccagcgctgggcaagagcttgcacgtcg ttaacttaaccttcatttatgctgaaatacaaagtacctttcccaactcactatttcaattgagaggaagctaaccttgg gctaaaatttcctccttgtccttaatccaaaaaatttgtcaaaccttgttaaatcgggtacctgctgctgtagagcagag ttggaaacaagaaaacgacattata |
Protein
Protein ID | aug_v2a.08247.t1 |
---|---|
Definition | - |
>aug_v2a.08247.t1 MFVRPKMGYVRGKIGFTAIACTQPRRIACISLSKRVGYETLNEYGSQVGYQIRFEASKTRATKILFLTEEDQDKVFDVPP EGVRKCVVSTNIAETSITIDGIRFIVDSGKVKEMSFDPEAKMQRLREFWISQASAEQRKGRAGRTGPGVCFRLYSENDYQ AFSQYTTPEIQRVPLDSIILQMVSLGVTNVREFPFIEPPPVSNVENSIHFLKQQGALTESEKLTPIGHMLAQLPVDVVIG KMLLIGSVFHVIEPAMIISTALSVQSPFTRRLDHDPDVTSLRQPLESDHGDPFTFLNAYDEWLQIKSREGSSRKWCKRRG LEEQRFYEMSKLKGQFEQLLRDHRLLDSVERDADDDYEREDEEEKRRQLKKLKRDHRKSSRKTKMLKLGEDENAESDEDN STDIRDLEFKLTHDLDKLQAGSIARRSFTLREINLLKVILCSGLYPNFAIPDEGNTCKRDSEQLFHSQSKQFLLVHPTSV FATRPDLLQPADYAPCKPESSNSNAGFSSSHQLLAFVSLLETNKPYLVNAMRVPALQTLLLFAQGLDTNADLTRIIVDSW LEICLLDSATGQNVLTAVQQLRATWTRLLKLRFDTSNKMERNGMYANLFMSRSHAPYGTSAGQELARR* |