Gene
Gene Model ID | aug_v2a.08466 |
---|---|
Locus | scaf3233 : 82806 ... 85567 : + |
To GenomeBrowser | scaf3233:82806..85567 |
Genes list of scaffold | scaf3233 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 53-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BACK and Kelch_1 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08466.t1 | gi|512907858|ref|XP_004926547.1| | 1.0e-15 |
Transcript
Transcript ID | aug_v2a.08466.t1 |
---|---|
Definition | - |
>aug_v2a.08466.t1 ttgtcgtgagcaatttgcttttgccgtgaggaattctgaatagtgtcgactgtttttgtttttgccgtgaatgtttgtag tttcccgggagtaattttaatttgttcttctgaattttattttcttgctctgaattttattttgccgtgacagttgtggg ccaccgtaacggaaagtaaaatggcgtcaatgtataaggacatttgtgagaaggaagagtttctgtctgacatgaatgtc gatgtattagcagctcttctctgtcgagatgacctcagaactaaatcggagaacttcgtcttcaaatcagtgatgcagtg gatcaagtacaagggagaaaggttggatgtgggagctaaagttatcggagctgttcgtttgggactggtggacatcaagg atgtgatcgaggaactcgatactgaggaaatgaaggcgattccagaaataaacatgctgttgcacgaagcattaatacac aattccaggccttcgaggagttccgcgttcgcactggagaaagggaaaccaagatcaatgaagtcggtaggagagacagt cttagagtttgtacaaaaacatcgtttgtctaataacgagtgtaattatttttttctcaatcgttcgagcagtcttctct ctgcttgtcacgcaacgccaccccatcaccacccttccttgacttcctcaaaatgagacttccgctgcacaagaaggaga ttgtaaggcaatgaaaggcttcccgagattaaaacacatatcgactatacacaatgagattcagggctctaggaatgtcg tgtgttatgatgtccccttcaactgcttggtgagggttctacttatggataacgggacacatcttgtgatgtcaatacaa aaatgcacgaaccaatggagtgggcaaccttaacttattttcctcaggagcaaaaaaattctatgaaacttactacaata atttgatgtgaaagcaaaaagaaacccagttcaagttattctgatttccaccatgattattattatttttattttcctac ctctgccccatatgcccttttcaaaagctgcagactttcttctttttctactctttcatgggtgactccaaagaaggtgt aggtacccttatttgggcaaatttcaaattttcgtgagacaaaatgtgcgacaataattaatgtttgattttgtatgaga gagtacttcattgaatgacaactcaaaaaaactttgaaaaaacccaagttcccttagggcctcccactgtgccagccatt gcattaagaagtggaggatgctttaagctactcaaaaacatactcgtgttgttgacttttacatttccaggtactggttg ctattcttcccaacaatgacatctcttattttgatgtccagtccaagacatggaaggcgttgtcaacagtgaaaaaacta ccaccggcagttcaatgttattgtgcggaacttattggtaattgtttatatgttgcaaaaacggtcaacctaaggaaata tactattagttgttatgacatagttcataatgtttggagaacactcccaccaattcctggcccatcagataatcaaattg gctccttgtgccatattgaagaccatctctacgtcatttacaagtcttctgctccttacaggtttaacttaacaacaaat cagaggcaacctattgctagttcaaaagctgtctgtgagctgggccaaaaaacattctgtaacaaagcagctactgtgta caaatcatacctttttgtattgtgtggccaaggacaaaatatcaaggaaatctctggaggaaagctcatttttcgtcgtc agacatcttcatctgttctatttcgttttgatcaaaagaaaaaccattgggaacagaaagcatcaaccaaaactccacac tttgggtccagtctttttgtagtaaacaataacctctgtgttgctggggggaggtgctcattcgaaacatcatttttggc atcatcgagcaatcctgctggtggtccagctgccattgaagtttacaatgaccaagaaaatgcatggtctgttgtgaaac aaacacacattccaccaaacaatcttggtgcagtagaaattgatggcagggtatatttcatcatcaactctttttcagtc gacagtggtattagaatcccaccaggggaggtctaccctgttattttggatgagtgggaaaagttaagaaacatcaagga aagtgcagttttgtgctatgttcctctaaatacagagaatcttacaacaaaatgaataaggtaacctgaaaagctgaggc atctcaataagtattagtgttttcatggtcttaaattgacaacttgacagcaatcaagttgtgttgttttctagcattta tccattgtttaaagtaaaacaattttaaatttttcttaaagtagaatctgtgacaaatccaggtaaacttgaagtctagt tttgtgctaattaacatcaaacttttaaatgggatattggaacagtgaagacaatcatgggaagcaagagtagatgactg ttgtgagagaaaacctctcaaaggtcctcacagcagagaagcaaactatcaatacacttatgtaaacaggattgtccaat tcactgacacactgtgatccctagcttgttatgtagatgtcacagagtgtcttcctgacacagagtgtaagggtaaccat aacagaatttctagtttctaaagaaactgtggtgctgcgtcg |
Protein
Protein ID | aug_v2a.08466.t1 |
---|---|
Definition | - |
>aug_v2a.08466.t1 MASMYKDICEKEEFLSDMNVDVLAALLCRDDLRTKSENFVFKSVMQWIKYKGERLDVGAKVIGAVRLGLVDIKDVIEELD TEEMKAIPEINMLLHEALIHNSRPSRSSAFALEKGKPRSMKSVLVAILPNNDISYFDVQSKTWKALSTVKKLPPAVQCYC AELIGNCLYVAKTVNLRKYTISCYDIVHNVWRTLPPIPGPSDNQIGSLCHIEDHLYVIYKSSAPYRFNLTTNQRQPIASS KAVCELGQKTFCNKAATVYKSYLFVLCGQGQNIKEISGGKLIFRRQTSSSVLFRFDQKKNHWEQKASTKTPHFGSSLFVV NNNLCVAGGRCSFETSFLASSSNPAGGPAAIEVYNDQENAWSVVKQTHIPPNNLGAVEIDGRVYFIINSFSVDSGIRIPP GEVYPVILDEWEKLRNIKESAVLCYVPLNTENLTTK* |