Gene
Gene Model ID | aug_v2a.08483 |
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Locus | scaf3239 : 2650 ... 9915 : - |
To GenomeBrowser | scaf3239:2650..9915 |
Genes list of scaffold | scaf3239 |
Manual annotation
Study field | Cytoskelton |
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Gene name | Actin Domain Containing Gene10 |
Description | This gene model shows homology with Homo sapiens ARP actin-related protein 6. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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actin-related protein 6 isoform x2 | GO:0005634 GO:0006338 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08483.t1 | gi|584026806|ref|XP_006807966.1| | PREDICTED: L-fucose kinase-like [Neolamprologus brichardi] | 0.0 |
aug_v2a.08483.t1 | gi|562823250|ref|XP_006141441.1| | PREDICTED: actin-related protein 6 isoform X2 [Tupaia chinensis] | 0.0 |
aug_v2a.08483.t1 | gi|548466769|ref|XP_005680553.1| | PREDICTED: actin-related protein 6 isoform X2 [Capra hircus] | 0.0 |
aug_v2a.08483.t1 | gi|291229682|ref|XP_002734802.1| | PREDICTED: actin-related protein 6-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.08483.t1 | gi|156354111|ref|XP_001623245.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
Transcript ID | aug_v2a.08483.t1 |
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Definition | - |
>aug_v2a.08483.t1 tctagtagttagtcttttatttcattcaacctgaatacttttcttatagagaggcttgaggacaaagtaaaggatatttg cccggtttgagatccttaacagatcattgttaaggactgctgatcccgggaggggggggagggggggctcctatatttca tgaaactcggagagaaacctggaacccacactcatccccagagtctgctcggtgttagtgattcaagatggcggtcttag tactcgataacggcgccagttcagcgaaagtcggttacaacacatcagagaatccaaggtaaaaggagaatacaatgtgt tgcaaaatttttatgcaataagttaatcaaagtcaccttttatatttagactcatacccaactgcattttcaaagctaag agtgagcgaagaaaactgttcattggagatcagcttgaagaatgtaaagattattcaggacttttttatgttatgccatt tcaaaaaggcttcctggtcaactgggatattgaaaagcaaatatgggattacatgtttggaaaagaagtaatgaaggtaa atttattaattctaaaatgatcaataattatcggtatacactgtgcttaattcagttgatcgcagtatataatgagtatt acactgatcgcagggagatgaggttgtgaattggtgccttaaaggttggtagggagcctgagaaaattcaggcctaggaa ttaaccatggcaacctcatactgaccataattattttgctctaaattgagaagacagagagggacgagagctgcaatccg caaagtcttgttctaaaggaacatttctttcctattttgtctgtgctaatgaggctagttggtctaattagcacaaagtt aatagaataattttttggccaccgtttgtgcaaaattcagtctatttcatggaaggatcatccaacttgcacagagccaa tgaacaaaccatgcatgaaaatggaactaagaagagctgacccaggcactgttagacttcagactcactttgtactatca actaaatgagtaatatctccagctgtcctcaggccttgttgctcatcatgtagaatgaaagagaatggccaatgaatgtg gcttttttttccctcaggttgacttcccagaaacaacagttcttgttacagagcctcaattcaactttagctcaatcaaa gtatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtttgttgtagtatgtaggttcaaccattttt tcgttggttggggctcagtgtatacacataaaataaaggaaaaagaaaagaaaaaggaggtaatataagttggtaaaagt attcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnagcattattgacttgatgcctgaaaattctcagtactaattaattctgaattcagca gttcttagaagattcatggtattattagggagtttaagcaaccaagatgaccatggcaacaaaaacgcacaaatttgcat attattttgacaatgaaaaacagtatttttgcacgctttgtacgtgcatttttcatcttttgacattttgaagacattct ctttctttctacaacgtgaaatgacttgttttgcagttgtgtggacgacgtgagcatacaatgacaaatgctcaatttcg tcctcttatgtcccaaatgctggttccaattaaaatttttaattccaagatagttagaacacattgttcaagcataatga ctgaataattgaaaaatgatggcagaaatgcaaagttacattttcagatgatgatgttgattttgtcgacatcttgtttg cttaagctccctattgtggaggtgtaaactatgtcacacaagctaattacattttgtggcattttttactatctgcaggc aattacacgtgttagatgaaacctatgtcatgaatcaagtaagctttagtttttagtgtttaatcaatattatttatcac gaatcatatcattatgagtgactttccaactaatttatattgcgttcaagtaaactcaaccatactcaaaattatgtgaa tgttgttttaatagtttgcttttgttttgtttgttttttttattcaagtatacttttgcccagaggccacatttttatca gccagtgctgagctaagtgttaatcattttacctggtctggctggttccaacaaaacaggaatttttgaaatcaaagact ccctggctgtggtgtcagaagtttattgcattattgtatgaaataacttaaaacttttaatagatagcggtattagtgca aacacttcaattaaattagagcccgctctcgtaggaatataataacatggataaattagatgcacatcactcagatgctg ttcataagttcaattttactacaagaccttcatgttcagtggtgtccattgtctttacaggtcaaggaagatacctgcta tgtgtcagataacttcttcagggacatgcaatttgctaagtatgctagcaagaatttgtgactgtcttatttaatttttc ttaatttgtcaaagttgatcttctctgtgctgctctgtttgtgtcaaaatattacttgggtatcttgttccttactctgt cgtttctatgttttacatataggttgcgaggggctaaaaatactgttgtgagggactatgttcttcctgactatactcat atcaagagaggttatgttaaggtaggtagagttctaatctgttagatatactgtaccatgtcaaccattgagccgggcat ccagtttagttgtataaagcaagtcattataggggacaaaggtttccaatgcattaactggttgctagtcaagatgtttt aacatgtaatacagtaaccaggagaaattgaaggttttgatactatgtaccctttcccgtgtaagctactgttgaagaca ggaccaagaaaacaaatctgggttacttccacaccttgtaaagcatatgttatccctttatactcagtcataaaagtgga gaagccactagtacagtgtaggtgattcaaaagacagtgtttgcaattaaattaggttaagccaattcactctcattgat gaagagttagaagctgaaaataacaggtttagaattttccttttgagatcaatattattactgcatgtgtgtgctcttta caagtcttgtattaaacttaactattttccatcgtggcctaatggtcaaagtagttggggatataaggattgtattcttt gatcgaaccgataatttgtgacatgcatgaaatatcaactgtataatttgcttattaattttattggagtggttgtaaag ggccatcctacagcggaacaatgatgatgacagacatcaacactgatgattggagttccccttggtgctgcatgataatt tcttctggccttccagtgggattagctgtgactgtcacttggaaagtgccttcccctgaaagagccacattatttttttg actttttgaatggtaacttaatttgtgctgtactttcgttttagtcagcaacagagatgttacttggatctaaaaaggaa aacgaacaggtttgcgttcatgattattggtaaaaatgtgtttcaactttgaaaatggaggacccatgtaacaggtggag tggacataaaaaaaacccatgcgccattgtgtaaaactcgtgtccattaagtttgttcttgcatctgtgcaaatacagta gggagcaaatggctcaagtcagtgggacatttgggttatgattacaagagtgaaggcatctcgtttgagttttcccaatt tagggcgaaattgactgataaggaaaacttattggtgtccaaagagatgaacacccaactagtggactaatgcaaatcct gcattttgattggctacgctactataggtctattagtaaaagtcatcgagtagcaaagttcgccggttttgtaaacatat ttatttcgttttattcccaaataaatatatattttttgctgaatttattattgcttttttttgtccgactagttgggtga tactaaaacaattagacccttcgccctcaagggccgcggatcaatagcctattcggcttcgcctcatgggcttttaaatt gacccgtagcccgaaagggctacgggtctaattgttaattattatttccacgatgacttgttggatttctctaagaatgc ccaaattctcccagcataagtcgaatttatgatcgttcaacttggaagtgtgttgcggcgttgctgctggagatgacaaa ttattgcccttgtcgtttgccagaaccaaagcaaactgatgttaaccgaacttccttctctgaagagaatcgacataaac tgtcttgtgatgaagagggaactttctcaccactagctgatacttttgtttttctgtgtgatgctgttaggttttgcgca tgaacaatgagagatttgctgttcctgaactccttttccatccatcagatattggttagtctatcctgctccccatatcc cattgtgtctgacattaaacacttaatgactggtcccgaggggaacagtgaattttgtttcccgagaatctcaatgtctg cctcgacttcgtctcgcgaaactttgagattcaggggaaacaaaattcactgtttcccaagggaccagtgattaagtgat ttgttattttattcctagtatttctcatcttccttggaaccaacattattgacagtatcctcgtcctaaactcctgacac gaacggattgaagccaacaaacggttgacgctttacagtagtcttcattcgaagacgacttctatgtccctttgttttgt gtttatttttatagtaatgtggccaattgtccttgtatcagtatactctccaatgaagatctttggcatttgtttcaatt ttgtcagttaagatgttttgtagctttgttggtctaattgtgagtttgattcatttcaagcatttcctttttcaatgtat tcgttgtaggaattcaagagatgggaataccagaggcaatttctcacgcaataaacgagttacccacaggtattcagtaa cagtggcaggcacgacgaaaacaaaatggcagccaaagtgtagtccgtagccaaaaatatgcctgtacattgttagttat cttgggctgcagactccaatcgttgttccgggctcttttaacttaaacacctgccttgggctgtttccctcttcggtatt ctcgaatatgttttttctaatcattgaccctgaaaagcttagtcgatattgaaacacgaaatttaggtcgatgtttacat gtaaatgcaaaaagtattgaattttcaaccttaatgagctttgccgagtgaacatttcactcatccagctttcagcacca cagcttctttagaaagttatttagtcatccagcctgagagtgggaattgttcacttaagtctgtataaatgcgtgcgttg tcttcacataccatgcatttgctttttcttcagaaatgcaacctcattgttacatgaacatattgctgactggaggaagc tctctcttcccaggaatgaaagaaagagtgtatgtatccacgggtgatgcataagagatattttag |
Protein
Protein ID | aug_v2a.08483.t1 |
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Definition | - |
>aug_v2a.08483.t1 MAVLVLDNGASSAKVGYNTSENPRLIPNCIFKAKSERRKLFIGDQLEECKDYSGLFYVMPFQKGFLVNWDIEKQIWDYMF GKEVMKVDFPETTVLVTEPQFNFSSIKVXXXXXXXXXXXXXXXVCCSMQLHVLDETYVMNQVKEDTCYVSDNFFRDMQFA KLRGAKNTVVRDYVLPDYTHIKRGYVKSATEMLLGSKKENEQVLRMNNERFAVPELLFHPSDIGIQEMGIPEAISHAINE LPTEMQPHCYMNILLTGGSSLFPGMKERVYVSTGDA* |