Gene
Gene Model ID | aug_v2a.09039 |
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Locus | scaf3457 : 197 ... 3615 : + |
To GenomeBrowser | scaf3457:197..3615 |
Genes list of scaffold | scaf3457 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Trp8 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Mus musculus short transient receptor channel 1 (NP_035773). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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short transient receptor potential channel 5 | GO:0005262 GO:0016021 GO:0070588 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09039.t1 | gi|156396386|ref|XP_001637374.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.09039.t1 | gi|449679084|ref|XP_002158193.2| | 2.0e-31 | |
aug_v2a.09039.t1 | gi|699661720|ref|XP_009898694.1| | PREDICTED: short transient receptor potential channel 5 [Picoides pubescens] | 3.0e-31 |
aug_v2a.09039.t1 | gi|731263838|ref|XP_010601395.1| | PREDICTED: short transient receptor potential channel 5 [Fukomys damarensis] | 9.0e-31 |
aug_v2a.09039.t1 | gi|719735820|ref|XP_010225725.1| | PREDICTED: short transient receptor potential channel 5 [Tinamus guttatus] | 2.0e-30 |
Transcript
Transcript ID | aug_v2a.09039.t1 |
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Definition | - |
>aug_v2a.09039.t1 agaatggttcgcgttattttccaatttgcctttattagcattgtgatgctaacatcgttttcggttggaatgaccatgct ttactcatcgtcctttgaagcatatggaaagcagaggccacagagaaatacgactgacccaatacagagcttgcttagca aaggatatcacaggtaagttttacaagggtggtttaacacaatcatttcccttcaattgaaatctgagctcagatgttac aagaaagaaagacaactagatgattaccagcgaagtatcacagccaaggaaaattctataaagttgatttccgttcaatt gatctcaaggcacttttccattcgtaacctccttttaagagttgctgtagctgacaacaaattcccaaagtaaaaataaa atgagtttgtttaaaacgggaaaaagagaaagttcatatctattaatggaaagcgactccagcaaatgcggcaataacag ttgcagcatcgatcggtaaggttttcgggataaaaggtaggcgacggattcacgacgacggattcccgacaacggattca cgaatgactccacgaatgactccaaatgaattaggtcacagctttactttgtcaaagcagcttgaaaacgcctctaagtc ttgtttaagtattcgaatctggggggactgaaacaaaaatcttcaatactttgattttcagtctgatcgaaaccatggtg acgctgatgtgggcgagtttggacatgataacattggacagtcttgctgtgtttaaagaccaaagcttgattcagatatg gacggcaatcctgttcacgctgtatcatgcagcctcactcatcgtgctcctcaacatgttgattgctatgatgagtaact cataccagcgtgttgaggtaaaaacaagcacatttctacaaacggctgtccgcttttcttaaatgcacaaccagtgagtt gagccgtttataaccttacctggaaatccttgccttgcatattaagtgatatgagctattttgacctatacttgacccca cttgctaatccttgtcctccatgaaaagttacaaccggcaccacccaaatacccaaacggctgcttccatccatgaagaa agctccaaaagtctttttacgatcgtaacgatcaaaaacctttaaaagtactatctatcgttaactgcatggttatctgt taaaaatacacttatcgattatttccctggtaggataacattgaaacagaatacaagtttgctcgcgctcaactgtgggc cgactacatcggagacggagttgctaccttaccaccgcccatgaatctcattccatccccaaagaatatagtcaaatgga cgtgcatattcaccaacaagtgttttggagtccccaagaagcttccttgttgtgtaaatgtgagtagtacacataaacga aataacacgctggccatcgaattggtcaccaatcaacgatcaatggatcgatgaacgtgattgctgccaatcaggcactt tcactgtcattcaaagaagaattgtgagtgatataggttttgccagtgactcattgcttcgttatccataggctaaatga gcatcattccaccaatattgatttttgtttcacttcactcaaaacgaagtcaaattcaatttcagggaaaaggtattgaa gatatctcgacgcttcatgctagataacccaatcgaataataacaaacaatttattacggcagcgtgtaaatggtctcac atcaaaatggttcctgaggacaaagccgtctgctaatcacaagaaaaggccccgctcttaacctgaatccatgaaaacaa ctgttatctaaatgatatcggatatttccgcctcgcacgcctcattagctacccaaaaaatagtgcagatgagatgttca aagtattcttctaatttaccattattttacgcagaggaaattccgagtatatgaatcgcgaggcacagacgttgaacaga aaaagcagttataccaggtaagagtcaaccgatcatttaacaccgcaaccctttacggaagtgcacggcgaaagacccga agatgaattgaagtttttcggcataagcaaggaccttcttataacttacaaagtggcaggttttgatttcgttctagtca aaggcgttctcataatgatcaagttaccagatttccggtcaaacaatgactgcaaaaacttatgcgcggtcgccttcatg cggcgatctctagaaacagtatcagaaacgaaatatctagcgaagaagaccatttgattaatttcaacaggtttgctgcc taggttttcctttcttgagnnnnncagactttggttcaggcgagcacattcaacaaggcaaggaagaccgcgctgtgttc gcacgtgtccagtactttttgtttcagagtttttgtttttatggttcccagtgttccacggacgaaatttgctcataagc aattcgggtcaggggttatgtgtcataggtcaataaagataagttgattttttcgaagaagcatttaaaagacaggttct tcttattgagtggcagatatttagattctcgttcatgtaaaattaaaacactccagattgaaacttgcgatctaacaaaa acaaagcaggcgacccgtcattcaaagtattttttaaatcgaaatataaggcataccagtgcgggttctcgctcaagaac aattagaaaatgaggcctacatctctatttcaacctctgatatttttgttgttagaagttaatgatttattgtaccaatt gttagtaaatgcataaactaaggaaacatctttacgcgaatgacaaccaacgactaatcccaaaaaagggacctaaatcc cttcctatgagagtcgagaaagttaatttatgtttgatttgcgcttcagacagtcgtcagagacttaatcagtcgctatt gggcacgacgaaggctccagaagagtgcgcccaatgacgtcaatgctgatcaaatgagtgccatggaaacaatcagagaa gaagtgaaagatatgctgagcgagataagaaacatcctgaagacaaccaaacaaaacagaaatagagaaagaattcccaa aaccgaggaaatcgtctcggaggcaaatgtagattgtgtccactttccagttcattacgatcgcaaagccagcaaatctc ccgtcaaaaagttcaatcaacggacgtttgttcgatgattcgtttgattcttgacaaactttattccggactggagaatc atagaaggccaatggaaattttaatcatatcaagcctcgcaattaagtcaggaaattcgtcattaactggccttaccatg aaattcgaagatcatgtcatgtaaagttgaaaccattttaatgaaaaattcaatttgaa |
Protein
Protein ID | aug_v2a.09039.t1 |
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Definition | - |
>aug_v2a.09039.t1 MVRVIFQFAFISIVMLTSFSVGMTMLYSSSFEAYGKQRPQRNTTDPIQSLLSKGYHSLIETMVTLMWASLDMITLDSLAV FKDQSLIQIWTAILFTLYHAASLIVLLNMLIAMMSNSYQRVEDNIETEYKFARAQLWADYIGDGVATLPPPMNLIPSPKN IVKWTCIFTNKCFGVPKKLPCCVNRKFRVYESRGTDVEQKKQLYQTVVRDLISRYWARRRLQKSAPNDVNADQMSAMETI REEVKDMLSEIRNILKTTKQNRNRERIPKTEEIVSEANVDCVHFPVHYDRKASKSPVKKFNQRTFVR* |