Gene
Gene Model ID | aug_v2a.09165 |
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Locus | scaf3511 : 15006 ... 24902 : + |
To GenomeBrowser | scaf3511:15006..24902 |
Genes list of scaffold | scaf3511 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-DHC-f28 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. This gene model has AAA8, MT and AAA9 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09165.t1 | gi|676439713|ref|XP_009048942.1| | hypothetical protein LOTGIDRAFT_173233 [Lottia gigantea] | 0.0 |
aug_v2a.09165.t1 | gi|260811866|ref|XP_002600642.1| | hypothetical protein BRAFLDRAFT_102421 [Branchiostoma floridae] | 0.0 |
aug_v2a.09165.t1 | gi|699242087|ref|XP_009858468.1| | PREDICTED: dynein heavy chain domain-containing protein 1-like [Ciona intestinalis] | 0.0 |
Transcript
Transcript ID | aug_v2a.09165.t1 |
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Definition | - |
>aug_v2a.09165.t1 gcgatcgtctcttttcgcaagaacaacgcctctggttttcttcgctgttacgcgagacagttgaagagtttttctgctcg gatagctccgaagcggaaatggagattttaggtgaggagcaggaggaccttccgaagaatacatcaggtgggtgtatggt gatgcttgagtttacgagatccttgaagaaagtaatcatatatttgcttcaagaaagtggagattggtaaagtctcgcgt aagccgcacgaaagcctacctgggaatagcacatccttgattcacgagcatctggcaacggagaatgtagctaatcacgc tttgacgggatgctagtccttagcaatgcaaccccagttgatatggcacaggtcctccctcccctccctatgttcaatac cttaatcaccagtagactattccatcaagattgggctccgccgacaatctcaaacttacctcggtattctttttcgcaga gatatcctctggtacaaacgtcccacctctttctaccatggcggaaaaaacagaccatggggaagaatcagatgatgcca acggcgggcatgaagaggatgtggatgcgtctggaggcgaagatgaagatgcatcgaaggaactgggagatgagggattg attggtaagtaagtaaccgcgctagaagtatacgtctattcaagaaatagacagaggcgagagctgaatacacgcgcgag actcgtgggtgctccccacgcattgcgtgttctctcaggggtgtacgtgtttttttgcctgcccctatgtctcttgacga aataagagactactcgcagtctattcgataaacggtgtcctggttttcccgatatatctgtattgaaagtcgtatttgtt atcagatggtcccggagctgctattggagacgaacaagtggaagaagtagacgagcaaatgtctgaaatcgaagaagaca agttcgaagttgaggacgatcaagatattagcagggaagacacgtcgttggagagtacaacgggaggtcgctttggtaga aataaggtcactttcgacgacagaaacattgcaagcttggatgtaaagtacactggtccgctgatattgttcgagcagtt ggccttctcgggagaagatctcacagacatcgttttttgcaagcatttcaatgcctctgtgaccggcctggagagtaatg ctagtgaaatggccactaaaaattacttagagtgtggagacagcattctggagcaaggaattaatcgctgcctggcgtcc tacaacagtcaagttgctgaaagctccagtggtaggatcatgaacttggttactttccgtgaagctcttcggcatgccac tcgtttaagccgagctctggtaagacattgtcacaacttcggtatctcggtgttcaaaacgattattatctcaagaatct actgtgatttcataatttaatagtctgtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnagaggtatctctttcgaaactcacaattatacatttttgtttggttgtgactagaatgg atactccaaaatatggtgagacacttaattatatgtatataaagtaccaaccgatcttagtagtcttaccaaaggtttac caaggtgtaaccagaacaatttatgaaagctaaccttttcgagccggcgcttagacctaatcactagaaatcagtggctg acccagcagttattctctgcctaaatagggtgtcgtttatctgcttgcacctgtttatgtgtcacgaagtgtctcaccat attttggagtatccattccagcaataaccatttttgttttgaaggcaacacccggaggtcatgcgttgttgctatcgagt cttggttacggcagaaggtcgctgacaaaggttactgcgcacgcagcttgttataaggtgcgtattgatttgttaaaact tcatttcttcttttttctttccctgcgttttaatttccattgccctcttcttttgctcattttcttgctattcattgtcc tttccttctttgaccactctgcccctgatatttccagccctctctttgcgttccgtaactctatacaccttattccaaaa tggcggccaataagttattcttttctttgcatgttaattagccctcttcgcctcattttcacttcaaaattcttttgttt tatatacatgttgacgaggcaaagagggccaattaacatgcaaacaaaagaataatttattggccgccattttggaatag ggtgtattgagaacaagaagttctgttgcaagaggaatttgatcttttaagcagagattccagttgaaaaaatgctgttc tttttagtctatttttagctgttcgctgtcgtcgtcatcatcgggatcatcattacttaaccctaaacccaagtctctta ctaggaagtactaaaatcatgtcgacacaccgtggtatatttagtatctccagtcatgatcgacacagtagtacacttag ctaaagtaaaccaatatggaaagataaatggcttgttgcgaaagggactatcttactgtaaccgttatcgtcttattttt cccagtttattgaagtgcagcggagccagtttcagagcaaggatgacctcagacagcaaatcaagcttgcttcatttatc gccggcctacagggaaaatccgttgtattgtttgtgccagagggtgtggatgacgaatccatgcaagacatatgttcatt tatgtccgaaggtacacgaactcagtagcgttagtttttggtaattttattatatcgtgctggtcatgtcggtggtaagt ttcagaatgaacgactgaatttggaaaggaaaagttattgtattgccatcgtttataactgataaatgatcgatgcccct gcgtgctccgtttagatggttttgaagggcatcagaacgaaagagaccagaagaaaaaaaattgcttaattgcggctata actgagttcattcttaggggctaggtgtcaagggaaaggccgccatgtattgttttaaaccaaagtagcgtgaaactatg cttgattctccacctggttggttcgtgaacagtccattttcttcattttttttaccttctttcttaccttccatgcaggt acttgtcctgggctctacacacagaacgaactttccttgatatcaagtcagcttttacctggcggaaagcgtggcgcccg tcgtgcagaaagccaggacatcgcacaggatcgttacttccgacgcgtcaaatcgaacctccacgtcgtggtctgtctca agtacacacctcttcatctctccgcatctccagacaaaaaccaactctacaagtttccagctttggtgacaagaagctgt tgtgttgatatctatcgtgcttggcctcacaaagcgttgatcagtgtcgccgagaaagtgcttgaaaaagaagaaagtgt tttaaatcttctgcctttgaaaaggcgagaaagggacatgcaatcgtcgacgatttgttcagtaatggcgcaggttcatc tatcgtcgcgaaccatggtggagaaggtttatggctccagggcgctgaagttttattcgccagatacgtatttggatttc attgatctgttccggaagatctgtataagattatgcgttaaggaaaaggtgcgattttatttcattcatcatgatcattc atttttcttctccttggtttcgtcaactttgttctttagagtggtactaatttttatccttttgatcgtcattatcatgg tagcattagcaaccttcctgtaattttactgtttctgcatcctcgttaaaccaggactcttttaactgcaggaagaagca gctcatttagagaaggccatcaagagaattgacgaagccacaaacagtttgaacaagatgcagcgagaactggatcagtt gtcgcctgtgtttgaggcatcgaggacagatgtacaagtaagccaagagactgtagaagcctgtcagaaggaatacacta atgctaaagaaaagtgtaaaaaacaagaactggatattgagctcatgcaaggacccattgaaatactcaagaaagcagcg caggcggagtttgagaaggtgagtaaaaaaaacttatgtgaaaaaacgaatggaaaatttaattactataactgaaagat ttctcacgccgttattgagctgattatatcatcaatgaaaggacaaaaatatcaaattttgatttatgtaagccgatggc gtgataatggcgtgacgtaaaattaagtgacaaatttttcgatgcttgttgtcagtagccaatgatcgtgcaggatttgt tattggtgaagaattgctcctgtttgaataaacttcttgcattttcgtgtgttttttcctttaaccgaggaaatggaatc cttttattattttttctattgatgaaagccttcatctcccccattgcgtatgtaccgcagcaccgaagtagatggagcta tttttggaacgaaagttcgcgtgcaaagccacaaagggggcatgttcattcaatcaaacggctttagcatgatatcaata catctctcattagtatgcttaaacttaaaagttgaatagtggcggattcaaatgaaactttccggcgttcgtcttcgcat gaatttttgaggtcttctagcgactcatctgaggatgattcacgaacaataatgaaatgcggcccgtcagtttatggtat tatctgtttttggaacggctgttgctcgtggttaaatgaaaataatagcaatcacacgtgcagtttacttggttcataac cagtcagaagcgttgtggtcgtcaggcccaatctgattgggtattgtttggccagaccgttattttaaatttagataata tggtaaactagtgtgccaagaccaaatgagagatatcaagacttttcggttatgaacttctgccatagcttaaaagtaat agaagatgtaaagtacaatgctaaataacagtacttgaatgttgtttacccttccatctctcgctctgtagtcagatggt cagaaaacgggtctcaactgtggcatgacgtcaagtggaatgactctgtttgcaattccattctttgtaatgaaatggtg caagcattgaattttgataactgacaatgctttttgttgatttttttctgtctaaggtgaatcctctattcgatgcagcg tggagggccatcgattcgttaaacatatacgacgttgaagaaatccgcagctatcgcacaccacccgatcttgttagatt ggtggtgaatgcagtctgtctgttgtttgaaaaagagcagacgtaagtacacgcggtccgctcccatgactaaatactca aaaaggcaaaagagcaccgggtgtgcagctcaaactcaactttactggttccgagtcgcgtttaagcgcgcttagttcgg gagactcgagacgagtgtgacgtgttctccgaacttagcgtaagccgcatattttggccgctctttgaatgcattctttt aatttctttctttttaaacagatgggaagaagggaaacttcttctcaatcgactaaacttcttcaaggatttggagtttt acaacatgaagaatattcccgattctatattcaatggtcttcaactcttctatgacgacccgaagttccatccggaagtc gtacaggaaggaagtatggcagctaaatcgctgtgcatgtgggtgcgagctgtgtacgaattctgtttggtgtatcgagc cctggaaccaaaacggctccagcttgcgaaagctgaagcagagcttgaaaaggtagaacgttccgttggttgaaagtaaa agaagtcgctgtttgtctcggcaaagggttaaccgagagggttggggagaagcgaaaccaaaaaggtttagctgtaacga tagggatcttaagcaaagacgacttcgacgttatctgaaactgttacttcgcgtttctgcaatcatttctcaattattca aagttatgtgttttattatcctggaattgaactggaaccagcacttcaaagataaataagcataaagtgatcatttgtca tcatatgctcacgtcgtccacacaaatgcaaaacagttcatttcacgtcgtggaaagatcgagaatgttgagttaacgtt gtcatcattgaggaaattgtcaaagccaacgagtatggaaaaaaattgcaaaaccctccaagcagtttagagaaagatgc gtgggaatgggtcccgtcttaagagaaatagatctcatattcattccctcgttgatatacttttcaggctaagtcaattt taggagaaatgagagtgagatgcaacgccgtcaaacaagaacttgaatcaagtattcagctttacaaagatagcgtcaaa cattccaggagtgtcgaaaaacagatccaagtaagttaattggaataaattcaatgattcaggacgtggctgatagaatg caaataacagtttatgttaagatgagagggaagtgggaagcgtttcttaacagctcggcttccgtttatagcacaccttt aagtacatattaactgttggactaagaagtactcgaaattacgtgcatgttccactctgaaaaggtttccttccatttag tctgagcatcattcgctctaatgtagagaaaaacctcgaaacgccagcctataatcttttaacgtagcttcagcgcgcga agcaccattgataaggagaattggtaacacatcaagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnncatttcatatcattactattttaaagtttctctttctctgtctttgaattctcctctctttagcttctttgc ttcaatattagatttctctcgacccgatttttttttccataatttccgtgtttttcttgcagcacgtgaacttaacgtag ccttgcaaactgttctctttttagatatattatatttccttctattgtagaatataaactctcctccaccagttcaattt atttcaacaccggttatgaatctggcagagcaaaacttgctcatcgtacaagcggacgaccctcaaatcggtgcgtatnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnattagaatgcgtgagtagggaggtcgatagtgagcgaggtcagcctcgatcgagatgatttgacaaagacaaat ttgccttttcgttatatcttgtgtaatccattaattccctctcataatttttgcgcttgcagtgaacaagctgcacgcgg ccgtcaagaaaggcctggttaccttggtgactcatgtcgagagacgccgctgggagaaatccttggaattgctgttgctg cgacagactttcaccaacgcagacggaatgacactagtttttattggaaacactgctgtgaattatcacccgtcattcag gctttacctcagctcatcctttcctctctttacacctggcgagggacaatacccactacccttctctaaggtgtcaactc tctctttgtcactgagtcgagatggattgcgtgacatgttattggtagaaaccctgagacttgaacgacctgagtttgac agtcctctgaggtcagcggagagagacattagccttcacaaccaacagatcgcgcaggctaaggtagtgtaatatactac acgaaactacttcaaaaaaataatgagttaaaaaacggaaaaataatgagttaaaaaacggaaaacaaaaaacactgcga tgctgttgagacaatcgcaaacggagttttattaattaccacggcaaactcaaggaaagcaagcgcaatttgcatcactg aagcttctggtaattaaataacatctaacacccattctgttttcatgattttattgaaattggcgttaccatttctcagg caatggtaataatgttataattgttaaataagtgagaaacaagatctgattttgacacttacctcttcatcagggaccgg tttttcgaagcctggttagcactaaccgttggttaagaggtattaaaacctataggtttccatggtatttaaccctggtt agcgctaaccatgcttcgagcaacccgggccagatgaatatttcattgactttgttattataagaaacagcttttctgaa cttgcatttctaagttttgcacaaatattgggaaaccgagaacattctgtccagtgacgtgataacatcacgacaagatg caggtgtcgcttctcaggggaaccaggctatataattatattaaaacaattattcacctcggtgttggtgaaagcgttgg atatttacctcgccgtatcacggctcggcagatatccacctccacctcggtgaataatgaactttacctaatgagttctg atcttctgtaggaatccgtcctcaggaaagtggttgctcttagttcccctctgttaaaggactccagtatgaaagctgtg gtcatacagagcaaagaaatgatatcaactgcggaagagaggtgtcaagaagcagag |
Protein
Protein ID | aug_v2a.09165.t1 |
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Definition | - |
>aug_v2a.09165.t1 MAEKTDHGEESDDANGGHEEDVDASGGEDEDASKELGDEGLIDGPGAAIGDEQVEEVDEQMSEIEEDKFEVEDDQDISRE DTSLESTTGGRFGRNKVTFDDRNIASLDVKYTGPLILFEQLAFSGEDLTDIVFCKHFNASVTGLESNASEMATKNYLECG DSILEQGINRCLASYNSQVAESSSGRIMNLVTFREALRHATRLSRALATPGGHALLLSSLGYGRRSLTKVTAHAACYKFI EVQRSQFQSKDDLRQQIKLASFIAGLQGKSVVLFVPEGVDDESMQDICSFMSEGTCPGLYTQNELSLISSQLLPGGKRGA RRAESQDIAQDRYFRRVKSNLHVVVCLKYTPLHLSASPDKNQLYKFPALVTRSCCVDIYRAWPHKALISVAEKVLEKEES VLNLLPLKRRERDMQSSTICSVMAQVHLSSRTMVEKVYGSRALKFYSPDTYLDFIDLFRKICIRLCVKEKEEAAHLEKAI KRIDEATNSLNKMQRELDQLSPVFEASRTDVQVSQETVEACQKEYTNAKEKCKKQELDIELMQGPIEILKKAAQAEFEKV NPLFDAAWRAIDSLNIYDVEEIRSYRTPPDLVRLVVNAVCLLFEKEQTWEEGKLLLNRLNFFKDLEFYNMKNIPDSIFNG LQLFYDDPKFHPEVVQEGSMAAKSLCMWVRAVYEFCLVYRALEPKRLQLAKAEAELEKAKSILGEMRVRCNAVKQELESS IQLYKDSVKHSRSVEKQIQNINSPPPVQFISTPVMNLAEQNLLIVQADDPQIVNKLHAAVKKGLVTLVTHVERRRWEKSL ELLLLRQTFTNADGMTLVFIGNTAVNYHPSFRLYLSSSFPLFTPGEGQYPLPFSKVSTLSLSLSRDGLRDMLLVETLRLE RPEFDSPLRSAERDISLHNQQIAQAKESVLRKVVALSSPLLKDSSMKAVVIQSKEMISTAEERCQEAE |