Gene
| Gene Model ID | aug_v2a.09299 |
|---|---|
| Locus | scaf3553 : 11800 ... 15475 : - |
| To GenomeBrowser | scaf3553:11800..15475 |
| Genes list of scaffold | scaf3553 |
Manual annotation
| Study field | Transcription Factor |
|---|---|
| Gene name | Adi-HES6 |
| Description | Named thus based on a BLASTP search against NCBI nr and molecular phylogenetic analyses (NJ and ML). This gene model or EST assembled sequence corresponding to this genome region do not have either YRPW or WRPW motifs or Hairy Orange domain. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor hes-1-b-like | GO:0000122 GO:0000785 GO:0000981 GO:0001701 GO:0002085 GO:0002682 GO:0003151 GO:0003281 GO:0003682 GO:0005654 GO:0007155 GO:0007219 GO:0007389 GO:0008134 GO:0008284 GO:0008432 GO:0010977 GO:0014070 GO:0016363 GO:0021545 GO:0021861 GO:0021915 GO:0021983 GO:0031016 GO:0032403 GO:0035909 GO:0042491 GO:0042803 GO:0043279 GO:0043497 GO:0043565 GO:0045165 GO:0045687 GO:0045893 GO:0046427 GO:0048534 GO:0048568 GO:0048598 GO:0048715 GO:0060562 GO:0061008 GO:0070888 GO:0071347 GO:0071356 GO:0071398 GO:0071820 GO:0072028 GO:0090281 GO:0097066 GO:0097150 GO:1903026 GO:1990090 GO:2000978 GO:2000981 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.09299.t1 | gi|260813124|ref|XP_002601269.1| | hypothetical protein BRAFLDRAFT_127515 [Branchiostoma floridae] | 6.0e-29 |
| aug_v2a.09299.t1 | gi|632991021|ref|XP_007884436.1| | PREDICTED: transcription factor HES-1-B-like [Callorhinchus milii] | 2.0e-26 |
| aug_v2a.09299.t1 | gi|625211532|ref|XP_007646558.1| | PREDICTED: transcription factor HES-1 isoform X1, partial [Cricetulus griseus] | 2.0e-26 |
| aug_v2a.09299.t1 | gi|194222702|ref|XP_001498894.2| | PREDICTED: transcription factor HES-1, partial [Equus caballus] | 2.0e-26 |
| aug_v2a.09299.t1 | gi|625283404|ref|XP_007633379.1| | PREDICTED: transcription factor HES-1 isoform X2, partial [Cricetulus griseus] | 5.0e-26 |
Transcript
| Transcript ID | aug_v2a.09299.t1 |
|---|---|
| Definition | - |
>aug_v2a.09299.t1 ggtacttttcaaaatcgctttgctggtttacggctttagacagcgaaatagcaatggttcaagaatcctcaaagtttgtt aaagacaaggattccgaaacgaaaaaggtaacattcgctccattcgacgtttcgagacttcattttatttatttattttt gagcaccataaaagtaaaatgattgagaaaatcgaagtttcttgcagcttcttgtagattatctcgtcaatttccaagag taagtaaggatatatatatagtctggtattatgatatttacggatagctttaattatgacattatctgtttgtgttaaca gtggtctaaaccagtgatggagaaaaagaggcgagagcgaataaatcgtagccttgaagaattgaagagactggtcctgc aagctcagaacagagatgtaagtaccatgactagtatatgactagtagcattgtctagcgcaaagaggaagggttaaaga tcgaaaaaatactgttatatgagcacttttctctttttgctcgagcaatgctttagcttttgtcccgctgacaagtttaa cgaagtgctaaaattacttgttctgttcatgtatgaaaattgagctggtagctttgtgttttacgagtataggacactgt attttggcgtcttatttgaagtacttcgcattttctagaagtacctgagaagccgctctaattttacaaccgtcacactg aaactagtcacatttctggctaccctcaataaggactaatgcaagtttacttgccccattctttaggtaatggccattat acttcgaaagtttgcgaaagaagttaggaaataaaaaatgcgggtctcagcgttttcattcccgaagttgaacttcggag cattacataacttatttttcagtgttcaccgagcactagcttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttgttttcattcgtaggcttcaagatacaccaaactagaaa aggccgacattttggaaatgacagtctatcatcttcgtaatctgagacaccaaagagctggtgagaaattaatgacaagt taatgattaactgatcggtgttgagcagttttctgtcatggcttattatcactaaattgtttttaaaatcaacaatcgaa taagcttgtcaaattagaaaacggtgatcactggtgatagcaggtgaccgggtgaacatctggaaagacatatgaagcga tattaacctagctggggggaaagagaattgtgtcagaatagctttagagcctttcagacaacccttggcaaattcgtgat aatttatggatagaaattgaaagcgcttaaaatgcagaaagatccgtttggattgattgagatagtctttttgtccggta tggagtcatactttttgagattttctcgtgtaattgaatccccagtcgttctgtcgtcaagagaatgttttgcttcatgg tgtgacaaattcctttttcgtgttgtcgtgtattcggccgtgtcacaagtaaagatgtcgagttaaattctaattcgctg ccccgctcaaccgaatataaaacatttatcatgtaataagcaaccacttatggggtgtgtcaacacgagccatgtatgac cctctttattatgtcttgtaaatcaaaactgcctagaattatcaacaatgtctgcgcaaaataacaaaaactgaaataca atcaaacaaaaacgcgtagtgtatagcataagtttacaacaatctgattataagctagtataatgtagatacaaaacatg acaattcaatactagaaaatactaatcgaatttagtcattgggtatttaatttagagggtgaagaggcggtcgtatgact cgaatgaatacaaatgaagacaacgcagtatatataccgacgccccactaatggagcattgtgacaaagttacgtaaccc atgataaatacatttatgcctcgtgttgtcctatccaattcgtgtcgtggcagtcactaaatgtgaccagcggtcaattt aagtctccgtacatttcattccgcatacactacatatctaccaacatgaaaagacaaaaatggccttcagcacgttaaat tctccgtcaactaacggaattcttatcgagagaattcgatttctttaattgttggaatggttggaagtagcagttgtggt aatgatagcaaggaatcggattatggtttgtacaagttggatcaacttgtatatgtacacatatagagaatattttacgc atccactaagtgtcaaggatgtcctcaaacacggtgtgttcactgttgatttggcatagaaagcagacggactcaagttc gtcgatccagcaactgctacttttaagcattcaaataacaatattcagaaaacttgtttgcaaaagtgatgccagattac ggattcgagggtaaactaacttaggaatgttgagttgggctagtactggttccggagtgccattcaattgatttcgcttt ctcgtgtcccaagacaacagctgcttttaaggctagttgaaggcgatgggctacagtagatacaatcttgtactcggcca cgatattacgtcgtggagtcggatggcgtaatcgcaagtcaggagttacagcgtttctttcatgtcgcacgatgtgatat ttacgtcccgttctctttcttccacagtgatgtgctccaccgacccacatatgttgctggaatatcatgcaggatacagt gcctatattgctaaaatggccgagtgtgcggttggcgaagatttctgcgatcctgaagttagaacacagatcccttgtca aattgcttgttatcctcaagtggccactgatgtcggtcttcaatcttcatcaagaacccagaccgctgtacaggttgaga gctctaaggaaatcacagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtctcctttaggggttaa attcaaaatttccgacgagcatccccgtctgttccatataggattccacccccaccccccacccccccattgagaaagac gtctttggtcacgccaataacatctcttgaacttgatagcagcatttcattcaacgaagaaatgagagatttgatg |
|
Protein
| Protein ID | aug_v2a.09299.t1 |
|---|---|
| Definition | - |
>aug_v2a.09299.t1 MVQESSKFVKDKDSETKKWSKPVMEKKRRERINRSLEELKRLVLQAQNRDASRYTKLEKADILEMTVYHLRNLRHQRAVM CSTDPHMLLEYHAGYSAYIAKMAECAVGEDFCDPEVRTQIPCQIACYPQVATDVGLQSSSRTQTAVQGLNSKFPTSIPVC SI* |
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