Gene
Gene Model ID | aug_v2a.09306 |
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Locus | scaf3554 : 77118 ... 79080 : + |
To GenomeBrowser | scaf3554:77118..79080 |
Genes list of scaffold | scaf3554 |
Manual annotation
Study field | Signal transduction |
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Gene name | Adi-Frizzled4 |
Description | Best hit to EDO30865 predicted protein [Nematostella vectensis] with e=0.0 by a BLASTP search against NCBI nr. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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frizzled- partial | GO:0001568 GO:0005887 GO:0007223 GO:0007399 GO:0009986 GO:0010812 GO:0019955 GO:0030154 GO:0030165 GO:0030177 GO:0030669 GO:0031625 GO:0042803 GO:0042813 GO:0045893 GO:0046982 GO:0051091 GO:0060070 GO:0061299 GO:0070062 GO:0071310 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09306.t1 | gi|156353207|ref|XP_001622965.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.09306.t1 | gi|260834485|ref|XP_002612241.1| | hypothetical protein BRAFLDRAFT_269437 [Branchiostoma floridae] | 0.0 |
aug_v2a.09306.t1 | gi|291220968|ref|XP_002730495.1| | PREDICTED: frizzled-4-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.09306.t1 | gi|558143753|ref|XP_006092942.1| | PREDICTED: frizzled-4 [Myotis lucifugus] | 0.0 |
aug_v2a.09306.t1 | gi|512850112|ref|XP_004886965.1| | 0.0 |
Transcript
Transcript ID | aug_v2a.09306.t1 |
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Definition | - |
>aug_v2a.09306.t1 tcaccgtgaacgtcatatcctcctacaattcacataaagatgaactttttcttacacgttaggatttttgaaatgcgctt tgccaaagaattgggtatgtacttttcgtgtgaaccaatttagagtcaaagaagggataatcaagacagaatgcgtggag atcgaaggttgttccaacattagagcgagagaaacaataacagtcgatttcagctggcgcgagtgaagattcccggatcc accatgaagacgcccgaacatttgttgttgtttttcgtatttttgacaggtcttgtcgcctttagtcaaggattcaggac aaagggatggaagtgtgagaaaattacatcctctttttgcgataatctcgggtacaactcaactcgaatgcctaatatgc taggtcacgatactcagagcgaagcagaaaatcaaatacttcaatttgaagcgttggtaaaataccaatgtgcaagtcaa ttgaagtttttcttgtgttcggcatattttccgctgtgcacagaattggtagaggaaatggtcacgtcttgtcgcccgtt gtgcgaatttgtgcggaagaaatgtctccccgtacttgaagaattcggcgtttcatggcctggtaatctcaattgtagca agttccggagagaaaacaacttggaaacgatgtgtatggaggggccaaacattacggatgactcaagttcaaagccaact tcagtttttggcggcatcggatcagcaaatggtagcgaaataacgccaaggccagcgggaaagcatcatactggctctga acagtgtaggaaattcaagaacagcgacaattattattatgtgaaaagcacggaatcgtgcgctgtgcgctgtggtgaag aaggcatctttaagacttctgataaaagcagtgtggatacgtggatggcaatatggtcgatcgtgtgttttgtctgcact tttgctgttctttgtacgttttttgtggacacaaagcgcttcaaataccccgagcgatcaatcatttggcttacattgtg ttacaatctctatgccatctctttcatcgtgcgattggcagctggtcgcgaagcaatttcatgcgatcgagaaaccgatg gtcctaaatttcttatacaagatggtcttagaaacaccggatgtgctgttgtgtttttagtgcagtatttcttcggtatg gcagcgacaatttggtgggtcattttagccttgagttggttccttgctgctggaatgaaatggagctatgaggccattag ctcatattcgaacttatttcatgtcattgcgtggaccttgccaggcataaagacaatttttatccttattacgcgtaaaa tcgacggcgatgaattgactgggctctgttttgttggaaatcaagacttgatcgcacttgcagcgtttgtgttgggccct gattttacgtacttaattatcggcactctgtttttgatcgctggatttgttgcactgtttcgtattcgtgcaacaattca gcgagacgcgaccaaaaaaagcgacgctcacaaattggaaagactgatcgttcgtctcggcatattttcggtgttttcta ctgtgccagcaaccgcggtaatcgcctgttacttctacgaatacgcaaacaaagagtactggttttacggcaagcgagaa ggtagaatcgcagagccaaatctcggcatattccagttaaagatttttatgtccctctttgtcggaacgatctcagggat ttggatttgttcgtccaaaacagtacaatcgtggaaaaaaatatattacattttaactgcgaagagaccgcagcgtcaac tcgttcagaagaacggtggaactcgaaacgctagcgaaacaactgtttaaatttgtaattccactccaagaatcatcgag actggctaagtttcgtcctcgtttcctagaattgctcattcta |
Protein
Protein ID | aug_v2a.09306.t1 |
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Definition | - |
>aug_v2a.09306.t1 MKTPEHLLLFFVFLTGLVAFSQGFRTKGWKCEKITSSFCDNLGYNSTRMPNMLGHDTQSEAENQILQFEALVKYQCASQL KFFLCSAYFPLCTELVEEMVTSCRPLCEFVRKKCLPVLEEFGVSWPGNLNCSKFRRENNLETMCMEGPNITDDSSSKPTS VFGGIGSANGSEITPRPAGKHHTGSEQCRKFKNSDNYYYVKSTESCAVRCGEEGIFKTSDKSSVDTWMAIWSIVCFVCTF AVLCTFFVDTKRFKYPERSIIWLTLCYNLYAISFIVRLAAGREAISCDRETDGPKFLIQDGLRNTGCAVVFLVQYFFGMA ATIWWVILALSWFLAAGMKWSYEAISSYSNLFHVIAWTLPGIKTIFILITRKIDGDELTGLCFVGNQDLIALAAFVLGPD FTYLIIGTLFLIAGFVALFRIRATIQRDATKKSDAHKLERLIVRLGIFSVFSTVPATAVIACYFYEYANKEYWFYGKREG RIAEPNLGIFQLKIFMSLFVGTISGIWICSSKTVQSWKKIYYILTAKRPQRQLVQKNGGTRNASETTV* |