Gene
Gene Model ID | aug_v2a.09358 |
---|---|
Locus | scaf3569 : 38930 ... 43388 : - |
To GenomeBrowser | scaf3569:38930..43388 |
Genes list of scaffold | scaf3569 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09358.t1 | gi|585665607|ref|XP_006816964.1| | PREDICTED: F-box/LRR-repeat protein 13-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.09358.t1 | gi|556994533|ref|XP_006001237.1| | PREDICTED: F-box/LRR-repeat protein 13-like [Latimeria chalumnae] | 0.0 |
aug_v2a.09358.t1 | gi|528521484|ref|XP_001339819.4| | PREDICTED: leucine-rich repeat-containing protein 29 isoform X1 [Danio rerio] | 0.0 |
aug_v2a.09358.t1 | gi|632975098|ref|XP_007904037.1| | PREDICTED: leucine-rich repeat-containing protein 29 isoform X1 [Callorhinchus milii] | 0.0 |
aug_v2a.09358.t1 | gi|688616694|ref|XP_009296234.1| | PREDICTED: leucine-rich repeat-containing protein 29 isoform X2 [Danio rerio] | 0.0 |
Transcript
Transcript ID | aug_v2a.09358.t1 |
---|---|
Definition | - |
>aug_v2a.09358.t1 ttttaaattccttacagtgatgtaaccgtcgagggggaaccctaaacatgatatgagccatcacaccttgacttactggc tagcggaatacaccatcaatcaatatggcggacttgtgttannnnnttttgcagcaaaccagagctgtgtttgcaggctt gcagcgcaaaacccaaatgaaatctatttcatctcatgttgaaggtaaaacctgcaagttcaaagggttcgccctggagt ttgaccacttggttgacgaaactgatcacttcattgagacgttatgtcaaaagcggtgaacagaattgaacgttctgata tatcagctcttcccatagagatcatctcctatatctttagatttcttccaatatctgatataaaatgtgcagctcttgtt tgctgtgcgtggtcccgtgcagcagaagatcctatcctgtggagaaatgcattcatcagtctgggaacgagaagagaacg attttctaatgtactcgttgacagccttcagcgacacagtatacagtatttgaagttcaagcacatgtcgactgcagctc aaattatgcaggtctgcaaacagcttgggccgaatttaaaaactttgtctcttcaagggtgtagatgcgtcaatacctcg ttgctcgagtttctaagcaactgttgtcccaatatacatcatctggacttgagtcgttgtaggcagcttgatatgacaaa ggatgctagctggctcaacgactgtgcaattgtgtggaggcatcttactgttcttgatttaaatgcttgtaaagacattt caaatttcctggtgtcaaaaatagcagatacattgccgatgattgtgaatttatcaatttctggatgtaaaggtataaca ccatcaatatgggagaggcttgtgagaaaagttccttccttaaaattccttgacataagtcgatctgatatgacagatga aacaatgcataaattttctcagcttccacaacttagcctcaaaggaataaatttaactgcttgcaagcaattgacagaca gtggattggtatcattcattaagtaccagaattcagttgaaatcctcaaattggcatgcatggatataacaaacacaaca cttatttgcattggtaaacatatggaacatttaagagtccttgatctcaacagctgccgacaactcacagatgctgcagt ttcaagagtaaaaagccttttagtaaaattggaatcactgaacttgtattcctgttatcaactgtctaacaatggtcttt cccagttcctatgtgggttacaggtaattgattttcttaaatgcattacttgcttctatatggggtgctcttgcatgtct tctcctcatacattataagcaccaaaattactgccgactcccccattctgacctgcaatgctgatggcccaaaatcggaa taaaaacattttttaggtggaaaaacagcagatatgtcagaaaaagagttgagaacgttattgtgcattgtctaaagggt aaatttaaatgtttattttttggccttcagttcccctataagtttaaggaacaatcagatttcagcgcaagctgtgggac tgactgttgcattgaagtttgagctgatctctagctgagttaaataaagacaaactgacagttttttttattttttaaca cctaaagccggcagttgctcaaacaaggctgaaaagaataattatgattcaaataagatcgtgagtttgatgattgttac atttatcatcttttttaacacaggaaataaatcaagacattccactaagagtccttgttctaaatggctgcagctcatta tctgatgaactagtttcaagattttcaacagttttgctgaacctacaagaacttgatgtcagctcttgtcttcatgttac tgacattggattgaattcaataacagactctctggttcagttgcagtcactgagactcagttggtgtattaacatcacag acaatggtttattaggtgtcgttcaggagcaaaagcccgctcaaggaatgaaaatcaaccaaagcaaaaaggcaaggcag ggaaaacaagtgagcttaagaagctaccaaggcaagggcaatgaaaacgaaaataaacatttgagaaatggtgaccattt tgtgattattggttcttcctcacattctttattgttgacagagcatgctgaaaatggactgactggtagaagtgttgttg atatagagaatgaaagatttactgttgcatgttcatgttgttgctaaaaccttaaatttggaaatgtcacgttgccattt ggcagactacaactcaaagaattgtactaaaatgcatgccgcatggacagcacgattatttttccccattcaaccaatca aatcattattttctggtgtcatcattgccattgccatcgtccttgcttaagctcccnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnncaagatcattgtgaacattgccatttttaacactatttaagcaacagaatgggaaga cctgaaaaattcagaccttaacaggatttgaactgtaatccctgcgatgtgggtgcagtactttaccagttgagctatca ggccaactgagagctggtcatgataacctgttgaaaataaaagttgatttacaatatggaggagtcattgcacttttgca atccttgctgtaatttcaaacaccgcactgcatataacatttctttcatatgacattcctttcacgggaaaacatgagcc caacaaattgacctgctctccactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagacaattgcttaaattgtccagcaagtgcgaggatc atatcttcatttgattgtaatcataatgataccactcaagttaaaatttgaaggttcaaaaaaatgaatatgggccaata ttttgaaataagaaaaactaatagcatgaaaaaattcaacccacctacactgtaagcaaaaattattaatgttaactcaa gtagtggtattcagttaaagtgaccaataatattatctcccatttttagattctcaaaggaatagaaaaccttgggaagt tgcacagtttagacataagtcactgcacatgcatcacagatgagggactcaggagaatttgtcggctaaaaaaccttaca tttcttaacataaacatgtgtacacaggtttgtaaagaattcaacccttattctttcagnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnncaagggtaaagctatcagaaagaaatcaaattaaaacatagtgtgagtggta gtcttatcttattcctattaaccccttaactgccgaatgagcactcaggattttactctgtctaacgccagacgatttta ctcatcaatggggaagcccttggacgggaaagggttaaggtagaaacctcctgcatgcatctaaaactggaagcacgcta accatgaaccaattgttaatgaatggtcaaagatttaagggaaattttgatactcaggtggtagctgcatgatattctta ctgcaagaattaatagccatcaacattgtagagctacatcattaatgatgatacgttagcacacacttctaacacagatt taaaatctcagatattgtgttacaaatttttcattaagtatgaggagggcaaaacaagttgaagtttccttttttcagtt tcaaaaatacaatgtaaattaattttataacactagaattataacaaaaaacaagaggtcaatgtttggaatttatctgt tgcagattacagacagtggactgacagatgtagcagaaaatctacattctttggagcatctttcatttagtggatgtacc tcaataactgatgttggcttttcatccattgcagttgaacttgagcgtatggtggcacttgatgcagcaaagtgtgataa cattacagacaaaagcattgttcagctagcaaagcatggccacaatctgactcaccttgacctgagcatgtgcagtcaga ttacaacaaatgcagtagatcagctggaagtaagtattccaggtcttacatcgcttcagctgagatactctggagctcgg ctttcaaccaaaatgtattctatatgaatagtgtacctacattttgtaatttagaatttacctgtaataaatgttatatt ttaggctgtaattaaagaatttgagtgccttccagtaatcagatatgtagctgagtttgaataaccaatgattaagttgt gtgggtctgggcataagttcggaatttcctatagtgtaaattaaataactatgatccat |
Protein
Protein ID | aug_v2a.09358.t1 |
---|---|
Definition | - |
>aug_v2a.09358.t1 MSKAVNRIERSDISALPIEIISYIFRFLPISDIKCAALVCCAWSRAAEDPILWRNAFISLGTRRERFSNVLVDSLQRHSI QYLKFKHMSTAAQIMQVCKQLGPNLKTLSLQGCRCVNTSLLEFLSNCCPNIHHLDLSRCRQLDMTKDASWLNDCAIVWRH LTVLDLNACKDISNFLVSKIADTLPMIVNLSISGCKGITPSIWERLVRKVPSLKFLDISRSDMTDETMHKFSQLPQLSLK GINLTACKQLTDSGLVSFIKYQNSVEILKLACMDITNTTLICIGKHMEHLRVLDLNSCRQLTDAAVSRVKSLLVKLESLN LYSCYQLSNNGLSQFLCGLQEINQDIPLRVLVLNGCSSLSDELVSRFSTVLLNLQELDVSSCLHVTDIGLNSITDSLVQL QSLRLSWCINITDNGLLGVVQEQKPAQGMKINQSKKARQGKQVSLRSYQGKGNENENKHLRNGDHFVIIGSSSHSLLLTE HAENGLTGIENLGKLHSLDISHCTCITDEGLRRICRLKNLTFLNINMCTQITDSGLTDVAENLHSLEHLSFSGCTSITDV GFSSIAVELERMVALDAAKCDNITDKSIVQLAKHGHNLTHLDLSMCSQITTNAVDQLEVSIPGLTSLQLRYSGARLSTKM YSI* |