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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.09358
Locus scaf3569 : 38930 ... 43388 : -
To GenomeBrowser scaf3569:38930..43388
Genes list of scaffold scaf3569

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.09358.t1 gi|585665607|ref|XP_006816964.1| PREDICTED: F-box/LRR-repeat protein 13-like [Saccoglossus kowalevskii] 0.0
aug_v2a.09358.t1 gi|556994533|ref|XP_006001237.1| PREDICTED: F-box/LRR-repeat protein 13-like [Latimeria chalumnae] 0.0
aug_v2a.09358.t1 gi|528521484|ref|XP_001339819.4| PREDICTED: leucine-rich repeat-containing protein 29 isoform X1 [Danio rerio] 0.0
aug_v2a.09358.t1 gi|632975098|ref|XP_007904037.1| PREDICTED: leucine-rich repeat-containing protein 29 isoform X1 [Callorhinchus milii] 0.0
aug_v2a.09358.t1 gi|688616694|ref|XP_009296234.1| PREDICTED: leucine-rich repeat-containing protein 29 isoform X2 [Danio rerio] 0.0

Transcript
Transcript IDaug_v2a.09358.t1
Definition-
>aug_v2a.09358.t1
ttttaaattccttacagtgatgtaaccgtcgagggggaaccctaaacatgatatgagccatcacaccttgacttactggc
tagcggaatacaccatcaatcaatatggcggacttgtgttannnnnttttgcagcaaaccagagctgtgtttgcaggctt
gcagcgcaaaacccaaatgaaatctatttcatctcatgttgaaggtaaaacctgcaagttcaaagggttcgccctggagt
ttgaccacttggttgacgaaactgatcacttcattgagacgttatgtcaaaagcggtgaacagaattgaacgttctgata
tatcagctcttcccatagagatcatctcctatatctttagatttcttccaatatctgatataaaatgtgcagctcttgtt
tgctgtgcgtggtcccgtgcagcagaagatcctatcctgtggagaaatgcattcatcagtctgggaacgagaagagaacg
attttctaatgtactcgttgacagccttcagcgacacagtatacagtatttgaagttcaagcacatgtcgactgcagctc
aaattatgcaggtctgcaaacagcttgggccgaatttaaaaactttgtctcttcaagggtgtagatgcgtcaatacctcg
ttgctcgagtttctaagcaactgttgtcccaatatacatcatctggacttgagtcgttgtaggcagcttgatatgacaaa
ggatgctagctggctcaacgactgtgcaattgtgtggaggcatcttactgttcttgatttaaatgcttgtaaagacattt
caaatttcctggtgtcaaaaatagcagatacattgccgatgattgtgaatttatcaatttctggatgtaaaggtataaca
ccatcaatatgggagaggcttgtgagaaaagttccttccttaaaattccttgacataagtcgatctgatatgacagatga
aacaatgcataaattttctcagcttccacaacttagcctcaaaggaataaatttaactgcttgcaagcaattgacagaca
gtggattggtatcattcattaagtaccagaattcagttgaaatcctcaaattggcatgcatggatataacaaacacaaca
cttatttgcattggtaaacatatggaacatttaagagtccttgatctcaacagctgccgacaactcacagatgctgcagt
ttcaagagtaaaaagccttttagtaaaattggaatcactgaacttgtattcctgttatcaactgtctaacaatggtcttt
cccagttcctatgtgggttacaggtaattgattttcttaaatgcattacttgcttctatatggggtgctcttgcatgtct
tctcctcatacattataagcaccaaaattactgccgactcccccattctgacctgcaatgctgatggcccaaaatcggaa
taaaaacattttttaggtggaaaaacagcagatatgtcagaaaaagagttgagaacgttattgtgcattgtctaaagggt
aaatttaaatgtttattttttggccttcagttcccctataagtttaaggaacaatcagatttcagcgcaagctgtgggac
tgactgttgcattgaagtttgagctgatctctagctgagttaaataaagacaaactgacagttttttttattttttaaca
cctaaagccggcagttgctcaaacaaggctgaaaagaataattatgattcaaataagatcgtgagtttgatgattgttac
atttatcatcttttttaacacaggaaataaatcaagacattccactaagagtccttgttctaaatggctgcagctcatta
tctgatgaactagtttcaagattttcaacagttttgctgaacctacaagaacttgatgtcagctcttgtcttcatgttac
tgacattggattgaattcaataacagactctctggttcagttgcagtcactgagactcagttggtgtattaacatcacag
acaatggtttattaggtgtcgttcaggagcaaaagcccgctcaaggaatgaaaatcaaccaaagcaaaaaggcaaggcag
ggaaaacaagtgagcttaagaagctaccaaggcaagggcaatgaaaacgaaaataaacatttgagaaatggtgaccattt
tgtgattattggttcttcctcacattctttattgttgacagagcatgctgaaaatggactgactggtagaagtgttgttg
atatagagaatgaaagatttactgttgcatgttcatgttgttgctaaaaccttaaatttggaaatgtcacgttgccattt
ggcagactacaactcaaagaattgtactaaaatgcatgccgcatggacagcacgattatttttccccattcaaccaatca
aatcattattttctggtgtcatcattgccattgccatcgtccttgcttaagctcccnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnncaagatcattgtgaacattgccatttttaacactatttaagcaacagaatgggaaga
cctgaaaaattcagaccttaacaggatttgaactgtaatccctgcgatgtgggtgcagtactttaccagttgagctatca
ggccaactgagagctggtcatgataacctgttgaaaataaaagttgatttacaatatggaggagtcattgcacttttgca
atccttgctgtaatttcaaacaccgcactgcatataacatttctttcatatgacattcctttcacgggaaaacatgagcc
caacaaattgacctgctctccactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagacaattgcttaaattgtccagcaagtgcgaggatc
atatcttcatttgattgtaatcataatgataccactcaagttaaaatttgaaggttcaaaaaaatgaatatgggccaata
ttttgaaataagaaaaactaatagcatgaaaaaattcaacccacctacactgtaagcaaaaattattaatgttaactcaa
gtagtggtattcagttaaagtgaccaataatattatctcccatttttagattctcaaaggaatagaaaaccttgggaagt
tgcacagtttagacataagtcactgcacatgcatcacagatgagggactcaggagaatttgtcggctaaaaaaccttaca
tttcttaacataaacatgtgtacacaggtttgtaaagaattcaacccttattctttcagnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnncaagggtaaagctatcagaaagaaatcaaattaaaacatagtgtgagtggta
gtcttatcttattcctattaaccccttaactgccgaatgagcactcaggattttactctgtctaacgccagacgatttta
ctcatcaatggggaagcccttggacgggaaagggttaaggtagaaacctcctgcatgcatctaaaactggaagcacgcta
accatgaaccaattgttaatgaatggtcaaagatttaagggaaattttgatactcaggtggtagctgcatgatattctta
ctgcaagaattaatagccatcaacattgtagagctacatcattaatgatgatacgttagcacacacttctaacacagatt
taaaatctcagatattgtgttacaaatttttcattaagtatgaggagggcaaaacaagttgaagtttccttttttcagtt
tcaaaaatacaatgtaaattaattttataacactagaattataacaaaaaacaagaggtcaatgtttggaatttatctgt
tgcagattacagacagtggactgacagatgtagcagaaaatctacattctttggagcatctttcatttagtggatgtacc
tcaataactgatgttggcttttcatccattgcagttgaacttgagcgtatggtggcacttgatgcagcaaagtgtgataa
cattacagacaaaagcattgttcagctagcaaagcatggccacaatctgactcaccttgacctgagcatgtgcagtcaga
ttacaacaaatgcagtagatcagctggaagtaagtattccaggtcttacatcgcttcagctgagatactctggagctcgg
ctttcaaccaaaatgtattctatatgaatagtgtacctacattttgtaatttagaatttacctgtaataaatgttatatt
ttaggctgtaattaaagaatttgagtgccttccagtaatcagatatgtagctgagtttgaataaccaatgattaagttgt
gtgggtctgggcataagttcggaatttcctatagtgtaaattaaataactatgatccat

Protein
Protein IDaug_v2a.09358.t1
Definition-
>aug_v2a.09358.t1
MSKAVNRIERSDISALPIEIISYIFRFLPISDIKCAALVCCAWSRAAEDPILWRNAFISLGTRRERFSNVLVDSLQRHSI
QYLKFKHMSTAAQIMQVCKQLGPNLKTLSLQGCRCVNTSLLEFLSNCCPNIHHLDLSRCRQLDMTKDASWLNDCAIVWRH
LTVLDLNACKDISNFLVSKIADTLPMIVNLSISGCKGITPSIWERLVRKVPSLKFLDISRSDMTDETMHKFSQLPQLSLK
GINLTACKQLTDSGLVSFIKYQNSVEILKLACMDITNTTLICIGKHMEHLRVLDLNSCRQLTDAAVSRVKSLLVKLESLN
LYSCYQLSNNGLSQFLCGLQEINQDIPLRVLVLNGCSSLSDELVSRFSTVLLNLQELDVSSCLHVTDIGLNSITDSLVQL
QSLRLSWCINITDNGLLGVVQEQKPAQGMKINQSKKARQGKQVSLRSYQGKGNENENKHLRNGDHFVIIGSSSHSLLLTE
HAENGLTGIENLGKLHSLDISHCTCITDEGLRRICRLKNLTFLNINMCTQITDSGLTDVAENLHSLEHLSFSGCTSITDV
GFSSIAVELERMVALDAAKCDNITDKSIVQLAKHGHNLTHLDLSMCSQITTNAVDQLEVSIPGLTSLQLRYSGARLSTKM
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