Gene
| Gene Model ID | aug_v2a.09363 |
|---|---|
| Locus | scaf3569 : 88185 ... 91588 : + |
| To GenomeBrowser | scaf3569:88185..91588 |
| Genes list of scaffold | scaf3569 |
Manual annotation
| Study field | Transcription Factor |
|---|---|
| Gene name | Adi-HES7 |
| Description | Named thus based on a BLASTP search against NCBI nr and molecular phylogenetic analyses (NJ and ML). This gene model does not have either YRPW or WRPW motifs or Hairy Orange domain. EST assembled sequence corresponding to this genome region has Hairy Orange domain. Adi-HES1 and Adi-HES7 are aligned tandemly in the genome. Nematostella HES genes are also aligned tandemly in its genome, but relationship between these coral and Nematostella genes has not been elucidated yet because of low bootstrap values. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor hes-4 | GO:0000981 GO:0001701 GO:0002085 GO:0002376 GO:0003151 GO:0003281 GO:0003677 GO:0005634 GO:0006357 GO:0007155 GO:0007166 GO:0007389 GO:0008284 GO:0014014 GO:0016043 GO:0019827 GO:0021545 GO:0021915 GO:0021983 GO:0031016 GO:0035909 GO:0042491 GO:0045165 GO:0045685 GO:0045892 GO:0045893 GO:0046427 GO:0046983 GO:0048568 GO:0048598 GO:0051094 GO:0051179 GO:0051240 GO:0061008 GO:0072078 GO:2000981 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.09363.t1 | gi|657810111|ref|XP_008332360.1| | PREDICTED: transcription factor HES-1-like, partial [Cynoglossus semilaevis] | 2.0e-26 |
| aug_v2a.09363.t1 | gi|759195279|ref|XP_011384345.1| | PREDICTED: transcription factor HES-4 isoform X1 [Pteropus vampyrus] | 2.0e-26 |
Transcript
| Transcript ID | aug_v2a.09363.t1 |
|---|---|
| Definition | - |
>aug_v2a.09363.t1 ttttaatagggcggtctgtatgatgtctaagttctaaaaggatgtggatgttttcccacgctcattacaatgcccgaatt atcataaacaaaagcaagaacaaaggtatgtattgcattttagagctcgggaaaggcttggttcaattcagttgataacc ggttgaacttctcgcgtgctcctcaaaattttgagcgaaaatgaacgaggaggtgaaatcaaaagaatcaagaaaagtga gttgacatgcataacgtacaatgcgaccgtctttgctttcactgtaataacagccgagaatattcggggtcctttttttc aggcttctaagcccatcatggagaaaaaaagacgagcgagaataaacgaaagcctaaatgaactaaagacgttgattctg gaggccatgaggaaggatgtaagtattgtataataactagagttgttttcttcttatccgtaaaggaaaaattccgttcc gtccactcagctgttagggaatcacgtctgcattaattgacgaggtaaccttggagcgtttcatattcaaaaggcaaaga aaacattacagccgaatctttaattatctttccgaatagccttcaaatatggatgaacttaagtatatatgaatagaaag ttggaaaaatgactaggtcggaatcaggaaccaaaattctttgaattttcaagcacactcctttaaaagagacaagcctt tgcacgcccttctggcgttataaaatcccgctttttactactaaagacttttttccagttcccgaaaatgaatccatttc taccttttagcctgaataaaactaccactgcgacttttttcccccaaaaaatgtcgaaatgattactagaggtaaggtca tacctgcatgtcgagaagtgtacaacatagttgagaatggtaaaaattagcatcaatatcaaatgaggttttcactcttt ttcaaagaaagcaattcgaactcttttgatatgactagagtaaagatttcatttcctggaaaagtagttaaaagagtcca aataatagcatagtatattgttaccaaacttaatttgatcaacattagagatttctcgcaaaaaatgcactgccagttct aataaccgatcactcttactgtaaattactatcctagaattcatgttattccaagttagaaaaagctgatatcttggaaa tgacggttcagcatttgaagaatcttaaaaatcagcaagtttcaggtgagtggacgtcattgattgtttttccaagcctc tcagttgctatgatcgcaaacttgaattttacgcagcaatgtacccgcaataatcgttaacaagaaaatttattattaaa tttgtgggaacactagtcctccgttttcttcctccttcagtgttgattttatagcttttagtcctcgaataatttgcata caaatttaacaacaatgaaagaggaaacgaggatgttgttacaggagaatgctggatgttctgttttgaattgaacgtgt ctagtattatagcaagagtcctaagaacgcctggtttttgttaacttatgtcagatccttgtatatctagaatccgagga gactcaatccaaaacttgtttgttcttcctcacttttagattttccgcaatcaaatcaagcttcccttgctaactaccgt gcaggcttcaatcaatgcgcatcagaaataactcgattactgaccggcttaggaaatacagactctgccttacgaacaag gctannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnngtttaggtcaaacgcacattgcaaataaggtatatcaggaaattgagaagctctaaacttctgtgcagtt cgcaaaaaggcactcgttcaccttcgcatagttttcgtcgtgggtttttcttcgatctagctgtatcaacattctagcga gtaaaatagtaatgtagtgaaaaacatcagtctccttgcgcagaagtaagaaaagacctcaatggtagattgttcggcaa atgcactcatttcaataatgatttcgtttattttagtgttacttaagagtgtgagcaaacaacaactcaaataactcttt tcttttaacaagtgtttttcaggcccagggtggagtgttcttatttttccacccatttgaggctgaaatattcttaagac tactgtatgctttactttttaaccagcagataaattttattgtattttgcagatcttgaacgtgcaaaaatgtattctgg aaaaaaatcccaacctagggtacttacactttcttagaatttcggaaatttcagcctcaatattgttgtaaagaggattt ctttcttcgtttcactgctcgatatttcctttcgttgtttggagttcacggcgctcaatataattgaattctcatgcctc acgtaaattatgtttatacgatagctaaaaaagctttaaaaagttataaagtcgagaagacggctggtatgattttaagt gtgcccgaatttatttaattaagaagatagcatacaattttaagacaaagttataaatttatgatacaactcatgcaatt ctgtaactttttacctcgtgtttcatctcctttgcactacgttgctttaacgacgcttactttccttttctgagtgaaaa ggtaaattttaggccgcattttagcggcatttacctgatttcattgtggcgtgaattaataacatttcgtttgaaattaa ccatatagatctagtttaatggatcattaaaatcaaattttatgaagattatttataaaaaccagtgaatcactgctgtt tctaggcttcttctgtagccttattttccattttaatggaattgttttcgagttgagtggattgattttcaatttattat cagtggcctaactaactgatgaaatgttacgttcaacgaagattatatatcaataaagtcagtagttgtcgctgttgcca tgtggtgtgcaattcattcttgtccagaactgaccacacctctt |
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Protein
| Protein ID | aug_v2a.09363.t1 |
|---|---|
| Definition | - |
>aug_v2a.09363.t1 MNEEVKSKESRKASKPIMEKKRRARINESLNELKTLILEAMRKDNSCYSKLEKADILEMTVQHLKNLKNQQVSDFPQSNQ ASLANYRQTHIANKVYQEIEKL* |
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