Gene
| Gene Model ID | aug_v2a.09364 |
|---|---|
| Locus | scaf3569 : 92565 ... 94340 : + |
| To GenomeBrowser | scaf3569:92565..94340 |
| Genes list of scaffold | scaf3569 |
Manual annotation
| Study field | Transcription Factor |
|---|---|
| Gene name | Adi-HES1 |
| Description | Named thus based on a BLASTP search against NCBI nr and molecular phylogenetic analyses. This gene model has WRPW motif in its C-terminal region. This gene model has Hairy Orange domain. Adi-HES1 and Adi-HES7 are aligned tandemly in the genome. Nematostella HES genes are also aligned tandemly in its genome, but relationship between these coral and Nematostella genes has not been elucidated yet because of low bootstrap values. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor hes-1-b-like | GO:0001757 GO:0007219 GO:0021794 GO:0045664 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.09364.t1 | gi|156395390|ref|XP_001637094.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.09364.t1 | gi|260813130|ref|XP_002601272.1| | hypothetical protein BRAFLDRAFT_267120 [Branchiostoma floridae] | 0.0 |
| aug_v2a.09364.t1 | gi|37590864|gb|AAH59551.1| | 0.0 | |
| aug_v2a.09364.t1 | gi|260813118|ref|XP_002601266.1| | hypothetical protein BRAFLDRAFT_127513 [Branchiostoma floridae] | 1.4013e-45 |
| aug_v2a.09364.t1 | gi|612063284|ref|XP_007506403.1| | PREDICTED: transcription factor HES-1-like [Monodelphis domestica] | 5.60519e-45 |
Transcript
| Transcript ID | aug_v2a.09364.t1 |
|---|---|
| Definition | - |
>aug_v2a.09364.t1 cttagtgtgcgcatggatcattgttaagcaaccacataattagcttctaaacaacagttcgatctctgttattttgcaag tgaagttcctgtgagccaatcgctgtatttagttctcacgctctgattacccaagtttttttttataacgtatgttcaaa gcgttctcattggtgcaagggctgtgtacttgaaaatatctttaagattttatcaatacttgaaaatactcagaggactt aaagggaggaagaaaactcaacactgttttgccgtttggataactaaatgaaggcaaacgttagtgtggaaatggttctt gatggccaagcaggaaactcaattcatgataacaggcgaaaggtagcgtttgatgaactttcttcagaaactcacgaaat actttttcccatatttacaacaagacagtgaatgtgtgctgggattttcttttttcagtcttcaaaacccttaatggaaa agaggcgccgagcaaggataaatcagagcctaaatgagttaaaaaatctaatactagaagccatgaagaaagatgtaagt taaaacgacgtaagttagttatcgttagagggtacaatcactttttgaattcactcaaattttaccagcgcagcataaag tatgttgctgtaatttgttgcttctatcgtgtagtgaacgataaaatgcaggtataccgttcatatggtaaatcttatcg ttttccccttcagacttcctgttactccaagctggagaaagcagacattttggaaatgactgtgcgttacttgcgttcaa tgaggaatcagaacgtgacaggttagtcaatataaatgatcatctcggtgcccctgtcgggagactagagcagggtggtg gggtcatagggctgtacaatttgcatgtgcatttaggggagcatagataatacgggcgctcacgtcccaccagtatggat ccaactccattcccagtgtcagctagaacagatctctggatactccagttgccctctcttcttataaaacaaactcttac aaattccagttcaatctggataaagcaaacgacaagagtcacgaaaaagagagtgaagcaagcgttcgaaaaatcaactt catcgttccgatcgacttgatgatgaactttatagtaaggtgtctttttttagcggaaactgacaacatcggtgtactca tacataacatgttattttcatcagcttgtatgaatgccaatgacccaaacactgtagctcgctacagagcgggatataac gaatgcgccagtgaaatgacgcggtatctgatgtcattggatggcctggatcctcaagttcgcgcacgtttacttgcaca ccttgcttctttttgcacgccttgtggtccacttataaaaccaacaatgaccacgacagaacgtctgcagcagttacagc aaccccaggcaattactataccaggaataacccagccaatgggacctacaagtttcacaacgaatgtatttacagccaag cagacagaaataagcccagggagtctccttaacgctacacagtttcaaattattcccgcgcaattagcaaacggaaaaat agcagcagttcttgtgcaaagccaaaattcaccgctagcgatggtttccagcccgcagttattacccgtttatgataaag cattcccgtcacaagtttcaagaactgacaacgatcccctatggagaccttggtgaacaatnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnn |
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Protein
| Protein ID | aug_v2a.09364.t1 |
|---|---|
| Definition | - |
>aug_v2a.09364.t1 MKANVSVEMVLDGQAGNSIHDNRRKSSKPLMEKRRRARINQSLNELKNLILEAMKKDTSCYSKLEKADILEMTVRYLRSM RNQNVTACMNANDPNTVARYRAGYNECASEMTRYLMSLDGLDPQVRARLLAHLASFCTPCGPLIKPTMTTTERLQQLQQP QAITIPGITQPMGPTSFTTNVFTAKQTEISPGSLLNATQFQIIPAQLANGKIAAVLVQSQNSPLAMVSSPQLLPVYDKAF PSQVSRTDNDPLWRPW* |
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