Gene
Gene Model ID | aug_v2a.09615 |
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Locus | scaf3684 : 22725 ... 25755 : - |
To GenomeBrowser | scaf3684:22725..25755 |
Genes list of scaffold | scaf3684 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 55 |
Description | This gene model contains RVT_2 domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09615.t1 | gi|242081591|ref|XP_002445564.1| | hypothetical protein SORBIDRAFT_07g021665 [Sorghum bicolor] | 0.0 |
Transcript
Transcript ID | aug_v2a.09615.t1 |
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Definition | - |
>aug_v2a.09615.t1 acttacgtgaatcagttgatgaagaaagaaatggttgatggaatgaactatgcctcaggcactcaaacccagaaggaatg tgaggcatgtgttcttggcaaaatgcaaaagaaaccttttccaaagcagagccaacacagggcaaccagaccatatgaga ttgtacacagtgatgtatgtggtccaatgcaagtggaatcaaaaggtggtagtagatatatgcttacattcaccgatgat tattcacgatataccactgtttacttcatcaaatcagagaatgaagtactttcaaagttcatggnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnccaacagctttgccaaatgctgtaccgagaagggaatttcacatcagttcactgttc catactgtccacaacaaaactgctgaacggatgaatcgcactattatggagggagctagatcaatgctttaccatgccaa gttaccactggaattttgggctgaagcttgcaacacagcagtgtaccttcacaaccgaagccctaagcattgaaagatca aaccccatttgaatgcttgtttggtagaagaccagacatttctcagctgcaagtctttggctgtgtgagttatgtacaca tctcagataaccaacgcagaaaactagatgttaaggcccacaaagcaatttttgtgggatatcctcctggtgtcaaaggg tacaaattgtatgacctggagaagaagaaatttgctataagtcgagatgtttaattctttgaagataactttgatcattt taaggatggaccccctgtagatatgaagagcatatttccagatatgaacgaaggcagagaaagtgttccagtatttctct tgaatgaagaacctgcagttccagagcaagttcaacctccagctctaaagaatgaagaacatgtgatttcagagaatgtt aaaccctcagctcttagagatgttaaatctgccattccacagaatgttgaagcaatgggagcacacaatgaagaagctcc ggttaagagaacatataaagataaatttatggaagaagttcgaaacctaggaccagtaaggcagcgaagaaagccaatca gattccgagactgtgatgatgatgatgatgattgcctattagttaattcagtgatggaagagccgaagacagttcatgaa gcattgaacggtgaacaatctagtcgatggagagaagctatggagtcagaatattcctctttattgaagaatgatacatg gaatcttgttcctccacctgaaggaaagaacatacttggatcccgctgggtcttgaaagtcaaacatgacgagaatggtt ctgtaaatcgtttcaaacctagacttgttgtacaaggatattctcaagtgaaaggtgtggattatgacgaagtgttctta ccagtggctcaaaatacgtctgtgagatcattgcttgcgctagcaaatgcacatgatttggaaatacatcaaatggatgt aaaaactgccgttctgaatggctcattagactgtgagatttacatgtcacaaccagaaggattttttgatcctgacagac caaatcacgtttgcaagttgaagaagagcatttatggacttaaacagtcagctcgttgttggaacactactcttgatgag tatttgaaatcggctggctatcacaagagcaatgctgatggacgcatctgtgtgaaatccgtgaaagaagccaatgatcg catcagttttgtgatactgggtgtatacatcgatgatatcattccagtctcgaataaccctgtattgctgaaggcagaga aagctgcattatgtgaaagatttgagatgattgaccaaggtgaccactatctccttggaatgtctatcaagcgagacaga gagtgcagaacacggacaataagccaggccaattatgttgagagagtacttaggaaatttggaatggaaaactgcaaacc agtttctactccacttgatccaggaagaaaatttcggcagttatcacaaggtgatgagcccttcaatgttcagacctacc aacaggcgattggatgtctgacctatatgtcaacagcaacaaggccagatattgcagctgcagttggagtcttatcccag tatatgtcaggaccaagtaaagaacactggattggtgtgaagcgtggtctgagatacctcaaaggaactttgatgtatgg tctaaaattttatgctcatgaagaggaaccagaattatttggctacagtgatgcagattgggcaggagatgttgacactc gaagatcaacatcaggctatgtgtttcagatcagaagtaggacaatcagttggtctggcaaaaagcaggcaacagttgcc aagtcctccactgaagctgaatatgttgctttgagttcagctacacaggaagctgtatggctacgcagtttaatgggcga tcttggaagacaagtcgatgccccaactattatttatgaagataaccaaggagccatcgaacgccaaatatcataaccga actaagcacattgacatttgtcatcatttagttcatgaaagagttatttctaatgaaattcaagtgattta |
Protein
Protein ID | aug_v2a.09615.t1 |
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Definition | - |
>aug_v2a.09615.t1 MKKEMVDGMNYASGTQTQKECEACVLGKMQKKPFPKQSQHRATRPYEIVHSDDGPPVDMKSIFPDMNEGRESVPVFLLNE EPAVPEQVQPPALKNEEHVISENVKPSALRDVKSAIPQNVEAMGAHNEEAPVKRTYKDKFMEEVRNLGPVRQRRKPIRFR DCDDDDDDCLLVNSVMEEPKTVHEALNGEQSSRWREAMESEYSSLLKNDTWNLVPPPEGKNILGSRWVLKVKHDENGSVN RFKPRLVVQGYSQVKGVDYDEVFLPVAQNTSVRSLLALANAHDLEIHQMDVKTAVLNGSLDCEIYMSQPEGFFDPDRPNH VCKLKKSIYGLKQSARCWNTTLDEYLKSAGYHKSNADGRICVKSVKEANDRISFVILGVYIDDIIPVSNNPVLLKAEKAA LCERFEMIDQGDHYLLGMSIKRDRECRTRTISQANYVERVLRKFGMENCKPVSTPLDPGRKFRQLSQGDEPFNVQTYQQA IGCLTYMSTATRPDIAAAVGVLSQYMSGPSKEHWIGVKRGLRYLKGTLMYGLKFYAHEEEPELFGYSDADWAGDVDTRRS TSGYVFQIRSRTISWSGKKQATVAKSSTEAEYVALSSATQEAVWLRSLMGDLGRQVDAPTIIYEDNQGAIERQIS* |