Gene
Gene Model ID | aug_v2a.09678 |
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Locus | scaf3704 : 32816 ... 37103 : + |
To GenomeBrowser | scaf3704:32816..37103 |
Genes list of scaffold | scaf3704 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 9-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 9-1. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09678.t1 | gi|524880820|ref|XP_005097068.1| | PREDICTED: uncharacterized protein K02A2.6-like [Aplysia californica] | 0.0 |
Transcript
Transcript ID | aug_v2a.09678.t1 |
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Definition | - |
>aug_v2a.09678.t1 ctagcttcgttccaaccatagaatccttcaataatatcgtatgtgctattcatactttcgcaatgagcactagaaagagc agcaggagaaccaagcctccgattaaacttacggattacgaactggacgactctcaggaagcctctgcaacacctcagca aataagcagagcagtcacacgcgaactgagtcaggtcgagtcgatgataaaacatctttccccgacgaatgctattgccg agcagtccacagtaaatcaagacagaacgatcgaagacctccgaaaccgcaatctgcaacttgaactcgatctcacttgc accaaactcgagctgttgaaactacaacgtgaatcggcgcagagcagtccccccaagatcgtggcggccgctcactcaag atcttctggcgataatgccaccgcaaaaccaactttaaaagatcttcaccaagatcccaacgtccagtccgaactaaaat ctcttatggattctttgggagaaccagtgctagtaggcctgaccgatgaagagcaagatccggcacgtcagctgttggaa cgcaccccgtctcgaggtaaacgtcctttacttatccctgattttattagttcgctccccgtaatccttcaggaagacgg ggagaccgtgcttggaacctccggtgacgccaaaataattttaaaatcctctcaagaaaagaaaccctctctcgacaaac tttcattctctcagtggtcagcggctaactttcgtattatgcatatcctcatgaaggatggcctcctatcatccacccag gatatcttctaatatattttttgtacagttccaagatttctgaactcgccaaatgctgacctttctggtcaggttaccgc gtagttgttaagtcagacagtcaggtggccgctgctcttctaaacaaaggttcatcccgctgcccagtgatcatggcctg gattcgttccctgttttggcttaaggaatatttcagtttcagtttgtttgtcgagcacatcccaggatcaattaatacct tagcgtatagtatctcgcgccttgatgatgtgcgtcactggccagcgttccaagcatggctctccaagtcctctacatca cgggacctcaaacctcacatgtcggcattatctcttgcactccttagatccaaaggatgagcagcaactggaccgtgaag tcgtcaacttccgacgtcaagcttatgctcccactacccagtctacctatctgagtcagatgcgttcatatctctccttt tgtgtctattatggctaccaacctctcccagcagcaggatcaacactcaatcgttatgctgctttcctggcaagatcact atcagcaccttcaatcccagcctacttaaatgcagttcgcatcctacaccttgaacatggtcttactgatccaaccaaaa acaattttcacctggcagctacacttcgaggaattaaacgtgccaaagatgtgacagtgacccaaaagaaaccaattaca cctcaaatcctcttagctattcggaaccagttaaatctggacgatccttggcacgcaacattctgggccgtttgtttagt agcgttcttaggcctcctccgaaaagccaatctactaggtagaggttcaactcaattcaatccatcaaaacatgtgcgac gaggggacattgtcttctttgacgactgggccattgttatcaacagatggtcaaggacaatccaattcagccagcgcatc ctgaccatccctctacctcgcataccccagcaccccctctgtccttacaacgctcttaggcatgctttcaatttagtacc cgcccctttttcgggcccagcctttgtcgtcccagcaccaagcggcccgctccctctgacatacggaaagtttgattcta tgcttcaatccttggcagcagcaatgaacttggacccatctcaactcagtggtcatagcttccgctcgggtggggccacc atggcctttcaggccaaaattccggctgaactcattaaacgattaggggactggcaatccgatgcttataggtcttacat tcacatcccagttaaggaaagaatgctagcggtaaggcaattggcctcgtttgtttagtttccttgttccttagtttctc tcgtctgggattaggtcgtgcctcccttgggcaatgtaaataaacggaaggatccgtacaggattccttccctgttcacc ccagacgttgttgtagttatttagtctatttaagttcccccttttgaacctgagttaagttttgaataataggcattatt tgtatttaactacagtgagatctggggcgagtttgctggcatgcgttgtgttcagctcgcctgccatgtgcttttacaca acctagcttcgttcccctcccttttcctttcctttttagttggtgttagcttgttccttctttctcatgttgggcaatgt aaataaacggaaggatccgtacaggatccctttcctgttcaccccagacgattcctgcagacgatcgaaatgaaattcac ttttggagactctaagaagttcgctaatgttcatatttttgaagctatcaaggaagaacccgatgctcgtgtggtggaaa tctcgggtatagtgtcttgggaaaaacccagcctttttaaagaaaaatctcgttttcttctgtaaggtcgtcttcgtttt tgcgttccattttcataccagccggctttaaggtctcagacgttaaattcgtcttgacgacttttatttaacttcataaa aaacggccattctctaatttttacaggtgcatgaacgcccgaagatgcaaaacaacttttttatgtatttcagttcttca atttttttaatacgtgcgagatctaacgtaaatcctgcgtagaaaaggtttcaaatttgtaatgtttaacgttaaatcgt gagccccaaaattaaattttacaaatcttacaacttttctacgcaggatctacgttatatcctgtacgtttttgctgttc acaccgttactggaacgcgcttttgtaccattaatttctgtataaaactagtttcctttatacatctggttagaatccct gatgaggtctgtttgatcagacgaaatcggtcggataataaccaaagttaacaagatcagttcctgtgtgctgctcacta gtctccattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntt cactggtctccaatgaaaaagaattaaataaaaaatacatttcggaagtttggtccactttggcctatttagcacccccc cccccccacataaaatcctgcttacgggcctgcagtaaacaagaccctcaagtcttatggaacagttaacaaagtcgaag tcatagcgaaattctggtccaaagtggaattaggagtcaaatccctaacagatgttgaatttcttgtcataaaaggcaaa ggcaggcctattcttggaaggaaaacagcaatgaagcttggggtgttgaagatcaccataccagaagtcaacctagtgga ggatgagttccaagacctgttcagcgagaagataggaaaactgacaaattatgaagttgaattgcatcttaagccgaatg ctaagtttctggcgcaaccatgcagacgaatcccttatagccaaagaagaaaagtcgaaaagaaacttacggaactagag gatatggacatcatcgagagggttgaaggtccaacaccatgcgttagccccatagtggttgtcccgaaagaaagtggaga catcagaatatgtgtggatatgagacaggttaacacagttatagagcgttcaagacaccctattccaactattgatgatg tgttgagtgagctcagtggcagcactgtgtttacaaagctagatctcacgatgggattgcatcaactagagctgaaagaa ggcatctcaagagacgtgacaaccttcacaacacatgcaggcctatttagatacaagcgcctgatgttgctcagcaccgg acttgtaccaacatgtgatcagtcaagttctacagggtgcaggatgcactggatgtcggaatatatcagatgacatagtt gtgtatggtaaagacgtaacggaccatgatgagaaactgcgaaaggttcttcacacacttaagcatagaggcctgacact taacaaggcgaaatgtatcttcaggataaatagaattgagttcatggg |
Protein
Protein ID | aug_v2a.09678.t1 |
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Definition | - |
>aug_v2a.09678.t1 MSTRKSSRRTKPPIKLTDYELDDSQEASATPQQISRAVTRELSQVESMIKHLSPTNAIAEQSTVNQDRTIEDLRNRNLQL ELDLTCTKLELLKLQRESAQSSPPKIVAAAHSRSSGDNATAKPTLKDLHQDPNVQSELKSLMDSLGEPVLVGLTDEEQDP ARQLLERTPSRDPKDEQQLDREVVNFRRQAYAPTTQSTYLSQMRSYLSFCVYYGYQPLPAAGSTLNRYAAFLARSLSAPS IPAYLNAVRILHLEHGLTDPTKNNFHLAATLRGIKRAKDVTVTQKKPITPQILLAIRNQLNLDDPWHATFWAVCLVAFLG LLRKANLLGRGSTQFNPSKHVRRGDIVFFDDWAIVINRWSRTIQFSQRILTIPLPRIPQHPLCPYNALRHAFNLVPAPFS GPAFVVPAPSGPLPLTYGKFDSMLQSLAAAMNLDPSQLSGHSFRSGKGRPILGRKTAMKLGVLKITIPEVNLVEDEFQDL FSEKIGKLTNYEVELHLKPNAKFLAQPCRRIPYSQRRKVEKKLTELEDMDIIERVEGPTPCVSPIVVVPKESGDIRICVD MRQVNTVIERSRHPIPTIDDVLSELSGSTVFTKLDLTMGLHQLELKEGISRDVTTFTTHAGLFRYKRLMLLSTGLVPTCD QSSSTGCRMHWMSEYIR* |