Gene
Gene Model ID | aug_v2a.09986 |
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Locus | scaf3821 : 36289 ... 40495 : - |
To GenomeBrowser | scaf3821:36289..40495 |
Genes list of scaffold | scaf3821 |
Manual annotation
Study field | Cytoskelton |
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Gene name | Actin Domain Containing Gene12 |
Study field | Flagellum |
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Gene name | Adi-actin6 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Chlamydomonas actin (XP_001699068). This gene model seems to contain almost an entire ORF of the gene. This may be an actin-related protein. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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actin- muscle-specific | GO:0000166 GO:0000281 GO:0005200 GO:0005875 GO:0005884 GO:0005886 GO:0007507 GO:0050807 GO:0051297 GO:0051533 GO:0098529 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
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aug_v2a.09986.t1 | gi|195329254|ref|XP_002031326.1| | GM24109 [Drosophila sechellia] | 0.0 |
aug_v2a.09986.t1 | gi|260821503|ref|XP_002606072.1| | hypothetical protein BRAFLDRAFT_56687 [Branchiostoma floridae] | 0.0 |
aug_v2a.09986.t1 | gi|498969101|ref|XP_004526477.1| | PREDICTED: actin-2, muscle-specific [Ceratitis capitata] | 0.0 |
aug_v2a.09986.t1 | gi|557758542|ref|XP_005178998.1| | PREDICTED: actin-57B [Musca domestica] | 0.0 |
aug_v2a.09986.t1 | gi|557761720|ref|XP_005180578.1| | PREDICTED: actin-87E [Musca domestica] | 0.0 |
Transcript
Transcript ID | aug_v2a.09986.t1 |
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Definition | - |
>aug_v2a.09986.t1 gtaagttgtctttctccatttcgttaatttactttgtcgacgattatcgttatttggttgtctatgtagaatgtcatcca ctaaacctcccatagtcatagacaacggttcctactcaatcaaatctggatttgccaaagaagaggaaccctactcggtg attcccacaatgctcggtcaaacgaaggaagcaaatcgacaggaggttctcgatcgaccagcgccatacatcggagagga agctgatgagaagaaatgtgaactagacattacatatcccgtcaaaaattcagtgataactgatttccatagtatggaag aggtaagacaacccatgatgaaaacaaacctttcgttgtgtatgttttttaaggaatcgtgacattttaaatattttatt atagatctggagttacatttttggtaccaagttacaagtgaaaccggaggaacatcctgttttgctgaccgaagctcctt tcaacccgatagcaaacagggaaaagacaacacaggtatagttccggaactttccatgggctgagaagggctttacgaga tcaaagtaagaaatctactgaagcttgttctgtcacgcatttgtcgtgattgttacatcacgcaatcaatctttctgtcg gcctcggaggaaagattgcttcatgatccttgagaggatcaaccactgactattttatttggctaaataaagttgttgtt gttaggactctaacctttcacttcgagtacgcctttagttataggtagaggattttacgagaatgccatatgataacgtg ttttgtcgtccattccgaggaatttctcagtaactcctttaataagcaaattaacttattaaagtgcccatgacgatttt ttaaattttctcatctgaatctaaatatcatcattaaaatttttttcgtttgaatgaaatttttgtacaacttttgaagt tgccacaactttgttgcattatttattttgcaatttacaacaccgcattcgcatcagtctcctcttggtttaacagaggc gattgctctaaaatttaagcctcgttatcagagttgaactgagataaaggattaagattctcgatttagaagtcaccgac ccggtgaagactctgccctccttcattgctcgcaatgaagaaaacacgagtattaattttgctttcttaggttatatttg agaccttcgattcgcctgccatgtacttagccttagctccggtcctggctctttatgcttctggtcgtaagagtggcgta actttggacagtggtcatggaagcaccaattcagttcctattcacgaaggttttgctgttgtcaagaacatccttcgtgt tgacttgggtggtgagtacttgacagactacctcaaaacgagccttgtggaaaaggatgattcgcttgccggtgtcagtc gagaagtcgtgagagatatcaaagagagcctttgttacgtgagcttggatttcgaaaaggcgatcagtactgcgacatca agtccaaagttagacaagaattacacgcttccagatggtcgagttatcaccattggtggagccgagtgtatccggtgccc agaaagtttgtttcatccttcatcggctaaaaccggtcttactggaatccatgaactcatttactcttctgtcttgcagt gtgatgaaggcatacagcaagagctgctcgcaaatattgttctggccgggggaaacaccatgtttgaaggaatctctcaa cgaattcaggaggaggttgctggtctcgccccaagcaccatcaaaacaaaggtcattgctgcgcctgtnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnngttatactttggtcgtcatcttagactgactgacacacttggcctgtatctcatgcgggtatcgatccgatg cctgataaggtgaatttagactacagtatgtgaaactgctctattgtgaatatcaaaagtacgaggttattaccatgtcc gtagtcggtggtaagccaaaaaaacacgcaaatcccagttataaagcaacaaatcacatcgaacgcacttttctaatctt tgattattactagtactatgattagcaatgttccgttgaataacgagactgaccgctgagaggtgacttgcagttggttg ataaaaaggggaatgcaatctttcgttctattgaaacaactctgcgtagcgtcgctaacatcaacttattacaacctaag ccatcttactagcagtcgcattttttaaaagtcaattaaccgtggtgttatgttaaatcatgatgttatttaaaacccgt gccaccatttcgtattcgtcactgttttcggtccgcagcatcgacactgccaggtcattgtagtaaaggggacactggct tcgaactttgacacagcttctcttcttataagcgaggcatttgagtctgaggagagcgatgaaagtaaaatagacgtccg ttgattttcattctagtaataacccaggggaacaagttttggtgaaagttgtcacggttaaaaattcatcctttgatctg tggctattactatcaccatgccagttcttgtgtataattatcatggagacacgtttgatgattgacaagaaacatttgaa atattaaccctgattacgcaagactgacctcgtgttgggttaagatatagagttccagttttgaataaggacaatgtgac aagcttcactgaatgtgactcaggatttttacgctttctttctacttacgaatgccaatgttaatgaggacaggcttgga caaatgtaagttgaccattgtgccaaaataacacgttattgaggattcttgtgattttctactcgatagtatgaaatgta ccccggataaacgctctgagagcgtcttgttcatctttacgtcgatcaacacaatacaactatgaatcgattattcactg tcagaaggtcgatatggtgaaaaaaaaaacaaaacaaaacatttcag |
Protein
Protein ID | aug_v2a.09986.t1 |
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Definition | - |
>aug_v2a.09986.t1 MSSTKPPIVIDNGSYSIKSGFAKEEEPYSVIPTMLGQTKEANRQEVLDRPAPYIGEEADEKKCELDITYPVKNSVITDFH SMEEIWSYIFGTKLQVKPEEHPVLLTEAPFNPIANREKTTQVIFETFDSPAMYLALAPVLALYASGRKSGVTLDSGHGST NSVPIHEGFAVVKNILRVDLGGEYLTDYLKTSLVEKDDSLAGVSREVVRDIKESLCYVSLDFEKAISTATSSPKLDKNYT LPDGRVITIGGAECIRCPESLFHPSSAKTGLTGIHELIYSSVLQCDEGIQQELLANIVLAGGNTMFEGISQRIQEEVAGL APSTIKTKYEMYPG* |