Gene
| Gene Model ID | aug_v2a.10262 |
|---|---|
| Locus | scaf3936 : 2077 ... 6505 : - |
| To GenomeBrowser | scaf3936:2077..6505 |
| Genes list of scaffold | scaf3936 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lipopolysaccharide-induced tumor necrosis factor-alpha factor isoform x2 | GO:0044424 GO:0050896 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.10262.t1 | gi|291239466|ref|XP_002739641.1| | PREDICTED: lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Saccoglossus kowalevskii] | 1.0e-30 |
| aug_v2a.10262.t1 | gi|543735101|ref|XP_005508527.1| | PREDICTED: lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog isoform X1 [Columba livia] | 7.0e-29 |
| aug_v2a.10262.t1 | gi|156374443|ref|XP_001629816.1| | predicted protein [Nematostella vectensis] | 9.0e-28 |
Transcript
| Transcript ID | aug_v2a.10262.t1 |
|---|---|
| Definition | - |
>aug_v2a.10262.t1 tcggtaaatatcaaccactattcacctccacctcagtgaataattgtcaaattatcagtggcttcgtctgcctcttgcgg tcgcttccgacagtaaactagagaaagtggttttcctgtgtaagacctaaagtttttcacgtggaggtctggttaccagt aaaagttgaaatcacgagacatttcatcattttcagggaaatcgaaagtttttgtacaaaattattcagcgaccaaacaa catggcagacccagggaaacctccgccttataactatggtgctattccgactgattcggggaatcagcctccaccacctt atcctgccacaggtataagaaaattcaaatgtttcaaaatgattgaacccgaggcaaacgaggaaatgaaagtctcttag ctcagcttcttggagttgtggtgcaattttggccactgtcttaattttcaagatttcgttcgatttcctttttcattatc tcttagacaaaggttataactttccccatatcgatgtgcaacagtgattaaaattgtttcccatttttgtgaagcaagta gtattttaattatgatcgattttagtcgaggtgatcactacttccagaggaagtggctgcgtgtttcttaattagaatat catttctaccaggtgtaatatgtggctcatctaaatgcggaatgtttcttatgtgaaactccgtagaaacttggcttccc cttaagttttttggacgtcgtatcagtggttgttagaattaatattatcctcatttcatttccacgactgattgcaagag tattgggtagaaaatgaaatcattcctatatttaaggtgaaaaattggttattaaacttccttactgctgggaattcgtg tctgagtacccgagatgatttggcaacatatttgtcaatcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn naagtcaagtgaaacatgcataaacccttgcttatcatatgatggtttttattatccctaatgactggtaaaacaccact atagttgaatattgattatccaaacttgcaggctatttcagcctaaattctacagctaatagataatataaacaccagtg agcccataagttggagagatggatttaatgcacgcaagtataagtttgatagtgcaattgctggccattttgctaacatt caagggctgcttgctcgatgtatggttagtgctgaccattggttaagaggtatagaaaccgatacatttcaatggcagtt aacattggttagcgctaaccatgtgcgcatgctttgagcaactggggccagtttgctataagctgttttgctaacttatt aaaaattctggtcaattcttgccaagagtttttttcttagtttgagtgggtccatttcagtgactaggggtaatgcttga agtgtccagtttttcaaaaggtagttggtgttaatctgggattaaacaacaaacgtggtttgaattttgctggtctgaaa ctccataactgtgcaaattttaacttacagaaaataaaggtctggttgagaacccaaggaccaaagtgctgtgaaaatct ttctgggttttcaaggaaaaaataataattgttattatttccaaatttttggctaaacttggatttgttttgtcagggtt taacaactggtaccagatggatatttgaaaatgtaccacttgcattttccttctggttttcagtgatattgtagtttatt ggcattcactcttcctgataaataaatgaattatttatcattttattcatgattgtttgtagtgggctttcaaggtgcag gcaagcctgagaattacatgccacctccaacacacccttacccacaaccacaaccctatcaatgtccacctcagccagca acaactacaactatcattgcacagccagcacaaacagtgtttcttaacatggtttttggggaatcccctgtcagcatggt ttgtcctcactgtcacacccatatcatcacgtgcacaacttatcaagatgggacattgacgtggcttgcaagtggggcac tttgtctgttggggtaagccattacagcaatatagtgaattttcaattattggttcactgggataataaactcatgtact atgttgaggaggtggagaacatgagaaaaagcttgtattcaatgaaaggttgaatagtgaaatgatggttgcttgacagc catcatttcatcatcaccaattcctacctggaagtctgaaaatcttttcagtagttctatcacccattgccaagcaacca tggtttttgagtgttctcctagcatctcccattggtttattacccaggttagccatagaaaatgtggtgtattgattttt tattaaaaactggatcattggataatgcaattcaatactttttatttgcttagccatcatggtatatgagccaatatacc ataatctccaaaatatagtaagcgtacgagtcagcttaaatttaaaaaggagctaaaaagttttccctcaagaaacaact gcggctggcgaaaatcccttcgcaccggagttgaatgaaaaggaaatcattgaaatattagaaaatgcaaggtaaaaact tgaaaactttattttgacaatttaagcatctgagatagtcaaagcaaaacattgcaagttgagacaatttactcatttaa aaattatctgtacattgtaacattcagtttcttctcacaaaataaagtcgagaagatttgtgtaatatcttgggggtgtt tttaatagaacaataattattattctactcgcgcttgttggatatgagatgattgtagccaactcgcgtgctgcgcacct cgttggctatctattatctcatatccaacatgtgctcatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtga gattaaaaaaggagaaaggagttctacaagaaaatatggtatttaatgcagagatggtctgtcttcactttacattcatc atgtgacatgtgatagtgattgatgtaagcataagtttaccagcacaataaactcggtataggtttttgaccaatcagac agtgcatagtaactcggcagtattattagataataatagctgttaagagaatcacatgattctaaatgcaaatggtttaa atctaactaccacaagtaattttcaaatgcaaattaaattgcacaagtcttgtgctacaaaccacttgtacattttggtt ccacgatgcagactacatgtatgtactagcatataattttgtgtaggcaaaaaaagtaccagctaaagagacctattaat aatttttttggtctctaaaatttcattagagcacagttatttcaatttgtacgtggaaaatcatgtgctaactttatggt aatatacatgttattggaaaaagaaatcttagagcctttgcacttggtttcttttagtttaaactagctagtgcatgctg aatagcaaatttatccccctcttatagttggttgatattaaggtgggactttatcatttcatcaacaggtgttgggcagg atgttgtttgattcctttctgtttggatgggtgcaaggatgttatccattcctgtcccaactgtcactccaggcttgggt gttttcgtcgcatgtgaacctttccttcagtatgtcgtactcatactcatcgaaatgtgcctttatctgattgtcacggt ttccaaatactatccttgtcctgtttcatgccttcagttttctgggtgtggccaaaatagtaatcattgataatattaat tattgttagtgggataaaaaaggatgatgtttcctgtcattccagtttcaataacatgaactttctgacctgcttttgtg ccccattgtgttcaggtttggagcataacaagatttacactctgtaatagtttgcacttcattatttgtgtcaagtgacc tattttcacgagaggcttggggttaaagt |
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Protein
| Protein ID | aug_v2a.10262.t1 |
|---|---|
| Definition | - |
>aug_v2a.10262.t1 MADPGKPPPYNYGAIPTDSGNQPPPPYPATVGFQGAGKPENYMPPPTHPYPQPQPYQCPPQPATTTTIIAQPAQTVFLNM VFGESPVSMVCPHCHTHIITCTTYQDGTLTWLASGALCLLGCWAGCCLIPFCLDGCKDVIHSCPNCHSRLGCFRRM* |
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