Gene
Gene Model ID | aug_v2a.10970 |
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Locus | scaf4230 : 2753 ... 12714 : + |
To GenomeBrowser | scaf4230:2753..12714 |
Genes list of scaffold | scaf4230 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 2-19 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 2-13. This gene model has RVP and RVT_1 domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.10970.t1 |
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Definition | - |
>aug_v2a.10970.t1 gagtaaggcacgcgcgctggcggcgcagggtcctgcggaaagtggagagggcttgccagattctccttcagcagtcgcgt ggccaagcctgcccgccctgccagccccaccgcaacagcccaataattctagatttcagggtgtgcttcgttccttcaga aaagtaattcacccgttgcgacgcggatctcacgaaagcgcttctcgtcgagaacatcctagtttaaagtcagttgagag tttgccacccccaccgttagagcaattagccgaaacaaacgtccgagcaattccgcgtcagcccaatttttcacagataa atgatttgccttctgcgcagtcaccgcgcccacctttgcctgtgagacacatccctcctggtcttttggatccgttagag gactcagagcttagtgagcttccaagttcatctgacagcgaggaaagttcgttaccattgcttcgagttagtttaacatc ggaaccggtttcgaataactcagcacgccgaaatatcttgggacccgatagagtttttaaccagtcttctgaaagcgagt tcgttatcacagatcacatacccatgtctcgccaagaacgagcggatgattcggtcgcacagatctgcgacgccattcgt agtatggcagttcaagaaaacccgcggtcaaagttagtagttagttttccagtatttcatggcgacgagagtgaggatgt gtttgatttcttggataatttcaaaagagcagccaccctaaatggttggtcaaacaaggatttggcagtaggtttgcctt tgtatcttaaaggccatgctagcacttggtttaaatcactgggaaacgtagatggcaaaacttttgaccaattgaaagcc ctgatgacagagcattttgcaagctgagcaagggcttggcgcataagacaaaccttaggtcaacgccgccaattggaaaa ggaacccgtttccgaatattcctatagtgttagtatgcattgtgctaggttaaatttgccaacatctgagtggactcatt acttcgttcagggtctaaaacccgagattcgcgaatatgttattttacaacaacccgaaaattatgaggttgcagaaaat tacgcaaaactcaaagagtctgttttggcaagttctgataagcctcaagcattcgacccaaaacaaatgtcatctcaaat tgtggctgagctgagcagggtaatttccccaggaaatgagactattggcgcaatcggtagtcagcagacaaattttcatg acgcacattttaaaagaatggcgtgagatgaatttcacggccttacacaaaatagtagaccctcagggaatgagtttcga cgacgtaggaattttgggggccagacaagttttcgtccacgtgcaactaatcgtgtctgttacaattgtggccgaaaagg acatttacattattattgcaatgagaaacctgacccaagggttccacgacaaaacaattcccgtcgaggcagtaattttt atgggcaacaaaatcgatttagtggcaacagttttggtgataatcagggaaactaggtgtcgcccctgttgcgttggcaa atagagctgtgatgggggcgaattcaaatgagaaaatttgtagtcagatttcaccagcggatgcgagtttagtcgataaa aaagcctttgtcccgacttgttctgctgaccgaactgaagctagttgtagttttgaacctggtgagaagcaatcaccacc gtctgatgatttatcaaaacaaattgcctgcctttcgaggagcattttagctgtgttcatcctcttactgagtattatta tcagtttgctgaaattggttcaatttattttgggagaacttgtccaaacagttcaaaaaccgcgactgccaaaacaaccc tcaagctgtgacgttgaagagtcattacaggtgtccgactcttgcggaaacgataaagtggcacgtgtgaacgttcagtc agttgaaatagatcctcaagattttcaagtggtccaagagaaacaaattaaggtagagacagcaacaacttatcatgtgt tttccggtgaagacacaacagtcttgaactcgagtcctttagattctaatgaggaattaattgttctgtcacccgagatt gtcaaatcgactgaagtctagtgattgtgcttatcagaagcgaaacactgatacgtctattaggtcaatgaacagcgtga cttttcagttgaagtctagtgattttactgtttcagtaggtattgcaaatttcagatttcaagctttgttagacacaggc gctgccgttactgcagtgagtgcgcgcatttcaagagaatatttaattgatattcaccctaatctgaatccgcccgctcg cggtgctgtcacaacagtagatggccgcgaactagtcacgttgggaacgctagttttgacttttgaaattggtgctgatt cttttcctgagaaggctcatgtgatagaaggactggcttttgatgtgattattggaagggattttctcaaagagttttgc tccggaatcgatttcatgaaaaacgaagttgaatttgtacacgctgacgatccgcttccctttgattttagtgaccttga tgatgaccccgatgtagatgatttagaatttgttagttccgtgcatgcccactcttctttcacaatatcgctgcgatctg aaaagattgtacttggcaaattgaaaactaagccggcaaatggacagaatggagacgcttgtggcatagttataccaagg tctaacctgcctcatcgttattcaattttcggtgcagcagagattgttaaggtttcagagaatggtacgattccgatcag attggtcaatccgtctgcccaaccagttaaggtattccgcgagactaggctaggtgatttttcaagcgtcggagatgaag ttgagacacttgagttgaatgaatttcccccggaagtcttgtctgcgatgtctgagggtcaaatgaaaaacgaattgcct catcaccattattcagatttacctgatttgtcagacagcattttgaacgatgatgatagaattaagttccgtgagttatt tccgtgctaccgtgatgtttttgcttttactggtgaccaacttggtaaaacttctctcgtccaacacgtgatcgacacag gtgatgctatgcctattaagcaaaggccatatcaacccagtcctcgttgtaaacaagaaattgatcgtcaggtggatgac atgctccaaaaaggaataattagggaatccgtttctctttggagttcaccggtagttctcgtcaagaaaaagaatggtag tttttgtttttgtgtcgatttgaggaaagtaaatgcagttacaaggaaagacagttttcctatgcctttagtgtccgata ctcttgatgctttgaacggaactaagtatttttctacgcttgacttaaaatcaggttattggcaaattgtaatgcaccca gagtctcgagaaaaaacagctttcgtgacacacaacggtctttacgaatttaatgtcatgccgtttggtcttactaattc tggcgctagttttcaacgtctcatgggccatatacttggagggctagaatgcaggtttgctttgatttacatcgatgata ttgtcatcttttccaaatcaatcgaagagcatttgacccacttagaggaagtttttagaagattgcgtgacgcaaatgta aaattgaacccggagaagtgcagctttgtcaaacaacgaattgtgtatctaggtcatgttgagactccacggggtatttt ccctgaccctagtaaagtagaagccgtgaggaattttccgacaccagcgagtcttaaagaattgaagagttttctgggtt tagctaattattaccggtgtttcatcaaaggtttctcagaaattgcaagtccacttaatgcattatnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnncaccaacagggagcaaatcgccgatagacagttggactgctgtattagtccctttt cctttgacaaattccttttcctgttttctttcaaggttacccgtctcaaattatggattcaaacggtagaaccctgccat tgttagttggtttgttgattatttccgttattgtttctttgaacttcgaattggtgttgtcattacaatccaacgcttac ttgaagcgaaagggttacgttctatccagcgtctctgatagtcagtcacaatccaaagcctttaaccttttacgaaaata caaagctcctgaacgtacatatagttctcaatttcactgatttcggcgaaaggttatcgatgtcaaatcattcgtgttca ttgcacgacgggcgttttttcaatgacatacttaactcagttcgtgcttttcaaaagattttgcgcaggcttttatcaca accaggtttctctaatctcgtggaatgcgatacatatctgccgagatactaccagtttatgacgggtcaacacacacgca tgtcttgtccccgtgcttatcgcagctcgatttcagaatgcaagaaatgggctttaaacgcttgccgctcaatttcgagc gatgaacagaaatggttgaaaaataatcctcgacccaagagatccaattggatgtgtcacgcaggattatttggcatatt tcgcgcaatttacaaatctacaggtcataggtgccagtcgaaccatgtttctcacttaaaggaggcattacgcacaatga gtcgagcaatggcaatctctcagtctatgattcgttcggttaacggcaaggtcgtttacttgtttaaaattgctgaccac ttgaatagcaaggtaaatgttttatcacgcaacctgcacgtggtcgacgaagtgttatctgattggcagaagcaactggg tgacttttctatcaaaatcaaatgtaaacaaggcttgacgatggaatttttctcaaaatatgcagcagagattaaccgcg cgtttgcggcttttcttacactgttcgaaatccaggacactttgaaccaaatttttcgtctgaatagtaagacattgata ggttattcagatattcccgagtttgtttctgcacagctttcgtctaggttaatagccgatgacacgctccgctcaacagt gtcagccttaaagcgaggtctgtctgtcttagcgagccctacggttgacgtcgaacaaggcggtcgcgaattaaatgtca atgttttggttatagctccggagattttgagctcagaccatttctgtgttgcagaacacttaaccccactcaaatttaac ttgtccggtacttgttacactggcccggtgcgacagacaaacttggctctgattacatgtcctgattctaaaagtatagt tccgttagaagcgttagttagatgttttagtagtgaagtaggattcctttgtcccaaaaacgtattgaaatctctaatga gtttgcaatggctgggtttcgcctggaatcccgaactgaagatgtcattctcaaggaaccatataccagcttccagttgt gaacatttgcagcctttcgttcatcttggcggacgatattatctctcaacaacttcaggaactatttctactagcaaaag gcgcatggatatttctacattagcggtttacaacttcccatgtaatgttagcattgacaattatgaaatggcgctgtcaa cttgcccagagagactcttagtctcgctacctatgtgtactaccaactcagtgtcatatgtcaagtggaaacccgattcg agtgaccagactactttgcagctgcaccaccaattctacctcgtcatcagtccgagtcactacggagttacatgagaagc atgcgcatgcttatctggtcattgcagtgctgctatccggtcagtcaacacgcctgttactgcacggaacaaaaattttg gtctttacgacaataacttcatcctagctaaccttggcagttcgcctgctacgcatcattttcagggatcgccatctgtg agtactttttcgtttggaatttgttttttgtgcctaaccctctttcccgccggaatagacaccgcacaatggcgaacgaa cggatcgaaactactgaatctggcactactgtgccttcttcgcaaagtccaccggacttaaatccgagcccaccgggcca agatcagaatattgagtccgccctgaggcaattaaacaccaacatgggcacgatgactcacctcttaaccaaagtgtgtg cgcgcctccccacgacagaggcacgccgaggggatagctcctctagcccaagcccaccgggcacaagccacacacgccaa caacagcggtccgtttccatctccactgatgagtcttcggaacatgcacatgagccgcggcgaaaattgaggaaagagga cgattctctaagcctgcatgcaaccgacgatgatgttgctcaactatttgccgacccggcatcaaacccctcaaatgtca ccgacgaggctcatgaagcgggcgaggacgagtttcttaaagaaatcgtagcctccttacaagaagaggatgcaaaaggg ccaaaagttcaacaacagctggccgatattgccaacaaaaggtggggcaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnctggcttgggctatagcgccatcaatatggcacggtcggcattgtcgtcggcactaacaatccc aggcaacgtcacctttggaaatcacccgctcgtagctcgattcctcaaaggggtttttgagttgaggccatccctgccaa aatacaaccacatttgggatgtcagcgttgtcctaggacaccttaaaacgttacagcctatatgtaatttagaccttaaa gccctaacgctcaagttgacgatgctactttgtcttcttactggccagagatgtcaaaccttatccaaattggacacaac actgatgcagaaattacccggaaagtaccgtatttattcacttataagacgcactcggttataagacgcaccctaaactt tcgaagacgattgtgacaagtaagtaaaatgaaaatttcacc |
Protein
Protein ID | aug_v2a.10970.t1 |
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Definition | - |
>aug_v2a.10970.t1 SKARALAAQGPAESGEGLPDSPSAVAWPSLPALPAPPQQPNNSRFQGVLRSFRKVIHPLRRGSHESASRREHPSLKSVES LPPPPLEQLAETNVRAIPRQPNFSQINDLPSAQSPRPPLPVRHIPPGLLDPLEDSELSELPSSSDSEESSLPLLRVSLTS EPVSNNSARRNILGPDRVFNQSSESEFVITDHIPMSRQERADDSVAQICDAIRSMAVQENPRSKLVVSFPVFHGDESEDV FDFLDNFKRAATLNGWSNKDLAVVGIANFRFQALLDTGAAVTAVSARISREYLIDIHPNLNPPARGAVTTVDGRELVTLG TLVLTFEIGADSFPEKAHVIEGLAFDVIIGRDFLKEFCSGIDFMKNEVEFVHADDPLPFDFSDLDDDPDVDDLEFVSSVH AHSSFTISLRSEKIVLGKLKTKPANGQNGDACGIVIPRSNLPHRYSIFGAAEIVKVSENGTIPIRLVNPSAQPVKVFRET RLGDFSSVGDEVETLELNEFPPEVLSAMSEGQMKNELPHHHYSDLPDLSDSILNDDDRIKFRELFPCYRDVFAFTGDQLG KTSLVQHVIDTGDAMPIKQRPYQPSPRCKQEIDRQVDDMLQKGIIRESVSLWSSPVVLVKKKNGSFCFCVDLRKVNAVTR KDSFPMPLVSDTLDALNGTKYFSTLDLKSGYWQIVMHPESREKTAFVTHNGLYEFNVMPFGLTNSGASFQRLMGHILGGL ECRHRTMANERIETTESGTTVPSSQSPPDLNPSPPGQDQNIESALRQLNTNMGTMTHLLTKVCARLPTTEARRGDSSSSP SPPGTSHTRQQQRSVSISTDESSEHAHEPRRKLRKEDDSLSLHATDDDVAQLFADPASNPSNVTDEAHEAGEDEFLKEIV ASLQEEDAKGPKVQQQLADIANKRDVKPYPNWTQH* |