Gene
Gene Model ID | aug_v2a.11086 |
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Locus | scaf4282 : 321 ... 7385 : - |
To GenomeBrowser | scaf4282:321..7385 |
Genes list of scaffold | scaf4282 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Trp6 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Mus musculus short transient receptor channel 1 (NP_035773). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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short transient receptor potential channel 4- partial | GO:0005262 GO:0016021 GO:0070588 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.11086.t1 | gi|678010895|ref|XP_009081041.1| | PREDICTED: short transient receptor potential channel 4-like, partial [Acanthisitta chloris] | 9.0e-34 |
aug_v2a.11086.t1 | gi|675623528|ref|XP_008939943.1| | PREDICTED: short transient receptor potential channel 4-like, partial [Merops nubicus] | 1.0e-33 |
aug_v2a.11086.t1 | gi|733875141|ref|XP_010727263.1| | PREDICTED: short transient receptor potential channel 4 [Meleagris gallopavo] | 1.0e-33 |
Transcript
Transcript ID | aug_v2a.11086.t1 |
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Definition | - |
>aug_v2a.11086.t1 gattaaagaagcatctcggttgtgttttcacctgcccctggctgtcgagtcgactgcttcaagatcgccgctttggcgaa atggcgactgcgacatcatcaaatggagcagtctcaaagctaatagcggcgcagttaaacatgaaaatgaaagattcagg gttcgtgcgtccactgtggttaagcgatccaccgatcgtgggccaggaatcgtttttcgaaggggtaccaatgattgaat tgaacggcgaagccactcagagaaccccaagtcgacactcagggtccctggttcacaatgccagtgagcaacaagaaatt gatggcttcatggtgaatcatgagagcaatcttgaggaatccttactaaaagcagttcaagtgggaaacctacaagtaat tcaagttcttattgatcattatctgcaactttttaacctggaagccatgtgcgagaactcaatagccgtcgctcctaaga ctcctgtgaatttccttcctctcgttgttgctgcaaatttagggaattatgacgttcttaaattgtttatctctaagggg tttaaactggaaaagcctcacgatgtgctatgcaagtgtgatccatgccaagaggattacttcagacaatcacaaaaacg gctggatgtgtacagagccatggctaatccgatgtggatttcgctcacaggaaatgatccaatcttaacagcgtttaaat tgagtcaagacttgaaacgctctgctaaacaagaagacgagtttgaaaaggattactttgcactatcacttcaatgtagt caatttgcgttgggtcttttggacgaatgcaagagttctagagagcaaagaattatattgaattttccaggcacagaagc caaagatgaagaatttgccacagaagccttaggacttctgaacaacgctctctcttacgggcaaaaagaggtaagcgtat gttaataaataatcaaattagttaaaagcattgacaaaacaggtacttgttcaccaggcgaaaaattattttcatatagt caaaaagctatttgtatttacaagatgttttctcggttagttttataaaatattttttgtggacctttgctgaaggtctg tgtcttcacttaacctctctcgatattcgcaacaatttgcagaaatgtgtcaaacaaaagtaaaacaaaaaatcgcgatg ttgtacaatgtacgggaagagataatgctgaaagggaggataaccttaaatcgatgtaatttgccaagctaaatttgcat aaaacctacattcgatttttcacatttaaatgaaaattcgccccaatttacgagataaatactagatcagagaagtacgg taacctgacctcaaagaaagaaattaatttcctatgattcacaaaacacaggaagtaataacagtcgcggaggaagaaga aaaaaattgcgactctttaattttaaactatgatccttgtgttaggtttatacaaaatcatttttttatctgtcaaagac ctttttaacaaatcttagagcaacattatgaggggtaatgttcaaaagattgtagccataaaacgaaatatttagatttc actctaaaatgaggaaaaagcaaccaggcgaaaaggccactgcgaaaataaacttataacactacttgcgttgggctgca agttgaaagcaagatgagttaatggtagataagtttattaaaatatttaaaggcttaatgttgaccgcaaaaatatagga agttcgactactacaccttagttcagtataagctgacggagtcgcgcacatagagttccaaatttgaaaaactgaaaaag tctagtggagagaaaggtcagaggggaaaattgtacacaggaatagaggttacgaggtttaacaacagcacctcgaaaaa gtttttatttttttgcgttgacattaaaatagtaactctctctctcatttttttccgtaacttaaaatttcgacccattt tcggcttttcacccattgttgacatacatgacattcaaagacatgagaaataaaannnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnaagacgctttcaatcgcgctcggcttaaatggaacagctgctgtttcacataatcttcgaacagtgacagtta ttcgccaggctacgaatttaaatgtggccattgaaaatataactttggctaccactttccttctacactaataaagctat atagatatctgactcgttcactcttatttgtatgtaaaccgcatgaacaattaacatgctgagaaatccttatcaactgt ttaacattcagccatatttatactacaatttaagtcagaatggctgagaaattgcccaagactgaagatatctagttttt ccacttaaagtattattaacgtttttcgcataaacgaaaaaatagaagatttcaacatttgctgtttatcaatagtctat acagttataaatcgtggatttaaaaatcaacatagcaagccatagcatgcaaccgtcttcttacttctaagattttgagt agcgccgcgggtccactgtttcgtggttttagcctactctgtgcatcactgcaataaatgcttccgaccaggtggcctga caaagtttcgatcaacatatgaaaagctgcgcgagaaaatgttcttacaaacagagctatttttaaaaagtccggctgaa atgttaaagtaaaagcacaccgaacggtgatttgaacaattctccattaaaagcctctctgcaacaacgatggaagttta caattgaattatgttgcaaagaaaggactaatatcaaaggctaatatatgactcacaaaatnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatc ttggacgcttacttagtttggttcatacgagctctaattgagcgcattagtgctcttgactccattaccaaccactatat tttgagtgtaggagacggactttacgctatgggtgtcatagctagcttctttcggttgatatatctttgccagataagcc gctacttgggcctcttgcagctcagcctaagtagaatggttcgcgttattttccaatttgcctttattagcattgtgatg ctaacatcgttttcggttggaatgaccatgctttactcatcgtcctttgaagcatatggaaaggagaggccaaagagaaa tacgactgacccaatacagagcttgcttagcaaaggatatcacaggtaagtttaacaagggtggtttaacacaatcattt ccattcaattgaaatctgagctcagatgttacaagaaagaaagacaactatatgattaccagcgaagtatcacagccaag gacaattcgataaagttgatttccgttcaattcatctcaaggcacttttgcattcgtaacctccttttaagagtagcttt agctaccgaccaactcccaaagtaaaaataaaatgagtttgtttaaaacgggaataagagaaagttcatatctattaatg gaaagtgactccagcaaatgcagcaataacagttggagaatcgatcgataaggttttcggaataaaaggtaggcgacgga ttcacgacgacggattcacgaatgactccacgaatgactccaaacgaattaggtcacagctttactttgtcaaagcagct tgaaaacgcctctaagtcttgtttaagtatttgaatctggggggactgaaacaaaaatcttcaatactttgattttcagt ctgatcgagaccatggtgacgctgatgtgggcgagtttggacatgataacattggacagtcttgctgtgtttaaagacca aagcttgattcagatatggacggcaattctgttcacactgtatcatgcagcctcactcatcgtgctcctcaacatgttga ttgctatgatgagtaactcataccagcgtgttgaggtaaaaacttgagcaagcacatttttacaaacatccggttttctg acacaacagggggttgagaggttcatgatcttacctggagatccttgccttgcatgttaagtgatatgagctattttgac ccatacttcaacccacttactaatccttgtcctccatgaaaagttacaatcggcaccacccaaatacctaaacggctgct tccatccatgaagaaagctcccacagtctttttacgatcgtaacgatcaaaacctttgaaagtactatctatcgttaact gcattgttatctgttaaaaatacacttatcgattatttccctggtaggacaacattgaaacagaatacaagtttgctcgc gctcaactgtgggccgactacatcggagacggagttgctaccttaccaccgcccatgaatctcattccatccccaaagaa tatagtcaaatggacgtgcatattcaccaacaagtgttttggagtccccaagaagcttccttgctgtgtaaatgtgagta gtacacatgaacgaaataacacgctgaccatcgaattggtcaccaaccaacgatcaatggatcgatgaacgtgattgctg ccaatcaggcaatttcactgtcattcaaagaagaattgtgagtgatataggttttgccagtgactcattgcttcgttatc cataggctaaatgagcatcattccgccaatattgattttcgtttcacttcactcaaaacggattcaaattcaatttcagg gaaaaggtataggtggttttcacgtgacgtcatagccgccatgttggtggacgaaaacaaaacatctctcattagctcct tttgttcgtccaccagcaattgtacattgcagcattgtcatctgtgtctctaaagattggttgcaaaccacctattgaag atatctcgacgcttcatgctagataactcaatcgaataataacaaacaatttattacggcagcgtgtaaatggtctcaca tcaaaatgattcctgagcacaaagccgtctgctaatcacaagaaaaggccccgctcttaacctgaatccatgaaaacaac tgttatctaaattgaaaaagctgatatcgaatatttccgcctcgcgcgcctcattagctacccaaaaatagtgcagatga gatgttcaaagtattcttctaatttaccattattttacgcagaggaaattccgagtatatgaatcgcgaggcacagacgt tgaacagaaaaagcagttataccag |
Protein
Protein ID | aug_v2a.11086.t1 |
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Definition | - |
>aug_v2a.11086.t1 MATATSSNGAVSKLIAAQLNMKMKDSGFVRPLWLSDPPIVGQESFFEGVPMIELNGEATQRTPSRHSGSLVHNASEQQEI DGFMVNHESNLEESLLKAVQVGNLQVIQVLIDHYLQLFNLEAMCENSIAVAPKTPVNFLPLVVAANLGNYDVLKLFISKG FKLEKPHDVLCKCDPCQEDYFRQSQKRLDVYRAMANPMWISLTGNDPILTAFKLSQDLKRSAKQEDEFEKDYFALSLQCS QFALGLLDECKSSREQRIILNFPGTEAKDEEFATEALGLLNNALSYGQKEISRYLGLLQLSLSRMVRVIFQFAFISIVML TSFSVGMTMLYSSSFEAYGKERPKRNTTDPIQSLLSKGYHSLIETMVTLMWASLDMITLDSLAVFKDQSLIQIWTAILFT LYHAASLIVLLNMLIAMMSNSYQRVEDNIETEYKFARAQLWADYIGDGVATLPPPMNLIPSPKNIVKWTCIFTNKCFGVP KKLPCCVNRKFRVYESRGTDVEQKKQLYQ |