Gene
Gene Model ID | aug_v2a.11145 |
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Locus | scaf4299 : 1898 ... 8325 : + |
To GenomeBrowser | scaf4299:1898..8325 |
Genes list of scaffold | scaf4299 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-67 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC, and NACHT domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.11145.t1 | gi|260791287|ref|XP_002590671.1| | hypothetical protein BRAFLDRAFT_89472 [Branchiostoma floridae] | 1.0e-31 |
aug_v2a.11145.t1 | gi|260833905|ref|XP_002611952.1| | hypothetical protein BRAFLDRAFT_91836 [Branchiostoma floridae] | 2.0e-27 |
Transcript
Transcript ID | aug_v2a.11145.t1 |
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Definition | - |
>aug_v2a.11145.t1 ccatggcatttccattgttgaggcaacgagacgatctgcttatgatgaactggattggctcagctttccaccagggcatt tgacaatagatgtgattgttggtcatgggatgaaacttggtcgccaagcccaagtcatccgtgagtctcacaactgcaag tgggttcaagttgtacacactgacccagaggaactaggaattttcaaatgctataagaatccaatctcaacaggagaaga aaagcatcatattgaggtagagctatgccagatggctgattttgttgtgggagttggacccaagctggctgaagcctttc gcaagtacctcggcttttgtaaaaagcaccaagatgtttttgagttcactcctggtgtttttgatgagttttccagtgtt cagcaagttcctgacaaaagaaaacagtgcagtgttttggtgtttggtcgtggagatgctgaagatcttaagctgaaggg atttgacattgcagcagaagctgttgctctcttgtctggcacaatccttgttttcgtgggatcaccccatagaaaacagg agaagattgccaagcaattcattgattttggaattcctgcaaactgccttagggtgagaagttacacgggccgagaatct ctgaagaagttattttgtgaggtggatgttgtgctgatgccatcaaggacagaaggctttggcttgacaggcctggaagc tctgtcagctgggcttcctgtacttgtgagcaaaaactcaggttttggagaagctcttggcagcgtaccagatggctctt tatttgtcattgacaatgaagatcccagtgcatgggcagcggccattggacgcatctggaacaaagacagaaagtcacga cttgatgatgttaagactgtgcgacgtttctatgttgagaagtacggttggtctgaacagtgcaagggtcttattgaaaa aatagttgaacttgttgatggtatgaactacatttagattctaccaactagttgattaaaacgttaatttgaagaccttt gcagccaaaaacaaaatgcattattccggagtactgtttcatcatgtgaaaaaaaattttgtcaaagttggatcaatgtt gtgcaataattgtgcacatgtggtttattgctgtgtttgtaagactgtggatgggaaactttttataaggaatttgataa ggagtgaccaagctcaccagtatcataataaaattatcatgatgatggactgtcattacagagctcatagggttgatttg tgattggaactctcaaacattttcagctgttccttcacccatgttcatgaaaccatgatatcttaaccatctaaaatttc ttgcttgaataggaacttcctctgagcttgagatcacagcacaggcagtggaagaggggaagcagaaactgaatgaggac ctcgcaggtattattatttgtgatcatcaaaaagtaagagaggaaagttaaagttatttgtcctatactagagtagccat tgcatggaaatgtgtaaggtatgaagtcataaaaagacgtcaagctgaaaaaaaagttccaggctaaaatgggactctaa cccatgacctgtgagattgtgctgcacactgttcaaccgtcagtgctatatgtagaaggtgatcaaatgcaagctgagtt ttttgcccgacactgagtgagtgagcacaaatactttatataagtaccttgtaaatgttatgtgcatatgaatattaaat gtgcaatgatctcactaatatcaaacatttatatctgtcatatttcattaatcatattcgtcttcaaggaagtttcccat gaaaaaaaaatgacagttttttcccttgataaagacgtacagtaagagatttctggtttttgaaacttatgttacagatt ttcagtaacataacagcatatcctgtaatggttcacaggtgtactgtcatgttacgttctatgcaatatcctttctttcc aataggataacacattttgtttgacattatccgtagactattctccacgtgttccactcgaaacgaaaacaggaggaatt gaaaataatgacagtgagcaggcagcaggtacagtccatgaaagcaacaaagttagttgtcagggaaatgataatgatta tcacttcaaaggaatttttccacttttttattatagctttgatttcttagcagagcttgataaactcaatgaattttgaa aggcggttttaagagggttcatcgcgcggacatcgtgcgcgaatgtaattccctcaaaagttttgtcctttatgtgatga ataagtaaccccaagtgccctcgggcaattaaggattaagtttcgcaatttttggaaaactttgaaaatagcgtgaaatt aatccttaattgccctcggacccatgcgatgacatgttctaaacttggtttaacctcattaacccagttgaccactggtg ttctgattaatgaaagatttatggctaattgtacggataaattcgaaaatataaatactgccaatcacgcgtcgtatgct gggtggataaaatttgatcacttcattagaataaatggtttcatacattgatctctatttttattccttgtttgtttgtt tgttgcagctcgtgcttcgtgtccaagtcacgttatagaggggatacgacaagtttaccagaagtgtgaaggggtgattt tgccaattccttggtgtgacgaattcagcttccagatagagaacattttcaccagacttaagatagttgcaaaagaaaag acacgcggaaaatcaaccacaaaggaagtcacaaacatgacaggtatcttcacaccacacgagcgttgtgaacaaccgct gattgtgttgattgagggcgaacctggtatgggaaagaccacctattgccaaaaactggtatttgattgggcaagcaaac aatgtcgtgaatgggatgagacttttccaagaattgatgtgctcctgttcctcagatgtcatggaatcaaatctagtatc tgggacgctattgaagaccaaattctgccagatgacatcaagccggaggaaacagagatgtttttcgaattcttgaaaga aaatccctccaaggtgttgtttatgctggatggagtagatgaggcggactcacaaaaactggaaatgtacttgaaactta ttcaaaagaagcagcttcctggctgttacattgtgctcacgtctcgccatgaagcggggcgaaaagtgaggccgtacacc gacacgttgttagagattgtaggattcacaagagctgatgcaaagtgtttcataagaaagtattttgaacatgcgcaaca cttggcagaaaaactaatttcaaaagtttatcatgcttcttattttattactgataagggtgagaatgaggacgagttta tgtacaagttcgcacacgcggacgaggacgaggacgagtactcggatgagtacgattatgagcgctcggacgaggtcgag tgctcggacgaggacgagtgctcggacgaggacaaggacgagtacgagtactcggacgggaacaagtacgattacgtacg cttggtcgaggacgagtacgagtactcggacggggataaggacttaagggaactgttgaaaaaccctttaaacactcttc tgctctgtgttatcttcgaggatttaaagggaactctgccaaccaataggacgcagctttacgtggagattgttctcttt attttgagacggtatgaaagcaagaacggcttatcaaatagaggtaaagaccttttattagtttacaagagggaactgat gattctaggagaatttgcgttagactctctgcgtaaacaagagctgtatttcgatgaccacaaaggggacatcaaggaaa gtttgttgatgaagtttggctttctctcgaaccagtctggtggtagcaagagagctcctagcgaccgttacgggtttttt cataagagttttcaagagttctttgcgggttacttccttgctttttgtactattgataatgttagtaactcacactcagt actgaccgatgagagatacgtgaatgaactctctcatgttcttaaattcatgagtggaatcatagctcagcgatcggagg aagctgcagtatcatttgtaggaagtattgcctcaattgtaagtgagacaggcctcatatcccctaaggtcgatttttac ttaagtgttgcgaacatcttaattagagaatgcaaaacttgttcagaagacctttacacaaaagtagttcgtacctttgg tgaaaggcttcagttggttgacgtggtagtgaaccgttaccaatttccatggaacagtaaatttactgaaacgtttgttc aggccctcgcctttaactccaccgttttacgcctggacttgatgcagcggaagtttaccaatgtgctcactcggaccctc agagtaaacacctctctttcttctttggatttgactaacaattccattggttatgaggcagcaaattcacttgctcaggc cctcagagttaacacctctctttcttctttgaatttgtcttggaattccatcggtaatgagggagcaacnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacctctctttcctctttgaatttgtt ggacagtattatttgtgatgaaggagcagattcacttgctcagaccctcagagtaaacacgtctcttttttctttggatt tggtttagaatcattccattggtggtgagggaacaaaatcattgctgaggccctcagagtaaatacctctctttcttttt ttgatttgtttagcagttccattggtgatgagggagcaagttcacttgctcaggccctaaaagtaaatacctctgtttct tttttgcattcgcattattattccagtgtttattcatgattttgaggtctttgagaggaaacacctgtctttcgtctttg gattctcggaaggttctaaaacaatgtgtgacttaaggtaatatctcaaaaatgggtgccaatgtttcatcgagcacgag gaaacaatttgcaagcatttgcgtcttctttcttcctggtttggaagcatagactgattaggagtggattaatcgtgcag gtttttcagaaattcgtgagaaacgcgcgaactaatatattttcaaagatgcgtgataggataacagtttgctttttacc gctgtatcattgtagatgcatgtgacctaaatgcgggcaggtgattgagttctcagctcacggagtagttattatgaatg tgtgactttacacacgtttctattaacatttttacatcaaacaaaaattataaaacgaaagaaaagaaccgatcaccttt agaattcaaggccttgggtgttggcgtttctcatattgttgaaatgatatatttgcttaaagcttaagaaaaaggttcat gttgaatttgaaactttaaagcgaggttctatattaagattagagatgatcacagaatttcaactatcctattgttcttt acccagttattgagaagacgagaagcgctaaatcgctataaacaacaaccgagctttgaaaatttacccatcgaaaatta tgaaaaagtataaaatttaagggttgag |
Protein
Protein ID | aug_v2a.11145.t1 |
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Definition | - |
>aug_v2a.11145.t1 HGISIVEATRRSAYDELDWLSFPPGHLTIDVIVGHGMKLGRQAQVIRESHNCKWVQVVHTDPEELGIFKCYKNPISTGEE KHHIEVELCQMADFVVGVGPKLAEAFRKYLGFCKKHQDVFEFTPGVFDEFSSVQQVPDKRKQCSVLVFGRGDAEDLKLKG FDIAAEAVALLSGTILVFVGSPHRKQEKIAKQFIDFGIPANCLRVRSYTGRESLKKLFCEVDVVLMPSRTEGFGLTGLEA LSAGLPVLVSKNSGFGEALGSVPDGSLFVIDNEDPSAWAAAIGRIWNKDRKSRLDDVKTVRRFYVEKYGWSEQCKGLIEK IVELVDGTSSELEITAQAVEEGKQKLNEDLADYSPRVPLETKTGGIENNDSEQAAARASCPSHVIEGIRQVYQKCEGVIL PIPWCDEFSFQIENIFTRLKIVAKEKTRGKSTTKEVTNMTGIFTPHERCEQPLIVLIEGEPGMGKTTYCQKLVFDWASKQ CREWDETFPRIDVLLFLRCHGIKSSIWDAIEDQILPDDIKPEETEMFFEFLKENPSKVLFMLDGVDEADSQKLEMYLKLI QKKQLPGCYIVLTSRHEAGRKVRPYTDTLLEIVGFTRADAKCFIRKYFEHAQHLAEKLISKVYHASYFITDKGENEDEFM YKFAHADEDEDEYSDEYDYERSDEVECSDEDECSDEDKDEYEYSDGNKYDYVRLVEDEYEYSDGDKDLRELLKNPLNTLL LCVIFEDLKGTLPTNRTQLYVEIVLFILRRYESKNGLSNRGKDLLLVYKRELMILGEFALDSLRKQELYFDDHKGDIKES LLMKFGFLSNQSGGSKRAPSDRYGFFHKSFQEFFAGYFLAFCTIDNVSNSHSVLTDERYVNELSHVLKFMSGIIAQRSEE AAVSFVGSIASIVSETGLISPKVDFYLSVANILIRECKTCSEDLYTKVVRTFGERLQLVDVVVNRYQFPWNSKFTETFVQ ALAFNSTVLRLDLMQRKFTNVLTRTLRVNTSLSSLDLTNNSIGYEAANSLAQALRVNTSLSSLNLSWNSIVIEKTRSAKS L* |