Gene
| Gene Model ID | aug_v2a.11217 |
|---|---|
| Locus | scaf4329 : 197 ... 665 : - |
| To GenomeBrowser | scaf4329:197..665 |
| Genes list of scaffold | scaf4329 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-nr1d1-2 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| estrogen receptor isoform x1 | GO:0000978 GO:0001046 GO:0001077 GO:0003682 GO:0005496 GO:0005654 GO:0005737 GO:0005886 GO:0006338 GO:0006367 GO:0007200 GO:0007204 GO:0007548 GO:0008013 GO:0008134 GO:0008270 GO:0010629 GO:0010863 GO:0019899 GO:0030235 GO:0030520 GO:0030879 GO:0034056 GO:0035327 GO:0038052 GO:0042802 GO:0043124 GO:0043401 GO:0043433 GO:0045429 GO:0045944 GO:0048386 GO:0048589 GO:0051000 GO:0051091 GO:0060442 GO:0071392 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.11217.t1 | gi|156395075|ref|XP_001636937.1| | predicted protein [Nematostella vectensis] | 8.0e-22 |
| aug_v2a.11217.t1 | gi|685538481|ref|XP_009204123.1| | PREDICTED: estrogen receptor isoform X3 [Papio anubis] | 8.0e-18 |
| aug_v2a.11217.t1 | gi|675654902|ref|XP_008993524.1| | PREDICTED: estrogen receptor isoform X2 [Callithrix jacchus] | 8.0e-18 |
| aug_v2a.11217.t1 | gi|694918897|ref|XP_009450518.1| | PREDICTED: estrogen receptor isoform X1 [Pan troglodytes] | 8.0e-18 |
| aug_v2a.11217.t1 | gi|686723711|ref|XP_009240651.1| | PREDICTED: estrogen receptor isoform X1 [Pongo abelii] | 8.0e-18 |
Transcript
| Transcript ID | aug_v2a.11217.t1 |
|---|---|
| Definition | - |
>aug_v2a.11217.t1 ttcattgtcgtctgtgaaagttagacatctctgtacagagggagaagttcgacaatttcatacaatttctcttcgaaaca caagccacccttaaaatgggaattaagttattttttctaaacgtatctcacttttcacaatttcacgctctaaagtgaaa gttgccaatacaaaagcagcaactaaagcactcgaactaatatgacttcataacgacgcaattacgttcaacccttagct agaaactaggaacgtttcaagatgtcagaagaggacgacgagagcgaaaaatggtgtgctgtttgcagtgatagttcatc cggctaccattacggagcgaatacttgtgaaggatgtaagagtttcttcaaaaggacagtgcagaaaaatttaggtggta aatacgaatgtgtaaagtccacagatgactgctccgttgacaaggagtcgcgggccaaatgccaggctt |
|
Protein
| Protein ID | aug_v2a.11217.t1 |
|---|---|
| Definition | - |
>aug_v2a.11217.t1 MSEEDDESEKWCAVCSDSSSGYHYGANTCEGCKSFFKRTVQKNLGGKYECVKSTDDCSVDKESRAKCQA |
|