Gene
Gene Model ID | aug_v2a.11249 |
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Locus | scaf4351 : 39916 ... 43480 : + |
To GenomeBrowser | scaf4351:39916..43480 |
Genes list of scaffold | scaf4351 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-17 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.11249.t1 | gi|350415942|ref|XP_003490798.1| | 0.0 |
Transcript
Transcript ID | aug_v2a.11249.t1 |
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Definition | - |
>aug_v2a.11249.t1 accggtcactgggtgactatccaaaatccatagagtgtcatgaaaaacatttgaaaagcgcaatggaaattggtgatcgg ggcagagaaggtagagggtatggaaatcttggtaatacttacgactcactaggtgactatcgaaaggccattgagtatca tgaaagacatttaaaaattgcaatagaaattggtgatcggggcggagaagcaatagcctatggaagtctcggtagtgctt accaggcactggatgactatcaaaatgccttgaagcatcatgaaaaagaattaaaaattgatattgaaattggggatcgg ggcggagaaggacgagcttttggaaatctaggtaatgcatacaagtcactgggtaactatcgaaaagccattgagtatca taaaaaacaattaaaaaatgcaatggaaattggttatccgtgcggagaaggcaaagcctgtggaagtctcggtgatgcgt accagtcactgggtgactatcgaaaggccattgagtatcatcaaaagcacttgaaaattgcaatagaaattggtgatcgt ggcggagaaggaggagcttatggaagtctcggtaagcgtaccagtcactgggtgactatcgaaaggccattgagtatcat gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaa aattgcaatagaaattggtgatcgtggcggagaaggaagagcttatggaagactcggtaatgcgtaccagtcactgggtg actatcgaaaggccattgagtatcatgaaaagcatttgaaaattgcaacagaaattggtgatcgtggcggagaaggagca gcctatggaagtcttggtaatgcttaccagtcactcggtgactttcgaaaggccattaactattataaaaaaatttgaaa attgcaatagagatttgtgatcggggcggagaaggaggagcctatgcaaatcttggtgatgcttgccagtcactgggtga ctatcgaaatggcattaagtattttgaaagaacatttgaaaattgcaatagaaattggtgatcgggccggagaaggaaat gcttatcataacattggagttcttttcttttatcttgaagaatttgaaaatgcggtggataattttgtttccgctgtgga tgtcttcaattctttgagatctctattgaagtttcaagataactggaaaataaactttcgtgaggtgcacgaagggacgt acactgctttgtgggtgtcgttgctaaaaattaaaaagatcgatgaagctttgtttgcggttgaaggaggacgagcgcag actttgtctgataatttcttgattcaatataaacttaatgcgcccttatcatctgccagaattgacaccaaagagacaat atctcgcctcctgacaaagatttcttcaccaactctttttctagcaattgaaaactttacgatcaacatctggtttctga gaaagggaaataaagttagatttcggaaagggaggctggagggtgacagaagagaggaagatcctttacttgccttactg caatcatctttagaaaaaatgggagatgaagagacaagatgtgaagatcgcacatttgatgaaattgaaaacgagggctc gtttggcatagaagtgcggggtgacggagttggaaaaccaccatcgtcgcctttagataatccctttcagccattttatg atgcagttattgatccaattcttgacatgcttgaatctcaagaggacgagttggtcattgttcctgatggtgcgctgtgc cttaccccatgggctgcagtcactgaatcgattaggattcgtattgttccctcacttacaagttatcaattgatcttaag tgcacccgaaggacatcacaagaagaagggggcgcttttggtcggaaatccctgcctaaaggagttgaagaaacccttag atgacttaccatgtgctcaagaagaagtagaaatgattgcgtcaattctcaaaacaacacctctcacagggatacacgca acaaaagctgaagtgatgaaacggatgtcgtcagttggcttaattcatattgctgcccacggtaacgagcgcactgggga aattgctttgtctccaaaccctggatggtcttcaaagttccctcaaagaaaggatttcattttaaaaatgtccgatgtgc aggctgccaatcttcgagctcgtcttgtggtgctaagttgctgtcacagtggacgaggcagagtcttaaagggtgagggt gtggtcggtatcgcgcgtgcttttttggcagctggtgctcgttctgtgttggtggccctatgggcaatagatgacgacgc taccatggtgtttattaaaagtttctaccaacacctgaaggaaggaaaaaccgccagtgctgctgttcaggaatcaatgc aattccttcgtgaatctcaacagttttgtaagatgaagaattgggctccattccaacttatcggagatgacgtcaagatt gaattcgaggcggatgatgacgacaaaaaatgagaatatttttccattcctttgtcaccataataaccggcgttatctgt ttctctgactattttacttttcggtaacgccacataacacaacag |
Protein
Protein ID | aug_v2a.11249.t1 |
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Definition | - |
>aug_v2a.11249.t1 MEIGDRGREGRGYGNLGNTYDSLGDYRKAIEYHERHLKIAIEIGDRGGEAIAYGSLGSAYQALDDYQNALKHHEKELKID IEIGDRGGEGRAFGNLGNAYKSLGNYRKAIEYHKKQLKNAMEIGYPCGEGKACGSLGDAYQSLGDYRKAIEYHQKHLKIA IEIGDRGGEGGAYGSLEIGDRGGEGRAYGRLGNAYQSLGDYRKAIEYHEKHLKIATEIGDRGGEGAAYGSLEFENAVDNF VSAVDVFNSLRSLLKFQDNWKINFREVHEGTYTALWVSLLKIKKIDEALFAVEGGRAQTLSDNFLIQYKLNAPLSSARID TKETISRLLTKISSPTLFLAIENFTINIWFLRKGNKVRFRKGRLEGDRREEDPLLALLQSSLEKMGDEETRCEDRTFDEI ENEGSFGIEVRGDGVGKPPSSPLDNPFQPFYDAVIDPILDMLESQEDELVIVPDGALCLTPWAAVTESIRIRIVPSLTSY QLILSAPEGHHKKKGALLVGNPCLKELKKPLDDLPCAQEEVEMIASILKTTPLTGIHATKAEVMKRMSSVGLIHIAAHGN ERTGEIALSPNPGWSSKFPQRKDFILKMSDVQAANLRARLVVLSCCHSGRGRVLKGEGVVGIARAFLAAGARSVLVALWA IDDDATMVFIKSFYQHLKEGKTASAAVQESMQFLRESQQFCKMKNWAPFQLIGDDVKIEFEADDDDKK* |