Gene
Gene Model ID | aug_v2a.11336 |
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Locus | scaf4392 : 48466 ... 52414 : + |
To GenomeBrowser | scaf4392:48466..52414 |
Genes list of scaffold | scaf4392 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 18-1 |
Description | This gene model has RVP, RVT_1 and rve domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.11336.t1 |
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Definition | - |
>aug_v2a.11336.t1 aacccgagcacgaacaagtgagtaccttattgtatgttatgggagactgtgcagatgacattctagccactcttcgcctc gatgaaactaaagctacgtatgatgaagttcgcacagcccttaatggctatttcgatgttcgccgcaatttaattgtgca acgagccctcttaaacaagcggcaccagttggcgagtcagtggacacattcatccaagatttatacaggcttgcggaaga ctgcgagtacggttcgctaaaagatggccttattcgagatcgaatcgtcgtaggcgttgttgacgactcgttgtcagatc gacttcaagccaaagcagatttaactctcgaaatggcagtgcaaatgagtcgtcaggcagaagcacggaagcaaaacaaa gatctcattcggggaagcgctatctctgagatggctaccaaccctgcacgcgtggatttagtggaacctcacaaaagaga ttcaaaatcagtcatgaaacccgaaaacggaacacggtcaaagcccgaacgtaaatgtatgtggtgtggtggacagcaac acaaacggcaatcgtgctctgcaaaggatgtaacttgtaacagctgtcacaaaagaggacattttcaagctgtttgtctc tccaagaagcaggtggcaaaacgtgcattcgtcaacgaagtagcagatcttgaagaagtcgaagtcctttcctcggtgaa atttactgcagtgaagcaaacttctggaccgccattgtaaaggtggacggtcatgagacacactttaagttggatacagg agcagcagtttccatcgtgagcgataaggagccctggctcaaagactaccagctaacgaaatcgcagcagattttaagag gtccgggaggtaccactcaatcggttgtcggcacctttcgagccactctgacatataaagagcgtcagatttgtgaaact gtctttgtgttagaagatcagctctattctctcctcagcaagaaagcttgtgtggatctgggtttaatcgcccgaattgg agaggtgaacactcagccaacgaatttcattggagaatttcctcagcttttcagtggtctgggggaactggaaaccaagt atcagatcaagctcaatccaaatgtaaagccagtttgcctctatactccaaggaaaatacctcacccattgttgtctaaa gtaaaaaacgagatagattctatgcttcgacaaggagtaatttctcctgttaccgtccccacggagtggtgctccggcat tgtcccggtcccaaaacctaatgggcgtgtacggatctgtgtagacctgactccactgaacaaagcggtgcagcacaaaa ctcatcccatgggttctgttgacgaaagcctggccatgctgggtgaaagcagaatattcacgaaattggacgccaatagc ggtttctggcaaattcctttggatgacgactcaaaattgttgaccacctttatcacccccttcggccgcttttgcttcaa ccgcttgccctttggaattagttccgcacctgaaatatttcagcgaaccatgtcagacatcttggaggaccttgatggag tcatatgccggatggacgatatccttatccatggaagaaaccatgcacaacatgatgcacgtgttcgagcagttttgctt tgtctgcaaagggccggactaacattgaacattcagaggtgtgagttctcgcaaggaagactcaagttcctaggacacat tgtcgatgcccagggcgtccatgctgacccagagaagacacgtgctattggccaatttccaacccccataactgtaacag aattacagagatttatgggcatggtgaaccaactgggaaagtttgttcctggcctagccgacatcaatgcacccttacgg aaactccttcgcaaagacagtgcttggtactgggatgaagctcagcaaagagcattccagcaagtcaaagagaagcttgc atcacctgaaatccttgcacattacaaccccaaccgtcaaacagtcattgccgtagatgcatcatcaacagggctgggag tagttcttcttcaaaaacaagataatggacagcgtcgtccaatctgctacatctccagatcgcttagtggggctgaaaga aactatgcagtcatcgagaaggaagcgctcgcctcaacctgggcatgcaaacggcttgaagagtacgtccttggactcag gtttactctggaaacagatcacaacccacttgttccactcctcactacaaccgacttgtccaagatgccccctcgaatac tgcggttccgccttcgaatgatgcggtataatccagaagtcttgcacgttcctggtaaatgtcaaatttcagctgatgca ctttcacgtgctccagttagctctccaaatatgtctgacatcaagttcattgacgaggttgaagcctttgctggctccac aatggaccaacttcctgccactgctcagcgccttcaagaaatcatagaagctcagagagatgatgaagtatgcatgcaag tcagagggtactgccaaaagggttggtcagcctacatgtcccatcaacctctactcaggccatattgggaaagcagagct cacttggcagtcgttgacgatcttctcctctacgatgaacgcatcgtaatcccacaagttttaagattggacatactaga ctgcatccatcgcggccaccttggcattagcaaatgccgtgcaagagctcgaatgtcagtttggtggcctgggctatcta tagccatcgaagacatggtcaaagcttgtttcacgtgtgcaaaggagctgccagaacccaaggagccccttatgccgtca tcttttcccagccgcccttgggagaggattagtatggacttgttcgagtatggaggacgaacatactttatcactgctga ctgctattccagatgggtcgaaatcaaacttctgacaacacaaactgcaaagagtgtgatcacaactgccaaggagctat tttcaacccatggtataccagatatagtgatttccgacaatggaccctgttttagcgcggtatccttccaagagtttgct gccaaatataggtttctccatacgacaatctctcccagataccctcgggccaatggagaggtagagagagctgtaaggac tgtaaaggggctgttaaagaagaatgacgacccttaccttgcactcctctcctagagacctacacccctgcaaactggtc tctcaccaagtgagctactcatgggaagaagactctgaactcagctccctgtccttgcaaagacattggcacccagagac ttgaagagagagcgagaggaagttgtgaagaaggaagaaatctacaagtccaaccaaaggcaaagttttaaccaacgacg tcaagcaaaggagctcccggacttgacaagtggggactctgtatggatcagagaccagggttgcctagggaaaatacaag agcacacccagcatcctcgctactttatcgttgaaacagagaagggcacactacgacgtaacagatccgcccttgtcaaa gctgagttgccgtccccttcaaaagtggacaagcaaacctatttcaccagtactgcaagcggccatgctgttcaagacac agaagaaatgactagtccatctaagctcccgtgtactaccaccgaagctccaatgaaacctgttcctagtcaattggctc cattacaaacacgttcaggctgagttgttaagccgcctgatcgattgaacctctagactaatatgtgtgactttaccagg gcagtttaggtgatagttgttagatttatgcccttcagagactgtgttatgcactatcaagtcccgttaatatttggcag tcagatttgaagaaatagtttacgtttgc |
Protein
Protein ID | aug_v2a.11336.t1 |
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Definition | - |
>aug_v2a.11336.t1 MGDCADDILATLRLDETKATEANFWTAIVKVDGHETHFKLDTGAAVSIVSDKEPWLKDYQLTKSQQILRGPGGTTQSVVG TFRATLTYKERQICETVFVLEDQLYSLLSKKACVDLGLIARIGEVNTQPTNFIGEFPQLFSGLGELETKYQIKLNPNVKP VCLYTPRKIPHPLLSKVKNEIDSMLRQGVISPVTVPTEWCSGIVPVPKPNGRVRICVDLTPLNKAVQHKTHPMGSVDESL AMLGESRIFTKLDANSGFWQIPLDDDSKLLTTFITPFGRFCFNRLPFGISSAPEIFQRTMSDILEDLDGVICRMDDILIH GRNHAQHDARVRAVLLCLQRAGLTLNIQRCEFSQGRLKFLGHIVDAQGVHADPEKTRAIGQFPTPITVTELQRFMGMVNQ LGKFVPGLADINAPLRKLLRKDSAWYWDEAQQRAFQQVKEKLASPEILAHYNPNRQTVIAVDASSTGLGVVLLQKQDNGQ RRPICYISRSLSGAERNYAVIEKEALASTWACKRLEEYVLGLRFTLETDHNPLVPLLTTTDLSKMPPRILRFRLRMMRYN PEVLHVPGKCQISADALSRAPVSSPNMSDIKFIDEVEAFAGSTMDQLPATAQRLQEIIEAQRDDEVCMQVRGYCQKGWSA YMSHQPLLRPYWESRAHLAVVDDLLLYDERIVIPQVLRLDILDCIHRGHLGISKCRARARMSVWWPGLSIAIEDMVKACF TCAKELPEPKEPLMPSSFPSRPWERISMDLFEYGGRTYFITADCYSRWVEIKLLTTQTAKSVITTAKELFSTHGIPDIVI SDNGPCFSAVSFQEFAAKYRFLHTTISPRYPRANGETLAPRDLKREREEVVKKEEIYKSNQRQSFNQRRQAKELPDLTSG DSVWIRDQGCLGKIQEHTQHPRYFIVETEKGTLRRNRSALVKAELPSPSKVDKQTYFTSTASGHAVQDTEEMTSPSKLPC TTTEAPMKPVPSQLAPLQTRSG* |