Gene
Gene Model ID | aug_v2a.11555 |
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Locus | scaf4513 : 20326 ... 23190 : + |
To GenomeBrowser | scaf4513:20326..23190 |
Genes list of scaffold | scaf4513 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 5-4 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 5-1. This gene model contains RVT_1 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.11555.t1 |
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Definition | - |
>aug_v2a.11555.t1 caggtagcaagtatgcgtttacctttcttgatgagaaacaacctatggttcaggtgaaggttggtggtgtattaacgttg ccatgattttcgactcgggagctagctgtaatgtgatagaccgcaagttgtgggaagagttaaagcagaacaaagtaaag tgtgtatctatgaagttcaataagaaactgtacccatatggaagtgctgaaccgttgaaaacagatggttgttttgttgc aacagtaactgtgcgaaatgccactatagaaccagagtttgccgttatcaaaggaaaacgccaagcgttactaggaagag agacagctacacaactggatgtcttgtgccttggagaggaagttagagttaatgttttgaaacaggaagatatctttgat aagtacaagtcatgtttcgagggactgggaaaattgaaggattttcagctggacattcccattgatcagaaggttaggtc agttgcccagcctatgcgtcgtgtgccgttcagtatgaacagaaacttaatgagcttgtagatcttgatgtaatagagag agcagagggtctgacaccctggatttcacctgtagttgttgtgcctaaaccaaatggcgccatccgtctttgtggtaaca tgagacaggctaatggtgctattgtacaggaacgacaccctattccgacagacaatgaagtccttcatgacctgaatggt agtactgtgtttagtaaacttgacatcaagtggaattgagtgagacttccagaccaattaccacgtttgcaactcataaa ggacttttcaggtacaaaagactgatgtttggagttagctgtgcacctgaaatgtgtcagagagtaattcagctagtctt agaagactctgatggtgtgagaaacatacatgatgacattattctgcatggtcaaacaacagaagatcatgacaaccagc tggaacaggctatggagagaatccagaacagaggcctaacgctgaacaaagagaagtgcaaatttcacatgtctgagctc gagttcatgggtcacttactttctgcacgagggataggaccataccaaacgaaagttgaagcagtcacagaagccagaca accagagccagcggcagaagtgcgtagcgtcttaggcctagtgaacttctatgcgaggttcatccctgatctcgcgacag tatcagaacctctcaggggactcaaaagaaaagatgtccatttctcctggggaaaagaacaagaagcagcgttcaatgag ctaaagaggttggccaaaacagaaaatttgggttactttgacagtgctgcaaaaaacccttatcataactgacgccagcc cagttggccttggtgctatcttagtacaagaacagaatggtgaaaagcgagtgatctgctatgccagcaggagcttgaca gatgtggagaaacgttattcacacaccaagacaaaggctcgtgggatcgcgtgggcatgtgaaaggctacacgtgtattt gtatggaacttattttaaactcttaacagatcacaacccctgcagtttatctacttgaagaagtcgcaacccagtgcgag ggtcaatcgttgggtgttgagactccaaccctatcgttttactgtcaaacacatacctgggaaagaaaacattgcagatt ccctctctcgtcttacaagaagcaaagcaagtgcagaccttagttctgcagcagaggagtatgtcagattcgttgcagaa aattcaactccacaagcaccgtctacctgagagatcgagcgtgcttcagatgcagacaaagaactgtcaaacgtaagaaa atgtgtgcaaacggaaatgtggcacaaacttgagaccagctatacctgctcgtcagaaatgaactttctgttataggaaa attagtactgcgaggaacacggatcatcatcccttctagtttacgcaatcaagtcctgcatcttgcacataagggtcatc cgggaatagtgtccatgaagcgcagacttcgtaccaaagtctggtggccaggatgtgacaaagacgcagaaacgttttgt aagacctgtaatccctgccagatggtcagcatgcctaagccaccagaacccctcaagaggactgagttgccctcaggtcc atggcaacacatttcagcagaccttatgacaccatctctgccatcaggagaccatcttcttgtagttgtcgactactaca gtcgctatatggaagtagaagtcttgaggcctacaactgctgacaaggtcattgcaagtctgaggaacatattccttacc catggattgcctgtcagtatcactactgacaatggaccgcagttcacaagtgaagaattctgtaaatttgttgaagaaga acgcattgaacacagacgagtgactctgctttgccctcaagctaacagaaaagtagaaagacagaaccactccctactga agaggataaagattgcacaaatagagaagagaaattggaaagaagaacttgattctttcctaataatgtacagaaccact ccacacagcacaactggagtaagccctgcagaactcctgtttcgcagaaagctgcgaacccgtataccacgaagaatatt gaagaattcccagtggaagaccaagaagtacaagatagagacaatgaagccaaggagaaaggaaagctgtatgctgatga gaaacgctgtgcccacgaaagtgatgtgaaagaaggtgacaccgtattgttaagacaagagtgaaaaaacaagttgacgc ccactttcaggccggaaccataccgcatactggacaagtcaggtaacagtgtagtggttgaatca |
Protein
Protein ID | aug_v2a.11555.t1 |
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Definition | - |
>aug_v2a.11555.t1 MIFDSGASCNVIDRKLWEELKQNKVKCVSMKFNKKLYPYGSAEPLKTDGCFVATVTVRNATIEPEFAVIKGKRQALLGRE TATQLDVLCLGEEVRVNVLKQEDIFDKYKSCFEGLGKLKDFQLDIPIDQKVRYKRLMFGVSCAPEMCQRVIQLVLEDSDG VRNIHDDIILHGQTTEDHDNQLEQAMERIQNRGLTLNKEKCKFHMSELEFMGHLLSARGIGPYQTKVEAVTEARQPEPAA EVRSVLGLVNFYARFIPDLATVSEPLRGLKRKDVHFSWGKEQEAAFNELKRNELSVIGKLVLRGTRIIIPSSLRNQVLHL AHKGHPGIVSMKRRLRTKVWWPGCDKDAETFCKTCNPCQMVSMPKPPEPLKRTELPSGPWQHISADLMTPSLPSGDHLLV VVDYYSRYMEVEVLRPTTADKVIASLRNIFLTHGLPVSITTDNGPQFTSEEFCKFVEEERIEHRRVTLLCPQANRKVERQ NHSLLKRIKIAQIEKRNWKEELDSFLIMYRTTPHSTTGVSPAELLFRRKLRTRIPRRILKNSQWKTKKYKIETMKPRRKE SCMLMRNAVPTKVM* |