Gene
Gene Model ID | aug_v2a.12206 |
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Locus | scaf4825 : 1640 ... 7695 : - |
To GenomeBrowser | scaf4825:1640..7695 |
Genes list of scaffold | scaf4825 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-DHC-f38 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. This gene model has MT and AAA9 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.12206.t1 | gi|524881342|ref|XP_005097323.1| | PREDICTED: dynein heavy chain 3, axonemal-like [Aplysia californica] | 0.0 |
aug_v2a.12206.t1 | gi|260804805|ref|XP_002597278.1| | hypothetical protein BRAFLDRAFT_118159 [Branchiostoma floridae] | 0.0 |
aug_v2a.12206.t1 | gi|512868189|ref|XP_002932028.2| | 0.0 |
Transcript
Transcript ID | aug_v2a.12206.t1 |
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Definition | - |
>aug_v2a.12206.t1 gacgaatgtgaggagcagttagctgttgctatgccagcgcttaatgcggcagtgtcagctttggacacgctgaaacaaca agacatctcattggttaaatcgatggccaatcccccatcaggagtgcgcttggtcatggaagctatttgtatacttaagg tgagtgacgcctgacgttaagcgtagtttatcctgactgaaaattgtcatgttgcatgcacagatgtgtctctttgaact gttatcgcagtttactctctatcataacgctgcttcatataatacgaaaattatttccaacaatattaactgttgtggac agctaaaacaaaactgtttttgcctataaattatccccagaagagcggctggacaaaaccatgcaatgaaggttttattt ttttttattgtgaattaagttgcatcaagaggcgttacgatcgatttcaaaatctcgcaacacattgttcaacaagagaa acagaaaaccttctcttctttcgttcatgattggctcacaagcagagtgatgactttgatttgtttttttacgacgctca acagaaagtcacttaaatgtgactggaactgtattcttcaaagcagacaaggcgatcacccatcagataaagagttcagg tagaaagattagatgaggtagctttcctagaatgtagattaacgtagtgcaaaattgtcagatacaaatttaaaccaaag tactgcagggtgtcctctttgttgagttataaagtatatctagagatgacaaagtcttcgttcgtcgcgtaaggtccttg ccaaaacaacgttactgatcagtttattgttagagaggataaagatgaccgtttctcattgttaagaagaaatgaaaagt taggaagcattcagttgtgtcaaaatcatttttgctcgcgattttcatcactgaaattatgttgctgtgctatggcgaac aacattgttaacaatgcttgatcgaaagaatagtttagatttcatccgccaaaatagattggatcatttcgtctatgttt attcaccctccttctccgtctctcctccgctttgctttgcagggggtaaaaccagaaaaaagacggtcgatggtaaacaa gttgaggattattgggcttcctctaagaaggtttgtatgttttcttcatattttcactgtcttgtctttctgtcttatcg aatactaaggaagtaccgaacgaaatgagtgaacaagttgttccccgtaacttgaaaaaatttctgcctaattttggtca cacttttgacggcagacagatatttttctttacgcttcttgcttgattaccttttcaggttcttggagacttgaaatttc tggagagtctgaagattttcgacaaagaaagcattcccgttccagtaatccgtaagatcagagagaaatacgtgaccaat ccagacttccatccttcgctaataaaaaacgtgtcatcagcgtgcgaaggactctgctcatgggtccgcgctattgaggt ctatgatagggttgccaaggtaacaacgccatgattaatttagtcatgttagctgatatgttgacgcttagttaaaactg gttgtacttgcaaataaaacatttttgaaacgacttttagcagtaaaaagtagactacgtggatgtagctgtcgttcacg caaggctcatgtgcattaacttgagatctggacgattgtatacaagttatataaattaaattcagaaacatgtattccag ccttgcttttggctctaattcaggccgttgcgcttatgaggtgaagcgtggttcatgcttcaccccttctttcagggagg ggtcttattggtccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgtttttttgatcaaaattccaaag aatacttgctttaaagtgagtttagtggatcaaattttctgaggattttaacgtggacttgaaaatggatcacagattgt tgtccgttctctcattcccctttgaaaaaaaaatcaagactaaaagttgaaaataaaagcatgtgcttccaggataaact agaaactgtttttcttttattaggaactggaaagaaacatcgctttgtgttcccagaagctcttgcgagctgagaaactc atcagtgggctgggaggagaacggtctcgttggacccaggtacctcgcggtagtccgagtggaaaacttgctcagctttt ccttttgtgtcagtttagcaagggatttaagatcataatcttgcttacaaagattacagagagtataaccggtcgaaagt ttgaaatgctgatggtgatatctggtattatggaggttaattcttataagcctcttcctaaagtcattcctttgttttgt ttgtgttgttttttttctcgctcacttgatcagtctcctatcttaacagaaacacgaaaaattgtgtataggcaacagat tttccttctcagtaggattcccttgaaatccaacgtgcctgtcacgacttcatgagcggatcgattcgcaacacagtttg gagttcaatccgagcttatttctcatatttagtttttcttataccccaaatgagtgttttttttaacgtggcaatgtgcc tctgtgaagaattgtcgagcttaagtgtcgttgtttctaggtcgcacaagaacttgcagaaacttacaataatatcgtcg gcgacgttttgctgtcaggaggaatcgtcgcgtatctcggacccttcaccgtggaatttcgacaggcaaggtttaatttt gattttcccacatgaaagtaagtgtttcgtaacttgtggtgcattccttctcggcttttctaaactaagtatcaacacgt gacaagtaaactaaaacgattgtgctcctatgttgcacgtgagacatgtggcgaggaggactggtgttcactaagtgcac ttgttgcagtgttgtaacaacagttgttgttgaaaatgtcatttggtgtcatttccattcaggaatgcatcaaagagtgg tggagcttatgcagagagaaaaacgtaccggtttcggataatttctcattgtctgccacactaggagaccctttatcgat ccgagcttggcagattgcaggtttacccgtggacaagtaagtaattgatctatcgccctactttttttcattttttcgct ggagatgacacagcccctggtcaggaggcaacaaggtttaataatgataataatataannnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnntagggtctatgcagttactctcagtaaaacttggacgttgcctgatgtggccggcgaa ggccagcataagctcgtagcctcccatcccttacatggcttggctgtttgatgcttcacattagttctaattgatgcgtt ttgacatcttgtttagtttgggactcctgtcttgttggagaacgttggggaagaagtagaccctctattggaacccatct tgcttaaacaaacgtttaaacaggtttgtaaaagaatttcagttgttcgtgagaagttttattttcttgatagatcgtga tgatgttgaggttacttgcatgctttacaactgagccgttggagccaggccttttaatatcctttccagtctttccatac tcacactgataaacgcccgctgtgttttaaaatcgtacgatcctttgtagggaggagtggagtatctacgaatgggcgat catgtggtagagttcagcagggtaagacgcttacctatatctgaggaataaattgtctgagctgaaaattccagcaatgt tgcaaacattgtacttgttttgttttgacaggatttcagattttatatcaccacaaaactaaggaatcctcattatcttc ctgaagtatctgttaaggtaaggtgaattctgttggctcatagacgactttcttaaatggcggcacatattattatccct tcgtatttatgttaatcaaaaaatctaggttctcatactcggggtgttactgtgttccacacagattgatttatatattc ctgcgtctttcatcaggtcactcttctaaacttcatgatcacgcccctggggctggaagatcaattgcttggaattgtag cagctaaagaaaaacctgaattggaagagaaaaagaacgagctgattatagagagtgcgaagaataagaagcaactaaaa gagattgaagacaagattctggaagttttgtctacaagcgaaggcaacattctggaggacgagagagccattgaggtatt cagctgaatatgggcatttcactattattttctctcgcaagctttgaattagttcgcagagcctgagaccagcaaactgg gagaggatctgggtgtgactgcgtcatggccgaaactatgaacttaaaaaagcgcgagaaatttccacagttgcaacgac atcttcccgtgatcagagtttcttattttcttggcatagcaaagtattaagctacttttaatttgtatcttgattcaggt gctttcatccagtaagaaactttccgaggagatttccttaaaacaagagattgcttcaaaaactgaggaagagattgaca ggacaagggatggttataaaccagtaagaaatatacctctcgctaactttgatcaatatttcggcgggtaaagtgtccag cgggtgaatttcttttgccagggccttaaggggtgctgcgatatttcaacctcgttctcccagatttgtctatctcgacg ctggaatgaggcaaaagatatttggccgttactgtctaatctctcccaaaaatggaaacatttactcttaaggaaattaa tgagtctacatttggaaatgaatctgtccaaattcttttagacatacaccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnactcttgtctctgttctttcaccttcaggttgccaagcactccagtattctgtttttcaccatctcagacttggcta acattgagcccatgtaccagtattctctgacttggtttatcaatctgtaccttcag |
Protein
Protein ID | aug_v2a.12206.t1 |
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Definition | - |
>aug_v2a.12206.t1 MPALNAAVSALDTLKQQDISLVKSMANPPSGVRLVMEAICILKVLGDLKFLESLKIFDKESIPVPVIRKIREKYVTNPDF HPSLIKNVSSACEGLCSWVRAIEVYDRVAKELERNIALCSQKLLRAEKLISGLGGERSRWTQVAQELAETYNNIVGDVLL SGGIVAYLGPFTVEFRQECIKEWWSLCREKNVPVSDNFSLSATLGDPLSIRAWQIAGLPVDKFYITTKLRNPHYLPEVSV KVTLLNFMITPLGLEDQLLGIVAAKEKPELEEKKNELIIESAKNKKQLKEIEDKILEVLSTSEGNILEDERAIEVLSSSK KLSEEISLKQEIASKTEEEIDRTRDGYKPVAKHSSILFFTISDLANIEPMYQYSLTWFINLYLQ |