Gene
Gene Model ID | aug_v2a.12270 |
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Locus | scaf4850 : 20936 ... 24253 : + |
To GenomeBrowser | scaf4850:20936..24253 |
Genes list of scaffold | scaf4850 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Tctex2-4 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas outer arm chain (AAB58383) and inner arm chain (DAA05278). We could not determine whether this protein is an outer arm chain or an inner arm chain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.12270.t1 | gi|156393569|ref|XP_001636400.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.12270.t1 | gi|676464553|ref|XP_009056958.1| | hypothetical protein LOTGIDRAFT_233161 [Lottia gigantea] | 5.0e-30 |
aug_v2a.12270.t1 | gi|524913519|ref|XP_005111590.1| | PREDICTED: tctex1 domain-containing protein 1-B-like isoform X1 [Aplysia californica] | 1.0e-29 |
aug_v2a.12270.t1 | gi|74096411|ref|NP_001027637.1| | dynein light chain [Ciona intestinalis] | 1.0e-28 |
Transcript
Transcript ID | aug_v2a.12270.t1 |
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Definition | - |
>aug_v2a.12270.t1 aagcttcgactcggacagtcagattcgaaaacatagaacaacctgctaaacaacaacgcagcactgtatttcttcgcagt taaacgacaggaaataacgactcctggcacatcttttcctacttctgtcgtttctaaggttagtttacttctttatcccg ttaaagaccttcaacacacccccttccacttttccacgttttcctgtccgcgtattttaacagacttgtcttccctcgtg ggtagaggatttataacatagtttttgaagcaccaggtatgccacgcgaatctggaggacatcgaattttggttctattg ggtttaaaaaggctggtgatcattttgccaccgaaacaagactctttctaactaagtgggcgtttcgtttgagaattgtt tggtgcttcgagatcttttcccacagcgaacaattatccaacagtacgatttcagcaatgatatcatactgtccgtcaat aagcaaaaataacggcctattaaatatgcatctaggacttcataagttttgcctcaatcaattcgatgaagtggtggtaa caacaataagtcatatatttgaggacttcaatttcattaaaatatgccattcattattcgtaccttctcgacgtagacag gagttaggtgctaaagaggtaacggtatgcgacaagatcataccatcgggactaagcctacgaatagagatgagtttgga atgtttaaatcagatcttggcgagtacatcaatgcttggaggttaattaaagacaagccaacagcaaaataacctttccc ctgaacagagacggtccttggaaaacacgatacccgtagctgcatgtctcaatccataaaggaactgcgttttaattgac gatagcgaatgctaagaaggctgctaagtgcaactaagctctgaaagttttcttgaaaggtcagccagacaaacaaattc atttgcacgcctgagatttttacacgtcttgagaaaacaactaaagacctttgactgccaaattttcgatagaagagcga ttacattcgcagtagttaatacaagcagctgccttgtcagtgttttcagcttttcgttgtgtccttaaaacctgatttat cttcagaggagtattattgaaagacagtcgaggctgaaaggtgatctaggattagagatttccgacttttatgtagtcaa aataatgttactgaacaagcaaatatttacataatatgttttacattatccaaacacaacttagtgttctctattctccg gcaaatgccacggaattgatttcgcgggtcacctttccaatattctgcgaagaaactttgcccaaaagagagttacacaa aaacacttattatggtgctcttttaaaggcaccacaatgagtttggaatgtttaaatacatgaaaacttaaaagtttgcg actcaatttggatggagaaaaaaggaaagcaccaaattcagtttgcactttttggcacgtgttttaacacgacatatttc gtttccaagcgacgcaattacttttgttcgtctgatgtctcgcacgaacacttttaaattaatgctctttcgaacctttt caagagatcttaactcgatacaagaacacacttcaactgtggcctcatcatctgcctttgctgaaactagagaacaatca cgtgacctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nngctgcaacaacattctccacacattactgtgacaaagctgcgagttagtaagagaggttagaacgtgcatgctttcgt ctacgaaagatgtcaaagttggaattttgcgtggaaaggaaacctgctaataatttagataaattttgatatattttctt taaatactgcaatcaaagaagccccatatctcaaccactgtgtagtgttttgtgtgggcttcatgagttaatttagaagc tggactgtagaaattcggtttaattcttttccgaaacgggctgtcatttttctattgctacggtgtttttttccttcact gaatcttaaatgcttaaaaggcctgaacatactgatttcataaccaacttgcaaagagtaccacttgaactattttatct gaccttatgagagttttgctgacagttttaactcatgctcctattctttagcttgtatgcctgcaaggtatcaggggaat ttccagtgtgatgacgacatcataaagtcacgtgagtgatatcatcagcaatcgattttgaaaaaaacaaaaagaaaaaa aagtttttcggagagatttttgataaacatttcccgtcatttttgtgcaaaaggaaagaactttgctccaagactgatgt taacttcaatttgaggatgaccgactctggaaacgatgaaaataacgctcaaaaaccggccacacttgtttcaaaacagc gccgttctagcttgtttgatgttggattttcagtccatcgtgatcgaggttccagcatcatttctgttccgagcgtagtt ccgagccaaattcatgctatgcaccacaaagatcgatatgaaaacacctacaagatgcagccagacaagcgatttcacct tcctgaagttaaagaaatcatggacgaaacgctatcgtcgtctttgaaagatgtcaaatatgatccgatcaaatgcaaga ctctgagcaaaacgttgtcccacaccatctgcgagagggtcaaattattaggatttacaaggttcaagattgtttgtgtt gtgaatatcggcgagataaagggacaagatgtccgagtagccagtcgttttctgtgggacgagaaaaacgacaattgggt ggactctgtgtttgtcagttcagaattgtttggcgttgcagttctttttgccgtttaccaagagtaactgaaggatttaa cattaccacgtacttttttccacttgcttccgagagctactttagttgagttataacgaggcttttgtgaagatttttga aggcgtgcgagagaaaaaaataaaaaaaaagctgtgaa |
Protein
Protein ID | aug_v2a.12270.t1 |
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Definition | - |
>aug_v2a.12270.t1 MPARKELCSKTDVNFNLRMTDSGNDENNAQKPATLVSKQRRSSLFDVGFSVHRDRGSSIISVPSVVPSQIHAMHHKDRYE NTYKMQPDKRFHLPEVKEIMDETLSSSLKDVKYDPIKCKTLSKTLSHTICERVKLLGFTRFKIVCVVNIGEIKGQDVRVA SRFLWDEKNDNWVDSVFVSSELFGVAVLFAVYQE* |