Gene
Gene Model ID | aug_v2a.12371 |
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Locus | scaf4899 : 14464 ... 18194 : + |
To GenomeBrowser | scaf4899:14464..18194 |
Genes list of scaffold | scaf4899 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-41 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1, DUF2977, Paf67, Foie-gras_1, TPR_4 and TPR_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.12371.t1 |
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Definition | - |
>aug_v2a.12371.t1 aaatggatggaaaagaaggagaaaatagacgctacacgagtaatgaaagaggtacctttcaaagagccattgagaatcat gaaaaaaggttgaaaattgcgaaagaaatcgatgatcgtgctggagaaggaggagcctctggaaatcttggtaatgctta ccagtcactaggtgactatcaaaaggccagtgagtatcatgaaaaccgtttgaaaattgcgaaagaaatcgatgatcgtg ctggagaaggaggagcctctggaaatcttggtaatgcttaccagtccctgggtgactatcaaaaagccaatgagtatcat gaacgagatttgaaaattgcaaaagaaatcggtgatcgggctggagaaggagcagcctatggaaatctcggtaatgctta caagtcagtgggtgactataaaaaagccattgagtatcatgaggaacatttgaaaattgccatagaaatcggtgatcgag ctggagaagtaggagcctatggaaatctcggtgtggtgtacgagtcactgggtgactatcaaaaagccattaagtattat gaaaaaaatttgaaaattgcagaagaaatcggttatcgagccggacaagaaggagcctacgcaggtctcggcggtgctta cctgttattgggtgactatcaaaaagccattaagtatcttgaaaaacttttaaaaattgcaaaagaaattggtaatgggg ccgcagaaatagtagcatatggacttctcggtaatacctaccagtcattgggtgactatcaaaaagccattgagcatctt gaaaaacttttgaaaactgcaaaagaaaacggagatcgggacggagaaggaggagcctatgaaaatcttggtagttgtta tcattcactgggtgactatcaaaaagccattgaatatcatgaaaaagcatttggaaattgcagaagaaattgttgatcgg actcgagaagcacaagcctatggaaatctcggttttgcttacgggtcactgggtgactatcaaaaagccattcagtatca tgaaaaacttttaaaatttggagaagaaatccattatcaggctaaaaagcaggaatctatggagctctcggctgtgccta cctatcattggctggctatcaaaaagccgttgagtacctggaaatagatttgaaaattgcaaaagaaatcggtgatcggg ccgctgaaggacgagcttatggaaatatcggtaatgcttaccagtcactgggtgactatcaaaaggccagtgagtatcat gaagaacgtttaaacattgcaaaagaaatcggtgatcgggccggagaacgacgagcctatgaaaatctcggtaattctta ccagtcactgggtgactatcaaaaagcctctgagtattatgaaaaagatttgaaaatggcaaaagaaatcggtgatcggg tccaagaaggagcagcctatggaaatctcggtaatacttacgattcactgggtgactatcaaaaagccattgagtatgat gaaaaatgtttgaaaattgcaaaagaaatcggggatagagccatagaaggacgagcttatagaaatctcggtaatgctta cgagtcactgcgtgactatcaaaaagccattgagtataatgagaaacatttgaaaattgcaaaagaaatcggtgatccgg ctggagaaggtcaagcctatggaaatctcggtaaagcttaccattcaatgcatgactatcaaaaagccactgattatcat gaaaaagatttgaaaatggcaagagaaatcggtgatcgggtcgaagaaggagcagcctatggaaatctcggtgatgctta caattcactgggtgactatcaaaaagccattgagtatgatgaaaaacgttttaaaattgctaaagaaatcggtgatcggg caggagaaggacgagcctgtggaaatctcggtaattcttatcattcactgggtgactatcaaaaagcaattgagtaccnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnntgatcgggccggagaaggccgagcctatggaaatctcggtatttcttatcattcactgggtgactatcagaaagca attgagtatcatgaacgagatttgaaaattgcaaaagaaatcgatgatcgggccgcagaaggaggagcctatggaaatct cggtattgcttaccatttattgggtgactatcaaaaagccattgagtatcatgaaaaacatttgaaattggaaaagaaac cggtgctcgggtgagagaaggaggagcttatggaaatctcggtgtcacttacggctcactgggtgactatcaaaaagcca ttgagaatcatgaaaaatttttgaaaatgacaaaagaaatcggtgatcgggccggagaaggagcagcctatggaaatctc ggcaatgcttataattcactgggtgaccatcaaaaagcaattgagtatcatgaaaaacttttgaaaattgcagaagaaat cggttatcgagccggagaaggaggagcctatggaggtctcggccgtgcttacctgtcattgggtgactatcaaaaagcca ttgagtatgatgaaaaacatttgaaaattgtaaaggaaattggtaatcgggacggagaaggaaaagcctatcacaacatt ggatgtgcatattttgttctcgaacaattcgaaaacgcggcacataattttagctgcgctatggaagcctttaatgccgt gagatcttgcttgaagtctaaagatgattggcaaataaactttcgtgagctgtacgagacgacgtacactggattatgga actcgttgctaagaatcgaaaagttggatgaggctttgttggcggctgaacaaggacgagcgcagactttaactgataat ttaatgattcaatataaactccctgcatccttgttagctgctacaattgatctcaaagatatagtatctcgcttcttcac agagctgtcttcaacaactctttttctggcagttgatggactaacgattaacatatggcttttaagaaggggaaagaatg gtatatttcggcaagggaggctggagggggatagaacagagaaaaatcctgtacgcgccttgctgcaatcttgtttacaa aaaataggaactgatgttagagtaagatgtgaagatcgcacatttcatgaactcacgcatgacttcctgtctagcacaga agtgtccaaagacgtgaaaaaatcatttcagtcttcaaacaatccttttaagccgttttatgatgcaattattggtccaa ttgctgaatttcttggacctcaagacgacgagttggtcattgttcctgatg |
Protein
Protein ID | aug_v2a.12371.t1 |
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Definition | - |
>aug_v2a.12371.t1 MDGKEGENRRYTSNERGTFQRAIENHEKRLKIAKEIDDRAGEGGASGNLGNAYQSLGDYQKASEYHENRLKIAKEIDDRA GEGGASGNLGNAYQSLGDYQKANEYHERDLKIAKEIGDRAGEGAAYGNLGNAYKSVGDYKKAIEYHEEHLKIAIEIGDRA GEVGAYGNLGVVYESLGDYQKAIKYYEKNLKIAEEIGYRAGQEGAYAGLGGAYLLLGDYQKAIKYLEKLLKIAKEIGNGA AEIVAYGLLGNTYQSLGDYQKAIEHLEKLLKTAKENGDRDGEGGAYENLGSCYHSLDLKIAKEIGDRAAEGRAYGNIGNA YQSLGDYQKASEYHEERLNIAKEIGDRAGERRAYENLGNSYQSLGDYQKASEYYEKDLKMAKEIGDRVQEGAAYGNLGNT YDSLGDYQKAIEYDEKCLKIAKEIGDRAIEGRAYRNLGNAYESLRDYQKAIEYNEKHLKIAKEIGDPAGEGQAYGNLGKA YHSMHDYQKATDYHEKDLKMAREIGDRVEEGAAYGNLGDAYNSLGDYQKAIEYDEKRFKIAKEIGDRAGEGRACGNLETG ARVREGGAYGNLGVTYGSLGDYQKAIENHEKFLKMTKEIGDRAGEGAAYGNLGNAYNSLGDHQKAIEYHEKLLKIAEEIG YRAGEGGAYGGLGRAYLSLGDYQKAIEYDEKHLKIVKEIGNRDGEGKAYHNIGCAYFVLEQFENAAHNFSCAMEAFNAVR SCLKSKDDWQINFRELYETTYTGLWNSLLRIEKLDEALLAAEQGRAQTLTDNLMIQYKLPASLLAATIDLKDIVSRFFTE LSSTTLFLAVDGLTINIWLLRRGKNGIFRQGRLEGDRTEKNPVRALLQSCLQKIGTDVRVRCEDRTFHELTHDFLSSTEV SKDVKKSFQSSNNPFKPFYDAIIGPIAEFLGPQDDELVIVPD |