Gene
Gene Model ID | aug_v2a.13419 |
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Locus | scaf5461 : 28196 ... 38190 : + |
To GenomeBrowser | scaf5461:28196..38190 |
Genes list of scaffold | scaf5461 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-DHC-f62-16 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. DHC_N1 and DHC_N1 domains were found by Pfam search. adi_EST_assem_4248 seems to contain a nearly full ORF of this locus. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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dynein beta ciliary-like | GO:0003777 GO:0005524 GO:0007018 GO:0008152 GO:0016887 GO:0030286 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.13419.t1 | gi|156403574|ref|XP_001639983.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.13419.t1 | gi|260817699|ref|XP_002603723.1| | hypothetical protein BRAFLDRAFT_93047 [Branchiostoma floridae] | 0.0 |
aug_v2a.13419.t1 | gi|260809085|ref|XP_002599337.1| | hypothetical protein BRAFLDRAFT_275161 [Branchiostoma floridae] | 0.0 |
aug_v2a.13419.t1 | gi|568973731|ref|XP_006533276.1| | PREDICTED: dynein heavy chain 9, axonemal isoform X3 [Mus musculus] | 0.0 |
aug_v2a.13419.t1 | gi|390349049|ref|XP_786200.3| | 0.0 |
Transcript
Transcript ID | aug_v2a.13419.t1 |
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Definition | - |
>aug_v2a.13419.t1 ctagtaaaacgaactaagaaaacactaaaggaggcgtcagtctgattcttaaatcacggaaaacgctgtaaatttgtaaa tacttgcgagaaaaaagcggccaaacatggagttaaacgacgttcgtttcgagtttatttcagagtacacattgaagtca atgaaactgaaagcagataaatgggcgaagttgcaaggaaacgacgagtacagacaaacaattctggaatttttggaaaa accagagaacaacattctcattatttaccaaaatacagcgggacaacttcaaccatcatttgatttccccgcgtcgatca aggccaaggccgtttacttttccaagaaggaaaaaggcatgaatgttgggaaagacaattttaaaacagctcttatttat ggagatttatcatattcaccactggagcagttgtcggcccttgttgatgaggtttgtttttcaaaataagcctttaattt accattaattttattatcttgatggttgttattagtaatatgcatgggcattgagctctgttattttgacatctaagtga atcggcgctcgcacaattccttctttagagatgaaatattttcctgtggaaaaaaactttcctacccgccaatttgcttg ttttcctagcatgaactttatttgcaagctagctagggttctcgcattactgaaacattactgcaaatgtcagtctcaat gcatgatcaaattttgctttgctagtcaataagtattaccgctatatgtctttttagagttgttttgtttttaggaaagg aaacggtttgtactactatctagttgttgttattctctatctttaattgaaattctttatccctggagatcgaagcaggc ttaagtgatctacactgacgtaggtagtaagctactgtagtgattgttgtaaatcaggtttggtacttgaaagatttcta tttgaattagtggcggtacaaaaggagttcacatacaactggaaaaagttcttgattctacttgactacaagccatatta tgtaacaaaatcattttcacgatggcgttattttaccacctagaccagaatgctttgtcaaaatgctttcttattcaaat ttgtcttctatcttaggagtaaaggaacaataattattggataaattggtcatacagtagaggccgctatcagcattctg gtcttggtagtaaaatgtctccaccatgcaaatggcctattatgcatacgtgcagtccaacttcaattatccggacctga ttatgcagatttcttgattatctggacttgcttcagtggtcccagtttttaatgaatgttaattagtcatattttgtgtc cacaggaactgttttcctccaaattatgtgatgagcgttcactgcaacctgaatttactttgcttcaaagcacaaatctg catgcattaataattcatgctcacacgcattataactaatacagtgtatttaactgagctatgactggctcagattacgc agtatctgaattaaatttcacttactcttctctaagttattcagttttgttcttgggtcattaatattaatattttcagc tatccagactctcaataatttggactattcatcccagtccccacaagtccgaataatcaaggttggactgtgtcatatag atactttttttgcatcaggtttcaggatcctaaggtcttaatgaaagtctctcatgtaatgttattgtgcaaaaaaaaaa ttctttcttcttccttttccctctagcattactgttggagatagcagctactctttagtgtgacaaaacnnnnnnnnnnn nnnnnnnnnnnnctagatcttagtgccattactgtcaaactctcataaccatgaacaatggccagctgtcgtttctcaag atgtactacgtcatgttcacaagcttaaaagtgatgtctttgttattgctggacaagttaaaggaaagacattgctgccc cttccagtgggatcggagcaggtctccaatgctgtggaagctgaagaaaagtaagcattcagaaatgaaaaacaatcagt tgtttgtgtgttgttgtttgtaaaagtcgtatgccactacgaggctgcaaaattaataatctttttccataagcctgtcg tatctcagacaagggacgaggtttgagctgacatgcagccagtttggttggacaaaaaaaaaggagagagaataattatt gtaataaaatcattttggaagtgttttgaccgtgtggtcttcattgnnnnnnnnnnnnnnnnnnnnnnnnnnngaagacc acaagacttcagtatgaatattggtaggaccagtatgtgtagttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttgtttgttt tcagcttcacgatgttaaggtcagaagaatggcagagcttttggaaaagacccacagcagttactttccagcattcaaga atatttttaaaggcgtggttgctggtaaggagctatgtacatttcaggctaaatcagtatttgtagtgacagattttatt gactgaaggtaacatttattggggttataattatattgatcaatattatttttcacagctttggaagaggcaagggatat aaatattcatctgaaacccttgcgccgcttgctggatgacatggagcagtttgatttttctgaactggacaagatcattc ctgctattcttcatactgttggactcatctgggccaattccaaatattactgcagagccccaagagtcattgtcctctta caggagctgtgtaacatgctgattgacatggtaaatgtttacaaggttgaagatcaggcagtggaattaactgcatttaa gagagcataaaagaaattattgatgttattcatatgaattggggaaaattgctacaacgtaaaatatcttctggtgaagc ctgaactactagtatgtgctgccaagaggcatacattttaccgtgatcactccacaaacattgtttgaagtttgattgat ggtgatcagcagcatggccttgaatcttgctttatttccattaataaggcacataatgcaaacaaaaaaataattggaaa ggaactgctgtaaaggctactggaaattaataatatctattcatgtagttttgcagatagtttcagtaactgatgctgtg accttgttgtgttgttgacaggcaaggttgttcttagatcctgctgagattttcaagtcagaagctgaagaagcccatga gaaaactcggaaagctattgaggtttgcacctgttttaaggagcagtttgaagagatcagaaaaaatatccagaaattct tcaaggagggccaagaagtcaaacaatgggaatttgcaaatgaactggtgttcactaggattgatcagtttgttcgaaga ctgaggattgtggaggttagtctttgtaaattcctgtgttgccattattgtcattgagaaacatgttgccaagtgaaaca nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgccccatgttgcaggcgcta tgaagtggtctcatgagctgagggacagaatttctaagccaatgcatgctcttaaactctctgtgaatcatgggtaggta ttgtgcatgaagtttttttttcccttggtcatcatttttttttaagttgcttgatggattcccacacctaaaaatggaaa aaatcaggttgtctttaagatattatgtaagtgcaacctttttcaaaccagaccctaaattgaattgtttacagtatcta cagtgtggtttctttactggaaaatgagatagagaaaacatactagaggttttaataaagttcaacgaaagacaaggtgc tttactcaagttaagctggtgtcaaattttgaagaaatttatctttatctgatcactttgatttgagaaaaatatagcta atttttgagcgaggtagcagaggccttttaatatcatgagaagtggctagtgactacactggctgcttgcacattttgat aactgcagaaaaggacatcacagtaaattcatttcatgagtcacatctgaatttgcattatataataattatggagtcaa tggtttagcttaggatttgacttggtcgtggagttcacttgtttaaaaatagtgaactcattgacattaagcttgcagtc taaatgtcattcctgtaacattcactccaccagtgacattgttatttgtgttctcattgccacttgcagtttatacgcag tggtagctacagaatggcccgtttgcttggtctcatcataatcttgaaagtgatttctcttatgaatctttttgttagca atttatttgtgactgtaaaatctaaaaatgtgtaattgactgatgaaatcatgattattgtttgatttccagcacacttg agacagctgaggccatgatcatcttcaataaatttgatgaaatgagcaaactgctgactacgtaagttataatcactgaa ggctcaagtaacagcactcctcactttttttatgtgaggggaagtgtcccatttcttcctagaaatacatgcgtgtctgg agtatccttacacgggctcattgagatagccttcccacccagacatcattccacttaaaatgggtctaatttaagtcaga aagttgtagtttctttggatttataatttttgtaggctctcaagggctcacaatccttatctctgttacaggtcaaaatt atttttaggttattctgtttttaaactagtttatttttttttaaccaggtctgtctacatcagtttggggtaggtaaaaa acacaggtctcaggccacaagtcacaggtcattgcttaccaatacagaaagtatcctaaacattcactaaagctaacctt aggcctaaacaaaagtttttaggcctaatgtcagcatctgtaaacagttaggataccgttagtttctgtaaaggtaaaac aatgacctgtgacttgtggcctgtgacctgtgtttttttacctgttccacaatgatataagttgaaacaagttgaccctg gttgaaacaagttgatccagtttgaaacaaataatatcgacctaggttgagacagattgacctggttttaaaaaaataaa ctagtttaaaaatagaataacctaaatataattttgacctgtaacatctccaacaccaagaacatccatctagattgaag atgtacttatatctggcgactccacttttatagtgttaaggtttggtacttccctatattcaccaaaatgtgtaggtgtc gggtgatacctctaattaactaaggattaatgatataataatagttgtaagtagattaacaagctttttaaccttctgca gatatgaggaaaaagtttatgctgattggacaacagatgttgggtccatctcacagagaaatctggacaaacccctcatc accagggatgacaacacgaaactcatcaaagtcaattttgatcctcaggtttgcttgttgagttaaatgaatttttattg aattttttttgagtactgaaagaacccccccccccttccaaaaaaaaaacacaacgaaacaaacaatttagcaaacaaac atggccatatgtttcagactagtaaatcattggattttgtcttagatttttttatcttattttggaaaagttgcgaaaaa ttctcattgtatcctattacttttgattcttaactgaaaaatacttattttattcaaaattattctataatagtacttca aagatctgtagtgaattgtcagttagttctggtgctcagaaaaaacagtgaattctaaggaaattaaactgtggaaaatg ttttttgactatttctaagagcatgaatatagtcaacaacaaaagtgagatgagtggtctttttcttggcgagggttttg gcttttgttactgttgaaaaaattggttgtgcagcctactcatcctgttaatgaccagttacaaccttaagaaacttgca agacatcggtttcttgcgtttcatccccttggaatgatattgctctctatacatcggagtaaggttgtgaattttttgcc atgcgttcatcataatttttttcgcgtttcagttgattgcagtgctccgtgaggttaaatatctagaaaatgcacaaaat gaaacccttgaaagcattccagagagcgctacaggcatttactcgcggaatgagaccttccacaaattcctctccaatct tgacttgactgttgcatggtacaacaaaataagagaaactttgctggacgtggagtttccattggtagaagggcaattac aagagatcgacaaccagctgcagcaagcagaaacaacgcttaattggaatagtgaaggtttgtgcttgtttataacagac attatagagcagttttcaaattactgtcgaatgtaattaggccattgcgatcgccacgctttgatgatctcggccagttt ttcaaccaattagaagaaaaacaaaaaccaaccgcaccttatacgactttttctcactctttgaggtaattgatagaaat tatgattggtgcctcgctctgtttgctcctgccgtgattggtcagagtaattgttttgctattggcttttcgactgtcac tatcacgtgatagcaagtgaaattttttgggcctcatttcatttgcgttttgacgaaattcttgtagtttccagggcctt taggcaggaaaattattatcatcagctagaatgtggaccggactgttttaattgcctacgctactagaggccttagtaat agtcatcgagtagcaaaattcgtgctgcttttttttcgttttattctcaaacaaatacttcttcaacttgcatttgctaa ctttattactgccttttctatctgagtacttgggtgataccaaaacaattagacccttcgcccgcaacggccacgggtca atagtataattctgcttcgcctcgaagccctttcgggctacgggtctaattattaattaattattccatatttcagtgaa tgtaccattttattaccttttaataccacnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccaggaagctccagtcactcg aaagtagttttcagggaggtcctgcatccgatcgaattggaataaactaggagtcaattttgaggagggaggaaaccgga gtgcccggaggaaaccctcgaagtcaggttgagtccgactgaaactcaatccacatacaacatttgtagtagaggtggaa ggtgtaattgatgtccactacgcctgcctgacttcctgactttctgacttcccatatataattacgttgaaaagaagaaa aaaactccggcttgccgtagcaacctccttttttgtttctcgtgagaagttataaattagtgctgaaattttgcgccaaa ttttttggagtcatttgatattattgacttttctgcagtcaatgactgggttagttggtgtttcagttaaggacatcatc tattatccactacctccacatgaaattggaatgtggaggtgttggttttttggtgagattgagaaagagagaggcgcctc gaggcaatcaacattgacggggctccacccgcgtgacattaggtgtcttgaaagtctctgtggagaaaagcattcgttta gctgctgtctttgcatcgagataataacagttgtagaatttaacaacaggaaaaccaagattggaactgcagaatgggcc aatgtttgaattaggacccgagctgctctaccacttcactgtagatttcaaaacaagtaatctttttgaaaaatagttta gcgttcttgactttgtttttctaataaggtgcttgggaatacattgacaagacaagagagatggtgcatgatctcgaaaa gcgagtgcaagctgccaagaataacgtggaaagtatgagccagctgatgacaaagtggtgtgaagcaccattgtatgaac gcaaagagggcaagaaagaaggactgctcaacattgaggtaaaagtcatgcgaagacattcttttgaaataattcttgcg acgtctgcgaaattttatgagtgttcttgaactactgtcggcgtgaagttagtgtagtnnnnnnnnnnnnnnnnn |
Protein
Protein ID | aug_v2a.13419.t1 |
---|---|
Definition | - |
>aug_v2a.13419.t1 MELNDVRFEFISEYTLKSMKLKADKWAKLQGNDEYRQTILEFLEKPENNILIIYQNTAGQLQPSFDFPASIKAKAVYFSK KEKGMNVGKDNFKTALIYGDLSYSPLEQLSALVDEILVPLLSNSHNHEQWPAVVSQDVLRHVHKLKSDVFVIAGQVKGKT LLPLPVGSEQVSNAVEAEEKRMAELLEKTHSSYFPAFKNIFKGVVAALEEARDINIHLKPLRRLLDDMEQFDFSELDKII PAILHTVGLIWANSKYYCRAPRVIVLLQELCNMLIDMARLFLDPAEIFKSEAEEAHEKTRKAIEVCTCFKEQFEEIRKNI QKFFKEGQEVKQWEFANELVFTRIDQFVRRLRIVEVSLCAMKWSHELRDRISKPMHALKLSVNHGTLETAEAMIIFNKFD EMSKLLTTYEEKVYADWTTDVGSISQRNLDKPLITRDDNTKLIKVNFDPQLIAVLREVKYLENAQNETLESIPESATGIY SRNETFHKFLSNLDLTVAWYNKIRETLLDVEFPLVEGQLQEIDNQLQQAETTLNWNSEGAWEYIDKTREMVHDLEKRVQA AKNNVESMSQLMTKWCEAPLYERKEGKKEGLLNIEVKVMRRHSFEIILATSAKFYECS* |