Gene
Gene Model ID | aug_v2a.14057 |
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Locus | scaf5826 : 6961 ... 9987 : - |
To GenomeBrowser | scaf5826:6961..9987 |
Genes list of scaffold | scaf5826 |
Manual annotation
Study field | Cytoskelton |
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Gene name | Actin Domain Containing Gene21 |
Description | This gene model shows homology with Homo sapiens ARP1 actin related protein 1, alpha-centractin. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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arp1 actin-related protein 1 homolog centractin alpha | GO:0005524 GO:0005869 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.14057.t1 | gi|632984262|ref|XP_007909053.1| | PREDICTED: alpha-centractin isoform X2 [Callorhinchus milii] | 0.0 |
aug_v2a.14057.t1 | gi|697441137|ref|XP_009663929.1| | PREDICTED: alpha-centractin [Struthio camelus australis] | 0.0 |
Transcript
Transcript ID | aug_v2a.14057.t1 |
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Definition | - |
>aug_v2a.14057.t1 atatgcaactggtcgcaccacaggtgtagtgttagattctggtgatggggtctcccactctgtgccaatctacgaaggct ttgcaatgccacattccataatgaggacggatattgctggcaggtcagtgtgctttgaaaatgctgtcatgcaactgaat ccatttttgttgcttgtgaaaggcaaacagtggttttatttctcttgatttactgtacatcaaccttgtgtgcaatgtga agagctagtttttcatgttttttatttttttgtttaacagagatattacaacttttctaaggctgcttttaagaaaagaa ggtttcaactttcattcttcttcagagatggaaatagtgagaactattaaggaggtaaggcctaacactgttgctatggt attcatcagaagggtcagggttaaagaatcaagctcnnnnnnnnnnnnnnnnnnnnngaaatcatttgtgtgcattggtc attgattacagaagacttaaattctagatcatcaaaaaaagtaataataataattattgtttttgatgatcgggcattgt aataatttcatgctttcagctggtcaccaattagaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccatta ttgtgtatatacaactacttactgtaagatgctctagcagttgagttggtgcaaaatcagggaattttcttaattccttg tgcacgtgtcaaaggggcattgtgttaaggttattttacaaaacactgttatgtgactacagttttgaatttcattgcag cgtgtttgttacctggcattgaacccacagaaagaggtgagagcttgatatattttcataagtaatgtatagttaatttc aaagattgaagagaaatgtcttttaaatgtaatgttgaactctcactcaacaggaatcaatagatagtgaaagaatacag tacgtgttgccagatggaagcatgttggaggtaatgtgataaatagtcttggagatcacaggatcatctaaaaaaccttt ggaaaatgcattggtaggatttgatacatttcttttaccctgttatggttaactctggaaaagaatacttgttttatgtt tttaggttggtcctgcacgtttcagagcaccagaacttctctttagacctgatcttgtgggtgaagagtgtgaaggaatc catgaggtgggaatatgatccccttacaacatagtctctttatggataattaacaattattcgatgagttggccataatc atctcatatccaacaagcgcaagtggaataattattgttttattaaagatgcccccaagatatgagacaaatcttctaat aggtcaatgacttccctttcattcaacaccggcnnnnnnnnnnnnnnnnnnnnnnnnngaggagcgattttcgccggccg ccattgtttcttgagggaaaattttttagctcacttttaaatttacgctgactatatttggagattatggtatgttggct catataccataatggctaagccaataaaaagtcttgaattgcattatccaatggtccagtttttaataataccggtaata attattattgtcaagcaataggtagcatttcctgtgggtttactggcataattaacccatgcttgatgcaaggaggacat aagagaaagcttgtaaatcacaagtcaagagttctactgacatcccaagacagtgaattattcttgtaagcccatagcaa ataattattattgtattaaatgcatggccacttttctttcaatattgtaggtgctggcatttgcaattcaaaagtcagat ttggatctcagaagagttctgtattcaaatattgttctttctggtggatcaacactattcaaaggtaagaacagtttaaa aggtgatgaataattacctcactttgttttctctttgcataaatttaatgatttgtatctaaccttgtttttgcaggatt tggagatagactgttgagtgaagtaaagaaagttgcacctaaagatatcaaaattagggtatgaaatcttgagcattaat tttgggcatcagcgagtatttttttgacgataaacttacttataaggtactcaaacaaccagttctccttacatctcaat atttcaagcaagatttattgtagcagagacttgctccaaaacctgcaagtcacacaaaattgttttacttttgttagatt tctgctccacaagaaagactgtattcaacatggattgggtaggtttctcttgttgtggnnnnnnnnnnnnnnnnnnnnnn nnncattctttaatttggattcctgttgtcttttttcttgtttttaccttgttgaatctttttttggacttgatttaagt aaaaaaagattgttttggtgtgcgtccatgtaataccctttcaatatttaaactggttttttctttttacctttcagtgg ctcaattttagcttctttagacacatttaagaagatgtgggtctctaaaaaagaatatgacgatgaaggagcaagagcaa ttcatcgcaagaccttctaacttaatatatgattcctaacggttgtaatgcagtagatcagccgaagcttggttggaaaa ctaagctcggcagttactgtacatagagctgttagattgtcacaaaattgatattcgttctggatagagtctattctgta agagttcgtttgaaacagatgagcatggataaaatatttgaagttaagctgttttatggtggatctaagtgattcattct ttaaggactttaacaactgctcttccctgaactgaaaggatacgatccgtcaactttaagttatttcaatgacagcttaa agtagtggatttttcatggagttgggtattactttttaagctgtagaagctgtaagattagaaaggaaatttttaaacgt tcgctgttttgtggtcagatctggttcttatatctcctaaaaccaaaaaaaaaaaacttgcgtaaag |
Protein
Protein ID | aug_v2a.14057.t1 |
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Definition | - |
>aug_v2a.14057.t1 YATGRTTGVVLDSGDGVSHSVPIYEGFAMPHSIMRTDIAGRDITTFLRLLLRKEGFNFHSSSEMEIVRTIKERVCYLALN PQKEESIDSERIQYVLPDGSMLEVGPARFRAPELLFRPDLVGEECEGIHEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLF KGFGDRLLSEVKKVAPKDIKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYDDEGARAIHRKTF* |