Gene
Gene Model ID | aug_v2a.14570 |
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Locus | scaf6119 : 30556 ... 33057 : + |
To GenomeBrowser | scaf6119:30556..33057 |
Genes list of scaffold | scaf6119 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-Hand2 |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses (NJ and ML). Adi-Hand1 and Adi-Hand2 are aligned tandemly in the genome. Adi-Hand2 forms single clade with Nematostella Hand (Nem21) according to the molecular phylogenetic analysis. Nematostella Hand (Nem6 and Nem21) are also aligned tandemly in its genome (see Simionato et al., 2007). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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heart and neural crest derivatives expressed transcript 2 | GO:0003142 GO:0003144 GO:0003342 GO:0003677 GO:0006355 GO:0010002 GO:0030859 GO:0030878 GO:0035118 GO:0046983 GO:0048468 GO:0048703 GO:0055007 GO:0060047 GO:0071908 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.14570.t1 | gi|156383507|ref|XP_001632875.1| | predicted protein [Nematostella vectensis] | 1.0e-25 |
aug_v2a.14570.t1 | gi|10717017|gb|AAG22009.1|AF286646_1 | Hand2' [Xenopus laevis] | 2.0e-24 |
aug_v2a.14570.t1 | gi|270014677|gb|EFA11125.1| | hypothetical protein TcasGA2_TC004726 [Tribolium castaneum] | 2.0e-23 |
aug_v2a.14570.t1 | gi|594690994|ref|XP_007192842.1| | PREDICTED: heart- and neural crest derivatives-expressed protein 2, partial [Balaenoptera acutorostrata scammoni] | 4.0e-23 |
aug_v2a.14570.t1 | gi|54020670|ref|NP_571701.2| | heart- and neural crest derivatives-expressed protein 2 [Danio rerio] | 6.0e-23 |
Transcript
Transcript ID | aug_v2a.14570.t1 |
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Definition | - |
>aug_v2a.14570.t1 aagggaacggaaatttgccaaagatacccaaaaacccacaggcatacacgtgagcgacaactgatgaattctgggaaaga atctacaccaacagagaggtttttgacaacaatagcacctaccgttcggaagcgtttgtaataactattgtaaacttccg cggcagcagtgggcattgttgcgaatcaacagttgtcattacaaagtctccagaacttttttgattgcttgaacgatttg agtgttcgaacgcattcaaaggaaaaacatggacgatcacgaagccgagaggaccgatctcaacgacaatgaaagcactc ctgcttgtagaccagaagttattggtggctatcgaagacgaaaagctaaacccaagagtgcaacgagcaggaaggagcgg aggcgaactcaaaacatcaacgctgcgtttgaggacttgaggagacacattcccaatgttccatctgacactaagttgtc aaaaatcaaaactcttaagcttgcaatgagttacattcatcatttggaacatcaactggaggacgaggctcgcgagggcc aggaaattggaacgcctactgcacaatcaagtcccgatgaaacgagtcactctgacaataacatggcccaggcgaattat tcctgcaacagcaacaacgaccaagtggattcaccaaaggnnnnnnnnnnnnnnnnnnnnnnnnnnnncaggcgcgcttt taaatcaatgtaaacagcgaaataaagttttcaggtgctatgaccatgcaattttaattttgaaatctctcatacgtctt ttatgagacgacttcttgctcccaagggtcttcacgaccgccatttggctgtgcttattcactgatgctatcgactcaaa actgcaaagtgcgccactaaaatgaaaaaggtctgtgttttgtcgtagcacaaatcagctaattgtctctatggggttcc atccctcgtctttcttgcaaatggactgttaattctgaacatattatttcctcgagcatgcaggctgttgtaagatggct cagcatctctgattcgtgcacaggaattcacacaggcgctatatctacataacgcctttcttaagtcctggttgctgtgt tcttgttgtaagtaaccgttcagattaacctgctcgtcttagatttctctatcacttgttttgaaacagagtgatgatga aaaacagagctacaccgctccacctcgtcgcagctcgagaacaggttggccacagcatgtctgggctctggaactcatgg gcaacctcaaacaacaatcggtcgcgtaacagtttgtctgaatgaaggacaggaaaataaacacgagtacctttcttacc atgttcgacagctccactcgatcaaaacgagtcatggagagtttataaaaactttaaagtcattcctcactgtcgttgac aacaaactaaagaacaatttctgttgacgcactcaactagagggcacataagcaactcaaagaaatgcagagaacacctg aaacctcataaacaaattgttattcttgctacgaaatgaagtctacggagtaatctcgtattttcaatgatcaagccgtt tcgattgaggtgcctgcacgggtaagcaacttggtacaatcatcatttagtcttctcatttgaggtaaacgctactttaa atgcttgggcaattttcacctgtaaaattcgagtaacgataatgatacataataaacgctcaccattgaaatgctctgag ctgctgaggattcttaacctaagaagttccattcacaagtgtggactgactgtcttcatgtcgtcgcacgcaaatgtttt ccaagacttcatctaactcaattttgggtgtttcatttagcatgtaaccatgaaccaactgaacagtgaagtaaaaagtt gattttttttacattttcagacctatgccttatccgattttcttagtttattcgtgatattaaacagggacgttaggcaa actcattggacaatggccagaacagaagacactcaaaatgtcgacctgtcataggatacatccgagctaagaagtttgtc gatgaatcatttcttgatttctaaacaaatatcaacaaacacagctgaatcagcgaagagcaaggtcccagttactcccg gataggttttaacgaaaatttgctccaaagtaacaggaggctcgcttcgtgtaacctctgaggtatagtgccttttcaac tatttcttcaatttccaccttagagacgacttaacatcgatggatcaagggtataagaaatacagtaacaaatatttttt ctacctgccttattattacaacaatttcgtccacagaaaccattctatttctcgtaaacccggcaagcatttcagttctt tttaaatagagagtaaactttaaggcattgtgcagtccaaaagtgcttgttataaatttgtaagcaatattaagaacttt gtaataaaatggaaaattgacg |
Protein
Protein ID | aug_v2a.14570.t1 |
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Definition | - |
>aug_v2a.14570.t1 MDDHEAERTDLNDNESTPACRPEVIGGYRRRKAKPKSATSRKERRRTQNINAAFEDLRRHIPNVPSDTKLSKIKTLKLAM SYIHHLEHQLEDEAREGQEIGTPTAQSSPDETSHSDNNMAQANYSCNSNNDQSDDEKQSYTAPPRRSSRTGWPQHVWALE LMGNLKQQSVA* |