Gene
Gene Model ID | aug_v2a.14589 |
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Locus | scaf6125 : 15425 ... 16995 : - |
To GenomeBrowser | scaf6125:15425..16995 |
Genes list of scaffold | scaf6125 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-HES2 |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses. This gene model has WRPW motif in its C-terminal region. This gene model has Hairy Orange domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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transcription factor hes-1 | GO:0001568 GO:0002065 GO:0003007 GO:0005515 GO:0006355 GO:0007165 GO:0007420 GO:0030182 GO:0035295 GO:0043009 GO:0048522 GO:0048839 GO:0050768 GO:0072006 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.14589.t1 | gi|560957333|ref|XP_006201141.1| | PREDICTED: transcription factor HES-1 [Vicugna pacos] | 2.0e-38 |
aug_v2a.14589.t1 | gi|511978064|ref|XP_004806928.1| | 5.0e-37 |
Transcript
Transcript ID | aug_v2a.14589.t1 |
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Definition | - |
>aug_v2a.14589.t1 ttcgctgcaaacaatcaacgattaaagaagtcagaaacaaatttcaccgagacccaaaactttgaacgagaaaacatggc cgttgaatgtatcggcagttctatgtatgtgagcaaaatcctctctgaaaggagaaaggtaagcgttcatttttatgcgt aattcatcattttttaattgctgatttgacattttagcccacacaagctaaagcaaatttctaagttcattattaaaagc cacaacatttttctttaggctaaaaagcctcttatggagaaaatgcgacgagcaagaattaatgacagtttaaacgagct caagaacctggtcttggatcttctccagaaagatgtaagtaatattttagtttcatgttcacgcaaaatgtaaactggtt gtaacgttggagaacgtaagataagatgctgcttaaaagtttaatattgggagacgcctttgctaatgatttgttttcta tcgtctaggcttcacgttattcgaagatggaaaaagctgacgttttagaaatgacggtgacttacttaagagccatgcaa cgaaagggtgtccgaggagaaggtgagattaagaggaacttaatttttcgctccactcatcctcagcatctaaacgatat tttcacggagatgtgatttggaaatttcaaatagtaatgaatgtcctttcccattcagttcgcttgcttcgttactgcat ggcgtaccatttgcaaatacatatctcaacagtgcaaagcagtgaataatgtaattgtcaattgcaagcgggatggaaat ataacgagacttgttaatttttttgtagattacaaggctatggccgattacagagctggttttaatcaatgtgcaaacga agtaaacagaaacattttggcgaaagaggccaatgcaccactcagagaaaaactcttgaatcacttggcatcatgctgcc atggcaacgcaagaagccgtgtcatcacgagccacccaccgggggctcccgaaatgacaccaagttttcccgccagttca ccaaacgccgtctgggttccgtatccatcgccgcctccatcgccacaaaacaagtctgccgtctttgtgcatgccaaccc ggctcaatctgaaatcccaacgattcattcttctattggtacacccgttgctcaagttacgaggggaagcctttcgccgg tgaattcaccgagcgcaacgacgaaagcccctctttggcggccgtggtgaacaaaacaaaacacgacatatagaatgaat tcctttaaatttgacccataattaagcgaaatgtcaagcaaccacgtgcttattagcaatttgttttgcggtaaacagct gtcgctttaaccccggttctaaattattattttggtttttatttttattacaaagtactgtatattgcctttggccagag attttataacagaatagaatgtgtattatttataaggttcgaatgtctgcttggcggtttttaagttaacaaagaaaaag agagaccgataaattccagattaaattaattaaacatgaagttatttaatt |
Protein
Protein ID | aug_v2a.14589.t1 |
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Definition | - |
>aug_v2a.14589.t1 MAVECIGSSMYVSKILSERRKAKKPLMEKMRRARINDSLNELKNLVLDLLQKDASRYSKMEKADVLEMTVTYLRAMQRKG VRGEDYKAMADYRAGFNQCANEVNRNILAKEANAPLREKLLNHLASCCHGNARSRVITSHPPGAPEMTPSFPASSPNAVW VPYPSPPPSPQNKSAVFVHANPAQSEIPTIHSSIGTPVAQVTRGSLSPVNSPSATTKAPLWRPW* |