Gene
Gene Model ID | aug_v2a.15312 |
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Locus | scaf6483 : 1 ... 4655 : - |
To GenomeBrowser | scaf6483:1..4655 |
Genes list of scaffold | scaf6483 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-47 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.15312.t1 | gi|704276158|ref|XP_010155665.1| | PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28, partial [Eurypyga helias] | 0.0 |
Transcript
Transcript ID | aug_v2a.15312.t1 |
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Definition | - |
>aug_v2a.15312.t1 agatttctggatggctcgtacttggtgaacagatcggaaatataggaaggtgcttgaccatttaatgctttataatagaa ggagtaagggttaagagtagagtaaggagcgagaattannnnntcggtttggtgaaggccgtgaggcgcccaaacttgac atccgccgtatcacaaaaatatttatcggatgaaactaaaatttatatttccatgaatagagtacctagggtagtctaca gaattttgggggggatttttcaaaattttgataattcccacccatggtcgatatttacagacatcccctcttaatgcttt ataatagaaggagtaagggttaagagtagagtaaggagcgagaattgatgtaagtggagacaaattccaaatacaaatgg taccacagtccccgtgaggtgcttttgaagtaattcagagtctgggtaggtttcgcaaggcgagcagctccacacaatac atattagtgctgtcataaagaagtaaaaggcaaaaaaataacagcaattatgaatccaaaaacagaagctgaatctcgaa tacccaaaaattgatcggcgttggaaagccaaaaaagttaagccaaaaaactctatcacatctgttgacaacgcttcctt taccaaatgttcctccagctattactcatgccatttcttttttcctttttttcaccaattaattattcatttacttgttt ttcttttgtagaaagaaatagataaccaacacagaagtggaagagtctatatcaaacgcagtgcagatttctagtaatga ctgacattaaaaaagccattaagtactttcaaaaacaattgacaactgcaatagaaaatggtgatcggggcgggaaagga ggagcctatggaaatctcggtattgcttaccactcactgggtgactgtcgaagagccactgagtattatgaaaaatgttt gaaaattgcaagagaaattggtgatcggggcggagaaggaggagcctatggaagtctcggtattgcttaccactcactgg gtgactatcgaaaagccattgagtatcatgaaaaacatttgaaaattgcaatagaaattggtgataggggcggagaagga ggagcctatggaaatctcggtaatgcttaccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaccag tcactgggtgactatcaaaaagcgattcagtttcatgaaaaacatttgaaaattgcaacagaaattggtgatcggagtgg agaaggaggagcctatggaagtctcggtaatgcttaccagtcactgggtgactatcgaaaagccatcgtgtttcatgaga aaaatttaaaaattgcaattgagattggtgatcaggccagagaaggaaaaacttatcacaacattggaactgccctctct tgtcttgaagaaattgaaaacgcagtggataattttgtgtccgctgtggatgtctttaattctttgagatctctattgaa ggctcaagataactggaaaataaggtttcgtgagatgcacgaagcagcgtacaatgctttatgggtgtcgttactaagaa ttaaaaagatcgatgaagctttgtttgcggctgaccaaggacgagcccagactttgtgtgacaatttgttgctccaatat aaacttgatccatccttatcatcagcggcagttgacagcaaagagacagtatgttgcctcttgacaaagctttcctcgcc aactctttttctcgcaattaaaggctttacggccaacatttggtttctgagaaagggaaagaaaattatattgcggaaag ggaggctggagggtgacaaaagagagaaagatcctttatttgccttactgcaatcatctttagaaaaaatcggagctgaa gatacaaaaagatgtgaagatcgtacatttgatgaacttgaaaatgaatgcttgcttagcatagaagtgcggggtgaagg agttggaaaaccaccattgccgtctttagataatccctttaagccattttatgatgcagttattgatccaattcttgaca agcttgaacctcaaaacgacgagttggtcattgtttctgatggtgtgctgtgctttattccatgggccgcagttactgaa tcgattagggtccgcattgttccatcactgacaagttatcaactgatcttaagtgcacccgaaggacatcacaggaagaa gggggcgcttttggtcggaaatccctgcttaaaagagttgaagaaacccttagacgacttaccatgtgctcaagaagaag tagaaatgattgcatcaattctcaagaccacacctctgacagggatacatgcaacaaaagctgaagtgatgaaacggatg tcgtcagttggcgcaattcatattgctgcccacggaaaccagcgcactggggaaattgctttgtctccaaatcctggatg gtcttcaaagttccctcacataaaggattacattttaaaaatgtccgatgtgcaggctgccaatcttcgagctcgtcttg tagtgctaagttgctgtcacagtggacgaggcagagtcttgaagggtgagggtgtggtcggtatcgcacgtgcctttttg gcagctggtgctcgttctgtgttggtggccctatgggcaatagatgacgaggctaccatgatgtttatgaaaagtttcta ccaacacctaaaggaaggaaaaaccgccagtgctgccgttcagcaatcgatgaaattacttcgtgagtctgagcagtttt ctcagatgaagtactgggctccattccaactaatcggagatgacgttaagattgaattcgaggaggatgacaacgtcaaa aaatgagagtaaaaagtttttttcagtttctctgtcagcataataaccggcgtaataggcttctctggctgtcttacttt tcggtaaagccacgtaacagaacagttgcgataatatgcaatggttaagcggtattagttgactctttcgtcggagcagc gtgattcttgtgagt |
Protein
Protein ID | aug_v2a.15312.t1 |
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Definition | - |
>aug_v2a.15312.t1 MTDIKKAIKYFQKQLTTAIENGDRGGKGGAYGNLGIAYHSLGDCRRATEYYEKCLKIAREIGDRGGEGGAYGSLGIAYHS LGDYRKAIEYHEKHLKIAIEIGDRGGEGGAYGNLEIGDRSGEGGAYGSLGNAYQSLGDYRKAIVFHEKNLKIAIEIGDQA REGKTYHNIGTALSCLEEIENAVDNFVSAVDVFNSLRSLLKAQDNWKIRFREMHEAAYNALWVSLLRIKKIDEALFAADQ GRAQTLCDNLLLQYKLDPSLSSAAVDSKETVCCLLTKLSSPTLFLAIKGFTANIWFLRKGKKIILRKGRLEGDKREKDPL FALLQSSLEKIGAEDTKRCEDRTFDELENECLLSIEVRGEGVGKPPLPSLDNPFKPFYDAVIDPILDKLEPQNDELVIVS DGVLCFIPWAAVTESIRVRIVPSLTSYQLILSAPEGHHRKKGALLVGNPCLKELKKPLDDLPCAQEEVEMIASILKTTPL TGIHATKAEVMKRMSSVGAIHIAAHGNQRTGEIALSPNPGWSSKFPHIKDYILKMSDVQAANLRARLVVLSCCHSGRGRV LKGEGVVGIARAFLAAGARSVLVALWAIDDEATMMFMKSFYQHLKEGKTASAAVQQSMKLLRESEQFSQMKYWAPFQLIG DDVKIEFEEDDNVKK* |