Gene
Gene Model ID | aug_v2a.15442 |
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Locus | scaf6581 : 5536 ... 8137 : + |
To GenomeBrowser | scaf6581:5536..8137 |
Genes list of scaffold | scaf6581 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 3-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 3-1. This gene model has RVP, RVP_2 and RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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enzymatic polyprotein endonuclease reverse | GO:0016740 GO:0090304 |
Transcript
Transcript ID | aug_v2a.15442.t1 |
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Definition | - |
>aug_v2a.15442.t1 aagataattcagttatttcgtcacaagaaattcaagtttttcccgccgaagccagtatgtgtgtgtcccccgaatttagg ccgtgtagtacagaacctgtcattcacgtaagcaaaccaaatgtacaagagtctgttgttttctacactgtggagacgga acccccagacgctgaagtagtgcaaagcccgtgcacgtttatcgaaccagtagttttatgtcgtgaacttcatgtggaaa cagccacatcctgtgttttggatagtacatttcacacatgtcatagtccggaacccgcggttaataggagtgtcaacgtt aatgcctcgcatccgtcacgcacccattgcgaaaccagaagtgtcagtgaaaatcctggcgtatcacaagttaagttagt ccattttcttttgagaatactttgttcctattacggaaaggacacactgaggaaaaaccttttggccaaaatcacccatg ttaaacaaactattggcgctagcatcccttcggttcagatggctgatctgcgaaaagaagaccaagacccaaccaaattt accacagacagtttaccggtttgtcctagtgttaacgaagatcacttgttatgccctgaggtcaaggtcgattgtttaaa tgacgtttacgaagttaatgaccgatttatagccctcgtaagtcacgatactctgccactgtcacgcgaaaccaataatg tttcaattaatggaagtgtttgtgatacagagctcacgtttttagtagacacaggcgctaacgtcactgctattaaagca gatatttggcgacagattccacccccgactaaacatcctacatctcaagcgacgattagtcacattaagtcggttagcgg agagtcgattccagtgttaggtcaagttgaagtacctttccacattaattctagaagctatcctttcaaggccttgctaa ttgaagctatggcttatgacgcaatactaggtcgcgatttcctagagttttataaagcgaagattgacttcgagaggcgc actttaaccctcgaaggtgtttccagtcctttcgatgaatttgacctagagaccaatacaaaacatttggaaccaggggt gttcgctgtgcatgcccagtcctcatttataattccaccctgcaccgaaatcattgtaccaggcgaactggattctagct gtgtagtagcatcaactgcacttttacagcctcgacccgaactaccggaacgttaccaaataatgggagcggcgcagttg gttaaggtttctaataacaatttcatcccagttagactactaaatccaacctcccaaccgattcacatctatcgtaaaac gaaactggccgaaatctcgttagttgacccagagattgccacttatgaattagtaagatcagatctcgaagcggaggcaa atcgcgatattcctggaaacaaccctccggttcggcttaggtcttatcgcacgtctccacccaacaaagaagaaattgac cgacaaatcgaggaaatgttgggaaacaatatcatttcaccctcagtatccccgtggagttcgcctgtggtactggtgaa gaaatctgacggcactatgcatttttgtatcgattataggaaattgaaccaaattactcgaaaggatagccaccctctgc ctagaataacagaggcactcgattccctaggtggggcacattacttttctaccctcgacctccggtctgggtactggcag atcgaaatggaggatgactcgaaggagaagaccgctttcatcacccacaacggcctttacgagtttaatgcactcccgtt tggtctctgtaacagtccagctaccttccaaagagtaatgacgcatgtattaaggggtttagagtgggatatctgtcttg tatacattgatgacctcattattttttcgcgcagttttgataaccacttgcttcacctagaacaagtttttaaacgctta cgggaagcgaaccttcgtctcaagcccagcaagtgccatttcgttaaatctgaggttgaatacttaggacatgtcgtttc agcagatggtttgaagccaaatcccgccaaaattcgagctgttcaggaattcccagttccgaacaatgttactggagtta aggcatttttaggcttgtgcaactattaccgccggtttatcaaaggttttgcccaaattgcctctcctttaaacaagcta acgagcaagaacattcaatttgactggactccagaatgtcaaacttcatttgactgtcttaaaaacgcactagtgtcggc ccccatccttgcctacccagatttcgagttgcgtttccatctttacgtggacgccagccgtaccggtatcggattaactt taggacaaattattgacggaaaggaacgagtcattgcgtacgctgggagagacttcaaccaggccgagcgtaattatagt gcaactgagcgagaagcgcttgccgtcattgatggcattaagcgattccagccatacttacacggacgaaagttcacaat tcataccgatcataacgctttaaagtggctaatgtctataca |
Protein
Protein ID | aug_v2a.15442.t1 |
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Definition | - |
>aug_v2a.15442.t1 MCVSPEFRPCSTEPVIHVSKPNVQESVVFYTVETEPPDAEVVQSPCTFIEPVVLCRELHVETATSCVLDSTFHTCHSPEP AVNRSVNVNASHPSRTHCETRSVSENPGVSQVKLVHFLLRILCSYYGKDTLRKNLLAKITHVKQTIGASIPSVQMADLRK EDQDPTKFTTDSLPVCPSVNEDHLLCPEVKVDCLNDVYEVNDRFIALVSHDTLPLSRETNNVSINGSVCDTELTFLVDTG ANVTAIKADIWRQIPPPTKHPTSQATISHIKSVSGESIPVLGQVEVPFHINSRSYPFKALLIEAMAYDAILGRDFLEFYK AKIDFERRTLTLEGVSSPFDEFDLETNTKHLEPGVFAVHAQSSFIIPPCTEIIVPGELDSSCVVASTALLQPRPELPERY QIMGAAQLVKVSNNNFIPVRLLNPTSQPIHIYRKTKLAEISLVDPEIATYELVRSDLEAEANRDIPGNNPPVRLRSYRTS PPNKEEIDRQIEEMLGNNIISPSVSPWSSPVVLVKKSDGTMHFCIDYRKLNQITRKDSHPLPRITEALDSLGGAHYFSTL DLRSGYWQIEMEDDSKEKTAFITHNGLYEFNALPFGLCNSPATFQRVMTHVLRGLEWDICLVYIDDLIIFSRSFDNHLLH LEQVFKRLREANLRLKPSKCHFVKSEVEYLGHVVSADGLKPNPAKIRAVQEFPVPNNVTGVKAFLGLCNYYRRFIKGFAQ IASPLNKLTSKNIQFDWTPECQTSFDCLKNALVSAPILAYPDFELRFHLYVDASRTGIGLTLGQIIDGKERVIAYAGRDF NQAERNYSATEREALAVIDGIKRFQPYLHGRKFTIHTDHNALKWLMSI |