Gene
Gene Model ID | aug_v2a.15465 |
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Locus | scaf6609 : 10707 ... 14905 : - |
To GenomeBrowser | scaf6609:10707..14905 |
Genes list of scaffold | scaf6609 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 3-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 3-1. This gene model contains RVP and RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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uncharacterized protein loc101478033 | GO:0003824 |
Transcript
Transcript ID | aug_v2a.15465.t1 |
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Definition | - |
>aug_v2a.15465.t1 aatacagtttgcgcgatcacgagccgcaccacaggaatttccgcccgcaacaaatagaagagagtgataatgacattaat agggaagatttaaccactttaccgaaaccagtcaagtttttcccgccgaagccagtatgtgtgtgtcccccgaattaaga ccatgtattacagaacctgtcattcacgtaagcaaaccaaatgtacaagagtctgttgttttctacactgtggagacgga actctctgacgccgaagtagtgcagagcccgtgcacgtttatcgaaccagtagttttgtgtcgtgaacttcatgtggaaa cagccacatcctgtgttttggatagtacatttcacacatgtcatagtccggaacccgcggttaataggagtgtcaacgtt aatgcctcgcatccgtcacgcacccattgcgaaaccagaagtgtcagtgaaaatcctggcgtatcacaagttaagttagt ccattttcttttgagaatactttgttcctattacggaaaggacacactgaagaaaaaccttttggccaagatcacccatg ttaaacaaactatcggcgttagcatcccttcggttcagatggctgatctgcgaaaagaagaccaagccccaaccaaattt accacagacagtttaccggtttgtcctagtgttaacaaagatcacttgctgccctctgaggtcaaggtcgattgtttaaa tgacgtctatgaagttaatgaccgatttatagccctcgtaagtcacgatactctgccactgtcacgcgataccaataatg tttcaattaatggaagtgtttgtgatactgagctcacgtttttagtagacacaggcgctaacgtcactgcgattaaagca gatatttggcgacagattccacccccgactaaacatcctacatctcaaacgacgattagtcacattaagtcggttagcgg agagtcgatcccagtgctaggtcaagttgaagtacctttccacattaattctagaagctatcctttcaaggccttgctaa ttgaaactatggcttatgacgcaatactagctcgcgatttcctagagttttacaaagcgaagattgacttcgagcggcgc actttaactctcgaaggtgattccagtcctttcgatgaatttgacctagagaccaatacaaaacatttggaaccaggggt gttcgctgtgcatgcccagtcctcatttataattccaccctgcaccgaaatcattgtaccaggcgaactggattctagct gtgtagtagcatcaactgcacttttggagcctcgacccgaattaccaaaacgttaccaaataatgggagcggcgcagttg gttaaggtttctaataacacttccattccagttagacttctaaatccaacctcccaaccgattcacatctatcgtagaac aaaactggccgaaatctcgttagtcgacccagagattgccacttatgaattagtaagatcagatctcgaagcggaggcaa atcgcgatattcctactgctgtggatgctgaaccccgagtacccctagacgtcggtaatgttggtttaacccatacgcaa cgaactcggcttcaggcccttctcacgcggtacgatgatatttttgcatacacgccggaccaattgggcagatgttcagt tgtgaaacatcgaatcgacactggaaaccaccctccagttcggcttaggtcttatcgcacgtctccacccaacaaagaag aaattgaccgacaaatcgaggaaatgttaggaaacaatatcatttcgccctcagtatctccgtggagttcgcctgtggta ctggtgaagaaatctgacggcactatgcgtttttgtatcgattataggaaattgaaccaaattactcgaaaggatagcca ccctctgcctagaataacggaggcactcgattccctaggtggggcacattacttttctaccctcgacctccggtctgggt actggcagatcgaaatggaggatgactcgaaggagaagaccgctttcatcacccacaatggcctctacgagtttaatgca ctcccgtttggtctctgtaacagtccagctaccttccaaagagtaatgacgcatgttttaaggggtttagagtgggatat ctgtcttgtatatattgatgacctcattattttttcgggcagttttgataaccacttgcttcacctagaacaagtcttta aacgcttacgggaagcgaaccttcgtctcaagcccagcaagtgccatttcgttaaatctgaggttgaatacttaggacat gtcgtttcagcagatggtttgaagccaaatcccgccaaaattcgagctgttcaggaattcccagttccgaacaatgttac gggagttaaggcatttttaggcttgtgcaactattaccgccggtttatcaaaggttttgcccaaattgcctctcctttaa acaagctaacgagcaagaacattcaatttgactggacccctgaatgtcaaacttcatttgactgtcttaagaacgcacta gtgtcggcccccatccttgcctacccagatttcgagttgcctttccatctttacgtagacgccagccataccggtatcgg attaactttaggacaaattattgacggaaaggaactagtcattgcgtacgctgggagagacttcagccaggccgagcgta attatagtgcaactgagcgagaagcgcttgccgtcattgatggcattaagcgattccagccatacttacacggacgaaag ttcacaattcataccgatcataacgctttaaagtggctcatgtctatcccannnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatg ccagacactgtcgatgtttgttagtaaacaccaaaaagactgggataccttcattccagccgccttgctcgccattagaa cctccccatctgaatccaccggggaaagtccattttacatactttacggaagggaacctctacttcctatggatgtcagt ttgttaccaccatctgatccagctagctccattgaagaacatcgtcggaaaattgtcaaacaaattgagttagctcagca aattgcgaaggaaaatatcatgcgagcacaacagaaaatgaaaacgtattatgatcaacatgcatctgagccaaatttcg ttaaggggcacaaagtctgggtctttacccccaaaacttataagggattgtccaaaaaattattacacaattatcacggg ccattccgggttgttgaaaaacttagcccggtccactaccggttgcgctcatgtaccaacaaaccggttagttcgatagt tcacgcaaaccgcatgaaacattttgtggacccaaatgaccggccgatcgaaccgccttcgaattttagatccccgattg cttgaagattttctttcacggaccactgcctctacataatattatctcctgctctcaattgttgttataaccacgtaacc attaccttaggccaaatcccaaatcttttgttcgacatt |
Protein
Protein ID | aug_v2a.15465.t1 |
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Definition | - |
>aug_v2a.15465.t1 MCVSPELRPCITEPVIHVSKPNVQESVVFYTVETELSDAEVVQSPCTFIEPVVLCRELHVETATSCVLDSTFHTCHSPEP AVNRSVNVNASHPSRTHCETRSVSENPGVSQVKLVHFLLRILCSYYGKDTLKKNLLAKITHVKQTIGVSIPSVQMADLRK EDQAPTKFTTDSLPVCPSVNKDHLLPSEVKVDCLNDVYEVNDRFIALVSHDTLPLSRDTNNVSINGSVCDTELTFLVDTG ANVTAIKADIWRQIPPPTKHPTSQTTISHIKSVSGESIPVLGQVEVPFHINSRSYPFKALLIETMAYDAILARDFLEFYK AKIDFERRTLTLEGDSSPFDEFDLETNTKHLEPGVFAVHAQSSFIIPPCTEIIVPGELDSSCVVASTALLEPRPELPKRY QIMGAAQLVKVSNNTSIPVRLLNPTSQPIHIYRRTKLAEISLVDPEIATYELVRSDLEAEANRDIPTAVDAEPRVPLDVG NVGLTHTQRTRLQALLTRYDDIFAYTPDQLGRCSVVKHRIDTGNHPPVRLRSYRTSPPNKEEIDRQIEEMLGNNIISPSV SPWSSPVVLVKKSDGTMRFCIDYRKLNQITRKDSHPLPRITEALDSLGGAHYFSTLDLRSGYWQIEMEDDSKEKTAFITH NGLYEFNALPFGLCNSPATFQRVMTHVLRGLEWDICLVYIDDLIIFSGSFDNHLLHLEQVFKRLREANLRLKPSKCHFVK SEVEYLGHVVSADGLKPNPAKIRAVQEFPVPNNVTGVKAFLGLCNYYRRFIKGFAQIASPLNKLTSKNIQFDWTPECQTS FDCLKNALVSAPILAYPDFELPFHLYVDASHTGIGLTLGQIIDGKELVIAYAGRDFSQAERNYSATEREALATLSMFVSK HQKDWDTFIPAALLAIRTSPSESTGESPFYILYGREPLLPMDVSLLPPSDPASSIEEHRRKIVKQIELAQQIAKENIMRA QQKMKTYYDQHASEPNFVKGHKVWVFTPKTYKGLSKKLLHNYHGPFRVVEKLSPVHYRLRSCTNKPVSSIVHANRMKHFV DPNDRPIEPPSNFRSPIA* |