Gene
Gene Model ID | aug_v2a.15580 |
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Locus | scaf6764 : 60 ... 11548 : + |
To GenomeBrowser | scaf6764:60..11548 |
Genes list of scaffold | scaf6764 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 37-7 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 37-1. This gene model contains Laminin_G_2 and Laminin_G_1 domains. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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contactin-associated 4 isoform x1 | GO:0016020 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.15580.t1 | gi|156371641|ref|XP_001628871.1| | predicted protein [Nematostella vectensis] | 2.0e-22 |
aug_v2a.15580.t1 | gi|617623092|ref|XP_007527625.1| | PREDICTED: contactin-associated protein-like 4 isoform X1 [Erinaceus europaeus] | 2.0e-14 |
aug_v2a.15580.t1 | gi|724857882|ref|XP_010368510.1| | PREDICTED: contactin-associated protein-like 4, partial [Rhinopithecus roxellana] | 2.0e-14 |
aug_v2a.15580.t1 | gi|617623095|ref|XP_007527626.1| | PREDICTED: contactin-associated protein-like 4 isoform X2 [Erinaceus europaeus] | 2.0e-14 |
Transcript
Transcript ID | aug_v2a.15580.t1 |
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Definition | - |
>aug_v2a.15580.t1 acctctgaagaaccattttactgttttcttagtggtggtgcaagtgtaggtaaatcttactaaagccttgtatcaggctg cattgaagtattacaatacaacattaattttaatgagacaaaagtattgatgttggcccctacaggtaaagcagcattat ataaagggaaatactattcatagtgctttagcaataccagcttgtcagtcattgaagaactatgaaagtcttgattcaag taggcttaattaacacgctaagaagtcaaattggtagactaaaactgatgttcatagatgaaatatcagtggttggtaac actatgttcacagtacaaatatgtaatagctgacttaaagatatcaaaggcagttcactaccatttggtggtgtcagtat atttagttgctattggggatttattccaactacaaccagtcatggatggttatatatttaaaaatatggacaatgatgaa tatggtgttcttgctcctaatgtgtggcaagaactttttaaaatgtttgaattcaaacaaatcatgagacaaagagaaag taaagactttgctgaattattgaatagattaagagaaggaaatcacactaaccaatatattcagaaattaaaacaattaa agcattattagtattactaatcgtgaatatcctaaagatgctccacatgtcttcattcaaaatgccaaagtgaatgactt taatgctagagcacacaatgctctaatccaggtataaaatactctattaaagcacacgattaagtgttataggagctgat tcacagaaactcagagataagatactcagtcaaatacctaatgaccctagaaaaacaaaacaattgcattcagtgctgca gttagcagttggcgaaagaacagagatatctctgaataccagaactgatgacggtatgaatggtgctggtaatgttatca aattaatacaagtacagccaacaggcacaccaactggtgtgatatgggtacaatttgaccatcctgatgttggtcaaaca acaaggcaagataatagacaattgtacattaatggtattcaaccaatatggtcacatatcaaaaagcgattacaacacaa tttgctgttgggacaacaagatctgttcaggtcgtaagaaaacagttcccactgagacctgctgctgctaaaactatatc catagaattcacaaggtgatactgaatctagaatagtagttaaccttgaaacaagaagggcaattcctcacatacattat gtgggactaagtcgtgtgacaagaataaatgatttatttatcacagacctttgtgaagataaaatagctgtgagtaatga tgtccaaacaaagatgtaacgatttagaacagaagggcagctgccactctcaataaaacccatttatgaagcaccaaata atagtatcaaaatctgtttcctgaatgcacgatcattacatttaaacacatagatgacatacgtcatgacttgaattact tgagcactgatgtgaatattttctcagagacaaggttttctcaactagatgatgacaatttatatgatataaagaattac acactattcaggaatgatgatacaactagagtatcacaaaatacaagaccttttggaggcatggcagtttatagtcgtct tgattattatccaggatacccatattgtgccaatacaaatggtgttgaaataactgttatcagattaatgatcatgcctc atatatctatagtgggtgtatgcggatcaccagcagtaccaattacacaattatatgtagtgctgtccagcatatgcttg attgtttgccaactcaagttaatatttttattggagacttaaatgtaaattactttaatagctcacagagtgcatcactc attaatttatttgtaaatgacaagaattatagacaactggtttgaacctttacaactgacagaaatacttgtattgatca catctatactataatttgtctgaatcacaaatacatgcagtttcagattctagaaacctgtttttcagatcacaaaacca tttgtgtattggttaccttttaagcaggtagttttgttttcttacttacagacattatatattatccatcaattgtgatt aagtttacaacaagggcagctaaataattacattatggcatgtcatttacagattaatcagcttggatttcaacttgact taaaaaagaaagatgcctgcaaaaccaacatcaaacagcacaaaacgcacaccatcatcacaaggttcaaaggaacccac tacaccatcatatcgagcccaagaacccactacattatcatgagccgaaaaacccactacaccatcacgagcccaagaac ccactacaccatcacaagccgaaaaacccactacactatcacgagccctcaagacaccatattttgagtgccttgctcag acaagcaacgcgtccaaagttagagcagtgtcctattaaaccaaaaagcgaaccactttgcatcaagcttatagttccaa atcgcctgtaaagattagtggagtgaaacgactaccttccacaggtttcagtgactcgttgaaagnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaataaagattctaactaccat tgaaggaaccaccatccaccaagaccaagacatctatgatattaacatggattgtgaagacataagccttagcttaaaca tttcagaaggaaaatgtatctcagcaaaactcaaaagagaattatcctgcattgcttgtaatgcatgtattaaaggcata gcagcagacggcatgatcacgtgtcagaactgccaaatgactaccctagaagaaaaccgcagccataagcttgtagcaca attaatgatcttaacagcaaaaggaaaggttcaaagttacacatgatgctttgcagagcttcctagcatcaagcaacaca aacttgataattgacaccattgatctggatgaattggaaaaactgctgctaacatctccagccaagaaaatgattataga tgattcgacaaaaactataacccaatttctactataattgaactataagagaaaaacaacattgcacctcaaaaacattt tgaacattatcaaattggagttaagtaagttcaaatagttgagttacagttctataaattacagnnnnnnnnnnnnnnnn nnnnnnngtcattttgatcatgagaaataggattgactgtttgattaatcgacagtgttgacatgctacagtcagaaatt aaaatagttgagttacagttccataaattacagagaattattattatttactttgattgtgacaattatacattgactga tcaactacattttacagtcagaatatatgcaaatgtttgtacaagttgtacttttgttggtactgttaataaaactaatt gttgaagaaacttataactatacaaactgttggcttgtatattcactcagtattgcgttattaaccgcagctttgtgtta ttaatacacagctttataaaccaaaatccaagttatgtttatccagtttttctgatgaaatgtgcaatgtccactcacac tcaagcctggatcttttaaggttttatttaactttttgttgcagcatctcgtcagtttactggtgaaggttacatggagt atagaacaacctcaggcaatatcattaactctgtaaaggatgagttgcgtattgaattcagcacagtacagccctctggt ctactcttttatgccagaaactcaggaggacaatttgcagactatgttgctcttgaacttgtcggtgggagattgaggta tgtccttttaactgtttatgacatgtgccctgaggctaggtataacttttaaaatcctcacccttagctaacagggcttc tgatatattgatgtgatggtgtatttttgcacaatggacctcaaattgcatctgatcgcataattcatgagatatcgtag cataatttacgaagaattgcgcaatttttcaaaaataaaccaaagtacactttctcttaaaaaaaaacacatctatccat cattttaaagatttgtgtatcttttgaggggtgcagactctctcaagttttatttgtaaacaatcaaagttcaaggggct catatcaatttttggcagtaatgagccctggttttagttttcaatctgaaagagttgcctattggtgtagccatagttag cacaagaaacaaagagtgcccctttgaagtttgccaggttttatattatgaaacccatcccacagactgatgttttgttc acttgagcgaagttgaccacctttgccagtggttgaagaagagaagaaaaggaacttaactaaaataatgttgacacatg aacacaataataatggtatactttagtcaaacactgcttttactgtcaatgatattgatctagttctcctttggattgtt ttgaactataattgttataatggaataatattttcaagagctcatgatatttccaactgtgatgaactatgattgcttcc aggcatgcatttcaagtctcaaaactaacaaaacttgtgcatacaaaataataattaaactgtcagctaatttcatatgt atgtagtgtaatcgtgcttcgatcgatcctatccagtaaagttgaaccaaggtcatggataagactttgcatcagcatag ttagttacctgatttgtctttttaatcaaatttgagcatagatgcttaatggtttgcaaattcattattatcgttccctc atgtttaaatattattgtcttaatagcaacacagaagtggtttccttactctaaaacccagtaaaacaagctcaaaataa gtcaaggaaaacgtgcaccacttgcatagcttaatctgtcctgaaattttgcacagtttctgtcttataatcacaccata tcagaaggtctgtaggtaaatgtgcaatgtttgcagaggttcccaggagtgcacgtggtagctcaccgcgcaccgatagc tcagttggttgagcatcagtctgtcaggtgggaggtcgtgagttcgagtccggccggaccaacactcagggtctttaaat aactgacaagaaagtgctgcctttctaattacatcagcaaatggttagactttcaagtcttctcggatagggactataaa ccgtaggtcacgtctcgtaaatactttccatgtttataagttcaatgtgggatgttaagaacccacacactattcaaaaa gagtaggacatgaagttcctggtgttgtggctgccctttgcgagaggttgggttgggtggatgaggtcaatatggactga tagcggcagcctggagcgcctttacatgctgatgtccgacctcataccacaaagtctgaaataacattgtaaagtggaca cgtctgttgtccactcaccttgcagagacgtattgccagaggaccagctcaactgcctttcaatatcacatttgcattga tgcttggtttgcctatagagactttttgcccagctaattcatcatttattagatatattacgaattaggggttagagtga agttcgtacaatagcacaagagcggtaaaaatattttattacattacagtaactttgctactagaatgtgttttttatga aattattgacgcagttacaccctagtgaccattaaaccagaaatctgtgaatgtaatggcctgaaacaaaacttcttatt atttttagattattccctttgctttactgagttttcttcttcttttttttttacttattcacaggttctctatacgttat gggaggtcaagtcgcagcgctgaaaatttacatgaaactcttttagggaaaaacctcaatgatgctaaatcacattctgt tgaaatcctccatgataaagatgtcacaaccatttaccttgacaaaacatctgatcaagaaaaagctgaacacagtttca aaaccaaatatacaaaactagacattgatgtagccatgtatgttggcggtgcagctgatttcaaagctcttctctctgtt aaatcaaattctctttttatgggctgcatctttcaggcagaattcaagaaaatattgccaggcccagaaaaggtgataga ctttctgaaggacgataatgtcaccacttatccaagtgctatgaacaagaaatgcgtggcacaaacttacgagccattta cgtttagttcagatgattcaggctttgtctgtccagtccaaggcttgtcttcatcacgttcactaaatggaagtttcatg ttccgtacgtacaagactaatggggttcttctcaaacaagtcaatggtggcaatggatttgaattatcatacatggagaa ggaggttaaattgaaagttatcattcgtgaaaccctaccaaacatcaattatcaaaatgtgttgacgaaaataaacaatg aaaattggcactacgttaagttcagcatctcaccaatatcttttgagctgtcagtgggttccaagacagaaactcatact cctgctgcgacacttccaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnaaatcagaaatcctttttaatactacgtagttacccgactttttttattactatagcgctatatccctctcttttgga agagagttatgtgcacatgcactcacatccacgtgcgctactattacaacctaatcatataccctaaaatactggcaaga taacccttacaagaatgtagaaaatgcagttaagagatagtgcagccaaacctctcttgaagacccagtaatgacaagta tttagctatgtgcaatgcggacattttcttgatggtgaaaagtcggagttatatagttttgctcaaaaattcatccctgt caggtttgttactcttcttttatcttgaggaaagataccttggtagagatttgttatcaaacaaacattctactcatctt ttgtgaaaattaatttgcatatttgccgttgtcatcagcataagagtggttttgtttcagttagctgagtatgcctttgt tggtccttttgtgttaaacnnnnnnnnnnnnnnnnnnnnnnnnnncagttacaccattcaattttatcagttttgtttag caagatgattcttttttcatgtgtagttttgggtaaaataaagaacaatggttcataaaataatgctttggcattcagtt actataacgtttcttttttgttaaattctattccttgctagctgagtctgagtctacctgtgatagtctgaagaaaaaca actcaagtcttagtcttagtgaccataagtatgcactagattttgatgactctggtccaatcaagacatactgggctttt tgcaacttttctgttgaccctccaaccacaagagtggagtctagagacttcaagatcaagctaactccaagtaaccaacc catctcacagcgaatatcttatgtaccaagcttagatgctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcttttagctaaacccgtt cccacccttgagaaaagaaattacataatttttactgttgcttttccttttttaaccccggtagaggcaactgagcagat agacaaaccgtactgctattaacattcatgttctttactctgtaagagaagtgacttgtaagtctttttgccaccaaagc taaattgaaagcagtccaaatccattgctgttataaattagactaattccttataacgtttattctttttctttcctgtt tgtttactgttttgtcactggtagcaaatattttctacatcgtttacagtgttacgtcattactcttgactttcagcgat cagcaatagacctctttcacaatggcggtcaaatttagtattcttttgttttgatgctaataagccttattagcctcgct gttattggcacaatcaataagataaatacgaaagggtaatcatatgtgccgccatttatgaaattggtccatgttttttc ttagatggttcgcaaattgagtttgactcaaggtgcaaaacctctccttggtgtgagcacctgtcaaacttacaggtgat gtgaaacaaagaaaagagacgagccaagggatcattatatataaacaataaccgaaacccaacacaagctaattaagaaa caaagaaaacatatcacaggttcttacgtggaggtaaagcccgcgttgaagtgtttaaaggcccaccttcatgcaagagt ttatgcggtcgtttgcttttattttgaatctctctattgtctaaacgcgttgctgattggctgaacgcactcaagctgtt cgaaaagggcaccatctcgtcttgtactcgtcagcttcaaacgattaattttgcaaatgtacaccgaatatatacaaaat aacacaggaaaactatagaatgataaacagggaacgtatttacacaggcggattaaaatatatgtgcaggatccgattgt aatgaaaaaagacgataacagatctttgaagttttttaaagtttcttgtcacacaaaattcagatttgccgagcgcgacg cgcattgtattttgggtgaatgtgggcctttaagatgttgtttgttttcttctcctgccgttatggttttcaggcgaaat cagcaactctgcgacatttgtaaatgaagatggctttatcaaactcaagaagtggtctccaccatcaaatggggtaatct cacttttcttcaagacaccctataagaaaggagtattgctgtacaatggcatgcttgagaaagatttctttcaagttgaa atcatcaatgaaacttcagttggtctctcgtacaacattggcaatggtgtaaggaaaattgaacttagtttgggagaaaa tcatgtgaatgaccgctcctggcaccatgttatgatatatcataacatgaaagtcttcggattcagacttgataatcaag agggcaagcataaaaatccattgttttttaagagagagttgaacctggataatgaactttatgttggtggttacccatat gatgtgtctaaaggatttgtgggctgtattcgtggactggtaagtttttttaaggaccacttttgtctgtgccataaaaa cattttttgtaatcctacattgtaagtgtgtacagaaaaggagggaggaaattgatattgtgctctgaattgagcactcc cccctcggggctcttgagggccaaaagacgcttttagcatcacgtttacggcaaacggcgaacctggggaggtcacgtga ccaccgttttttgctgtcacctttgccgtttgcggttccggtttcgacgggaagaaggcgctcgagcgttaagtgactaa cgggaaagtttcttagccgctaaacgaaaccaacttacgtttgacactttttgtaagaattttcaaccttttatggtttt gcgattaaaaagcaatatattttccatgatctaaaacgaagaaaaccgagtggcgaaagaagttgaaaacaaaacggcgg ctcgaagttcgtaatcatgtgcatgcaaagaagctcagttatggagttctgtatcaattcttctatttctattaccttct tctatttctagaaaatgcctttcttcgcatgcacatatgctgtgaagaagccgccagtttggattttacccagaattcat cttttcccgccaaaaaacgtcaacgccatgctaaagtcaatagggagcttaagaaacgacgacggcgacgccaacaacaa cgccacaaaacaatgatatcgttggttaattacaggttaacgcactcgg |
Protein
Protein ID | aug_v2a.15580.t1 |
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Definition | - |
>aug_v2a.15580.t1 TSEEPFYCFLSGGASVASRQFTGEGYMEYRTTSGNIINSVKDELRIEFSTVQPSGLLFYARNSGGQFADYVALELVGGRL RFSIRYGRSSRSAENLHETLLGKNLNDAKSHSVEILHDKDVTTIYLDKTSDQEKAEHSFKTKYTKLDIDVAMYVGGAADF KALLSVKSNSLFMGCIFQAEFKKILPGPEKVIDFLKDDNVTTYPSAMNKKCVAQTYEPFTFSSDDSGFVCPVQGLSSSRS LNGSFMFRTYKTNGVLLKQVNGGNGFELSYMEKEMVRKLSLTQGEISNSATFVNEDGFIKLKKWSPPSNGVISLFFKTPY KKGVLLYNGMLEKDFFQVEIINETSVGLSYNIGNGVRKIELSLGENHVNDRSWHHVMIYHNMKVFGFRLDNQEGKHKNPL FFKRELNLDNELYVGGYPYDVSKGFVGCIRGLKMPFFACTYAVKKPPVWILPRIHLFPPKNVNAMLKSIGSLRNDDGDAN NNATKQ* |