Gene
Gene Model ID | aug_v2a.15907 |
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Locus | scaf7152 : 52091 ... 55105 : - |
To GenomeBrowser | scaf7152:52091..55105 |
Genes list of scaffold | scaf7152 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-clock3 |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analysis (NJ and ML). Adi-clock1 and Adi-clock3 are aligned tandemly in the genome. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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neuronal pas domain-containing protein 2 | GO:0003677 GO:0005515 GO:0007623 GO:0044424 GO:0044710 GO:0044763 GO:0045893 GO:2001020 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.15907.t1 | gi|221040198|dbj|BAH11862.1| | unnamed protein product [Homo sapiens] | 0.0 |
aug_v2a.15907.t1 | gi|488564237|ref|XP_004471812.1| | PREDICTED: neuronal PAS domain-containing protein 2 isoform X1 [Dasypus novemcinctus] | 0.0 |
aug_v2a.15907.t1 | gi|556777635|ref|XP_005983905.1| | PREDICTED: neuronal PAS domain-containing protein 2 [Pantholops hodgsonii] | 0.0 |
aug_v2a.15907.t1 | gi|532034231|ref|XP_005360020.1| | PREDICTED: neuronal PAS domain-containing protein 2 [Microtus ochrogaster] | 0.0 |
Transcript
Transcript ID | aug_v2a.15907.t1 |
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Definition | - |
>aug_v2a.15907.t1 gattccgcaatctggtgcatgtgggaatggctaccatggcgaacagtgagacagccggtgcttcaaacgaagatgaagcc aaaaaagcttgcttgctcagaaaccgaaacgaaaagaaaagaagagataggttcaataatttagttaatgaactttcagc ttctttgccgcttgaagggaagagacttagcaaaaacaacgttttgaaatttgccatagagcacttccggcaaaaccaac ttgtcgccaactctgaaaatgcccgcggagaaaaggtgttcggaaaatggcagccggattttcttacaaacgaggaattt cgtcaaaccatgctggacggattgggaggtattgttctggcagtagaggaatacggcaagatcatttacgtctcgagtaa tgtgttttcatgtcttggctacgatgaagatgacatcttgaaaactaacatattagattatgtgcacatggatgaccgaa gaacaatctattcactcttgggaactatttatgataactgggtcgcctcaaatccagtgggaattaatcgctttactctg cgtgttcgatgcggtccgctgaatcgaggtagttgcggcgagtttgcaactcttcgttgcgtaagcaggatttctacagc agacaacatgctttccactagtgatcagagagacccttgtgttgttttacttggaaaaactgtaattttccctagagtca atagctctgtgttaatttctgacaccaagagggcttcaaaattcacttcaaggtttgataaggagtggaagtttgaatgt gtggaaagaagtgctactttaaccctagggtactaccccatcgagttactggggacatgcctatatgaatactgtcatgc cgatgatttagccaatctttcagagtaccacaacatgttactttactctggggtgatcactacatgttgcttccgcatgc tgacaaagggacaagtttggatctgggtgcgaagccgttgccatgtgtcatacagccaattagatgctaagcctgagtct attataagcataacatggccaataaaaagcacagactttactgctaaccaagaggaaacgatcaatagggatcggaaact tttttctcagatgctcgaaaagcatggtgggaaacagttcccttccactactttcgtttatggtacacaaggtaatgaag caagtgacgcatcaagattattatcatcacaatgtatgacatcatcatcgtttccttcatgttcatcagaatcacacttc acacctgcacaaggctcttctcttgtgtcgattaacaataattccaacggctcacaaccagtaccaagttacagttctgt tattgtaccatattcagagtccacccttgcaggaatgggggcatatatggacactgcagcagttctagctcaatctaatg atctatccctgccaaatgatcctttgaccagctctgtggagggtttagatgagaattctttgctattagaagagcaaatt gagatgccagagtccctttcattttcacaatgggctcatcacttgcatcttagagaacagtacaaaagcctcacagagtc aattagacaacaatctgagcaggtaacaaccattcgcaagcagctctcaattcaaaaagaattgtcagagctaagtgacg aacttgagatgcaggaaaggctgaaacgacagaatctcagaaatacttttgatgaaacaagagctattattcagcaaaag atgaaggagttgcaagaaatccatgcccaacatattgtaggaccaacatagtttcatttctgttggttcatttttgttgc aaaatgaacagtggaagaaaggtgttaacttccctgttgctatctttgttgaccagagtattaatattgttataagccta aactggaaatgtttctcttaacttaaaaattcagttcttttgatatctgagatcacttattcttatgtgtccctgatctc ttgaatgatgatgagagtttttgtgggcagcaaagtcattggactccaagctaaaatggtagacaacatgttttacattc aacagaaattctcaagttttggcaaatttcacattgttcttatgattaagagagagggacaatactgagaagggaattca gatattatgacagtcaccctatgatgtctgtcagtttattatatggctatgtcccaaaaggactggaaacatccaaattc aataatttgataagctaggacagtgatctggattctttggcctggacaaataatatcatagacttgtatggagtgagttc tttcttactttttttaagggaaannnnnnnnnnnnnnnnnnnnnnnngagaaaattgtcttagtcacaatactgagtgga agaacaaatagacttagaggaaagaaaagggaatgacaaagtattggaaagacaaacacaaacatgacttatacatttta aaattgaaagagtgaaacacaacttgatttcttgtttggccatataataaacatctggactaaatcagtccacataacag aatctcaaccttggtcactgatagaaactgaatatgctggtgaccttcataaagattctcctgtacagacctcccctcaa ggttattaaaaagtatcgttattacattcattttagttcagttataaaagaaagagaaaaactacaacattgttaagaag gtactcattttattgagcatacttcactccctaacaatgcaatagatttcatcccctgctggtgaaaaggcatgattaac tgaagtatcagcagctgattggcaatcttaaacacgtaaaattatcgtaatttttaacatgccgagttaaggtttttctc agtggtggaaatccccataaagcattccagtttgtatgataaattagacaataatggcaaacagccatcagaaaattttt tatcagcttaaaagtgaaaattactttgcaaattcattaaaggtgctttgtatct |
Protein
Protein ID | aug_v2a.15907.t1 |
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Definition | - |
>aug_v2a.15907.t1 MATMANSETAGASNEDEAKKACLLRNRNEKKRRDRFNNLVNELSASLPLEGKRLSKNNVLKFAIEHFRQNQLVANSENAR GEKVFGKWQPDFLTNEEFRQTMLDGLGGIVLAVEEYGKIIYVSSNVFSCLGYDEDDILKTNILDYVHMDDRRTIYSLLGT IYDNWVASNPVGINRFTLRVRCGPLNRGSCGEFATLRCVSRISTADNMLSTSDQRDPCVVLLGKTVIFPRVNSSVLISDT KRASKFTSRFDKEWKFECVERSATLTLGYYPIELLGTCLYEYCHADDLANLSEYHNMLLYSGVITTCCFRMLTKGQVWIW VRSRCHVSYSQLDAKPESIISITWPIKSTDFTANQEETINRDRKLFSQMLEKHGGKQFPSTTFVYGTQGNEASDASRLLS SQCMTSSSFPSCSSESHFTPAQGSSLVSINNNSNGSQPVPSYSSVIVPYSESTLAGMGAYMDTAAVLAQSNDLSLPNDPL TSSVEGLDENSLLLEEQIEMPESLSFSQWAHHLHLREQYKSLTESIRQQSEQVTTIRKQLSIQKELSELSDELEMQERLK RQNLRNTFDETRAIIQQKMKELQEIHAQHIVGPT* |