Gene
Gene Model ID | aug_v2a.16702 |
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Locus | scaf7945 : 15926 ... 23967 : + |
To GenomeBrowser | scaf7945:15926..23967 |
Genes list of scaffold | scaf7945 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 118 |
Description | This gene model contains RVT_1, Peptidase_A17 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.16702.t1 |
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Definition | - |
>aug_v2a.16702.t1 accaaaacaatattcaaagcgaaaggtaacggtcccttgataattagtgaggggcatcaatcccctgcattaattccagt gacgctttgcgacatagctttgagtattttgttgcttgatagaatttttttttgatctaccactcgaagtgccacggaaa acccaaaaaaaatggagaaaagacccagagaaaaaggtacttgtaatgctttgttgtgactgatacgtttaaacaaacca aaggcaaaactgcatgaggccttatttactactctcttttccatgaatttcatttcaggagtccgagaaaggaagtgaac aaaagttcaacgtttgtgtttagggagcagagatggtgcagtggtgagtgccctagcctcccaccaatgtcaccctgtgt tcaattcttggcctcagcgttatcattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagcccgataatggtcgaagaagagttgaaagaagcgaagaagatccgg aggaacgcaaaagcagccctcacaagaagtggtaattcgttgaataacgtaattgaagttaaaagacccaggatcagagg taagagatgccttaaataaagtcgagaaagcgtacgatgagctggtagtcaagcatgaagactacacgaaactcatagat gatgatacgaagtttgaagaagctgaaaattggatggaagaatgtcagggctccctcatgaactatgtaatgcgagctaa gatgtatcttgaaagcctagttagccaagaaaatcaaaatttggaaagtaatgctgctactgaaaaaatcacaagtaatg agtcaatccacatcggaatttcaagtatgcaatctggaatggatgtagtttccggccccacctctcatggtaatgaacag atccctattgttaatgctggacagaacaactcaacaccacccctaaataatgaaaataaaaatgtgaatgaaaatgtaca agttccaaatctcattagtggtcccagtacttcaagtaacgtctgtcgttttacgatggagaagccaaaattgccaaagt tcgctggagacgtgagagagtacgcaatttttaaagcagactttaaacacacaattgaggcctgatacaccaaacgagat tcgatcacgtttttacgcaggtgccttcacgaaaagccactagatttaattaaagggattggcaccgactacgactccgc ttgggaatatttggattcaatttatggtgatccgcgcttcgtttcagacacgataacgcaagatatcgttaagttccgca cactgcaggacggagaagatgcaagattctgtgttttggcacatttagttaggcgctgttttaacactcttaaggaagtg ggcgttcccagcgatatggataatagccatatgttgtccattattgaacaaaaaaatgtgcgctgacgatcgaaaagtgt ggtctagagaactggaacgagacggaaagaaggcgacgttacaaggactcatagattggatgacagtaaagatgacgtca cgcatgcgtgcaacagcgccactaagaaccggttcaagcactcgttcagtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttagaggaaaggaactcactctggttggagatata tcgaagatataccatcgcatcttaatacccaaaccagatcagcatgttaaccgtttcttatggagaaacctcgaaacctc ccgcgaaccagatgtgtatgtgaaaactgtactcagcttcggtgataaaccggctccagggatggctcagattgcactta ggaaaactgcagaagaaagcaagatcacccatcctaaggcagccgaagtcataacgaagaacgcttatatggatgatatt tgcgattctgttgacacagtaatggaagctaaacagcaaaccgaggatatagaaaccgtttgggagaaaggtggcttcaa agtcaaaggttggatctccaacaagcccttaggaagcccaagtccgaatgagaagaaggaaatggcaacgatgtttcaag gatcagttgaagagaatgttctgggcattacatggaacaatcagtctgatacgttatcgttcaaggtgaactttgaactc ataaaccgaatcatagaagctgaacagcgaaaacccgagattaagttaactaagagattgttactgagtcagatcgctcg gatctacgatcccgttggattcgccgccgcattccttataagggccaagattggaatgcaagctctttggcaaactggag ttgactgggacaaggaacccccgcctgcgatccgttacaagcggatcgaactgttcaaagagatgaaagagcttagcaag ataacctctcagagaagtttgtgctgtgcggatgcaactgaacccccagtgctgtgcgtattctccgatgcgtcacaaga tgcctttggagcttgtgcgtacatcctccagggaataaatggtgacaagtaccaggtcagattgattgcagcgaagtcac gagtcgcacccttgaagcaattaagcgtacggcggttggagctacaggctgcagtcctcgtttcccgtctagccaagact atagtgcaggagtccaggctacaattcaaatccgtgaagctcttcactgatagttccataacgcttgcttggctacaaaa cccttcacgaaatttgaagccatttgtgtcctcacgcgtaggagaaatccagagcaacaccagtggagacactggtgaag tgaatgtggccgatgatgtttcaagaggaatacgattggaggagttgaacggacgatggagcaatggacctgagttctta cagctacccgaggaattctggccccaagaagcaataaaagctgtctcagaggaagagatggaacgtcgtcaagtgaaagt aatctgtgaagttaagaaagtggaacaagccatcaaccccgaaaaatattctagctggagaaaattgatacgggtaacag cacgtatacaaaggctagccaagaagataagttcacgaaagcacgctcaggaaggaagaaacggtccactaactcctgaa gaactagagagagcagagattttctggattaaagcagctcaaaacgatttgcatcgtcgaaaggaaaagggagagttcaa atcactgagcccgttcctggatggtaaaggtgtacttagagttggaggaagaatggatgaggctatcgtctcctatgatg caaaacaccctgcccttcttcaaagtaatcactggatctccttgttaataacaagacatgcccaccagcacggccataac ggggtagcagctacgaccgccagaacaagaaggaagttctggattctgaaaggaaataaactgagcaaggcagtaaagtt caaatgcggattttgccgagaaatggcacagaagacggagactcaattaatggcaaatctacccgcccttcgcctagctc cgtataccccaccgttctacatgaccgctttcgactatttcaggccttacaacgtcaagatctctagaaacaaaaccgca aagcattacggagtcttgttcacatgcctgaacacaagagctgtccatttggaaatggcagtggacctttgaacgatgga gtttcttcaagtcctgagaagattcttagccatacgaggtcgaccagcagtcttactgagtgacaatggctctcagtttg tcggtgccgagaaagaactgcgtcagatggtaggcgacataaacgaagacgaagttaaagagttctgtggagagaagggt gccccgcatcaaaatggttgtgcagaagcactagttaaggcctctgaacactgcactcaaacgctctgagtatccaatac caactgttgatcaactgcttacagaaattaacaatgccaaagtgtttaccctggctgatatcaagtctgcnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnccagtatgcctcaagagcccttactgaaaccgagaaaccctacagccagatagagaaagagatgctcagtgtggt ctttggtcttacaaagttccatacctatacatatggtagaaaagtaacagtgtataatgaccacaaaccactggctgcgt tactcaagcgacccgttggggagaatcccattcgacttcagaaatgctgtgccgcattatgggatatgattttgacttca agtacatcaaaggcaaagacctgctaattgccttgcccttagtagatcccacacgactaatcacactcgcagccagagcg aagaagagattgaaaccatcggcttggttattcaagatcaaagtgtgacaagccacctcaaagaaattgcagaggaaact gccaaggacaatgtcctacagtcggtaatccgcctcatctctgaaaattggtctatcagtaaaagacgtattccaaccga agtctttccattctggagttgcaaagatcaactatcattcaatgatggcatcatctacagaggtgatcgtattgtagtgc cagttacactgagaaagagcctaactgaaaagttacatcaagctcacatgggtgttgagtcaactttaagacgagctcgt acatctctttggtggcccggtatgaactctcagctgaaacagttcatatcttcatgtcaagtttgtcaatccttccagag aaacaacccgaaagaaaccttgatgagtcattgtattcctgatagaccctggtctaaaatcgcagccgacccttttgagt ttaaaggagaacactatctagtattggtcgactattacagcgattggatcgaatttgataagatgagagaccaaactgca gccgaaacgattgccctgctactcaaacagttctcacgatggggacttcccggtgagattgtcactgactatggaaagaa ttttgactctaaggaattctcacaattttgtcagcggaagcagataaaacacacaaaatcctcacctcaccatcatcaga gtaatggcaaagtggaatcggctgtgaagatcgccaaatctatcttgagaaagactgaaaactctgctttaaatccttac gaagccctacttgatcaacataacacacctacagttgatatgacgacatcacctgctcaaagatttctacaccgaagact gaaatctgagattcctatgaaagccactctacttacaccggaaattgctgaaacagttctgaaagaaaaaactaagaaga caaccaagtctcaactgtattacaatagaactgccaaagatctgagtgttctaaaacctggtgatcccgttaccatcaag cctgaaggactcaccaaaggacaacaatggacaaaaaggacttattgttcagaggcatccatttcgtgcatacgatgttg aagtggacggcaaactcctcagaagaaaccgtgtacacctaa |
Protein
Protein ID | aug_v2a.16702.t1 |
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Definition | - |
>aug_v2a.16702.t1 MEECQGSLMNYVMRAKMYLESLVSQENQNLESNAATEKITSNESIHIGISSMQSGMDVVSGPTSHGNEQIPIVNAGQNNS TPPLNNENKNVNENVQVPNLISGPSTSSNVCRFTMEKPKLPKFAGDVREGKELTLVGDISKIYHRILIPKPDQHVNRFLW RNLETSREPDVYVKTVLSFGDKPAPGMAQIALRKTAEESKITHPKAAEVITKNAYMDDICDSVDTVMEAKQQTEDIETVW EKGGFKVKGWISNKPLGSPSPNEKKEMATMFQGSVEENVLGITWNNQSDTLSFKVNFELINRIIEAEQRKPEIKLTKRLL LSQIARIYDPVGFAAAFLIRAKIGMQALWQTGVDWDKEPPPAIRYKRIELFKEMKELSKITSQRSLCCADATEPPVLCVF SDASQDAFGACAYILQGINGDKYQVRLIAAKSRVAPLKQLSVRRLELQAAVLVSRLAKTIVQESRLQFKSVKLFTDSSIT LAWLQNPSRNLKPFVSSRVGEIQSNTSGDTGEVNVADDVSRGIRLEELNGRWSNGPEFLQLPEEFWPQEAIKAVSEEEME RRQVKVICEVKKVEQAINPEKYSSWRKLIRVTARIQRLAKKISSRKHAQEGRNGPLTPEELERAEIFWIKAAQNDLHRRK EKGEFKSLSPFLDGKGVLRVGGRMDEAIVSYDAKHPALLQSNHWISLLITRHAHQHGHNGVAATTARTRRKFWILKGNKL SKAVKFKCGFCREMAQKTETQLMANLPALRLAPRSHTTNHTRSQSEEEIETIGLVIQDQSVTSHLKEIAEETAKDNVLQS VIRLISENWSISKRRIPTEVFPFWSCKDQLSFNDGIIYRGDRIVVPVTLRKSLTEKLHQAHMGVESTLRRARTSLWWPGM NSQLKQFISSCQVCQSFQRNNPKETLMSHCIPDRPWSKIAADPFEFKGEHYLVLVDYYSDWIEFDKMRDQTAAETIALLL KQFSRWGLPGEIVTDYGKNFDSKEFSQFCQRKQIKHTKSSPHHHQSNGKVESAVKIAKSILRKTENSALNPYEALLDQHN TPTVDMTTSPAQRFLHRRLKSEIPMKATLLTPEIAETVLKEKTKKTTKSQLYYNRTAKDLSVLKPGDPVTIKPEGLTKGQ QWTKRTYCSEASISCIRC* |