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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.17342
Locus scaf8676 : 19607 ... 21705 : -
To GenomeBrowser scaf8676:19607..21705
Genes list of scaffold scaf8676

Manual annotation
Study fieldCell Cycle
Gene nameAdi-cyclin N terminal domain containing protein
DescriptionNamed thus because this protein shows similarity with Homo sapiens cyclin N terminal domain containing protein by the BLASTP search.
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.17342.t1 gi|260819120|ref|XP_002604885.1| hypothetical protein BRAFLDRAFT_217110 [Branchiostoma floridae] 0.0
aug_v2a.17342.t1 gi|585669653|ref|XP_002735714.2| PREDICTED: cyclin N-terminal domain-containing protein 1-like [Saccoglossus kowalevskii] 0.0
aug_v2a.17342.t1 gi|524868213|ref|XP_005090911.1| PREDICTED: cyclin N-terminal domain-containing protein 1-like [Aplysia californica] 0.0
aug_v2a.17342.t1 gi|558174542|ref|XP_006125836.1| PREDICTED: cyclin N-terminal domain-containing protein 1 [Pelodiscus sinensis] 0.0
aug_v2a.17342.t1 gi|632986179|ref|XP_007910090.1| PREDICTED: cyclin N-terminal domain-containing protein 1 [Callorhinchus milii] 0.0

Transcript
Transcript IDaug_v2a.17342.t1
Definition-
>aug_v2a.17342.t1
gtataaaagtagaatttttggcaccccaccagagcctgtcttcaacatgaagtcagcttgtatgcctccagagttattgg
aggagtcgctttatgttctagctgatataaatgaaaaaaacatggatgatgctagtagaatacagggatttttcaaagga
gggaaaacagcaggtaaaaatgttaaaaacgattcttaaccacctgagcactgctttcaactaacctaagttatgtttcc
tagcgtatgtttttcttttatgcgaggacatgggtttaccatcacagacacgctttttggcaattgaaatttttgatagg
taggtcaaactatattaaagtgttggctggctatctcatttgttgcttaactctcactcttacgaggaaaggtgaggcat
ttgaaattttcaacaggttcatgtcaaaacacgtctgtggcctctatgaactaattcgttcaaattcagaaacaaaccag
caaaaaaactggaaagaagtggaaaacagagttaaaacacagttgcccctcagagtgatgtcttgtgtgcagcttgcaag
caagctaacttcacattataaggttagaaactgaaaggaacaacaataatgcgaataacttgctgacagagacaaattaa
gcacagcatcatcagtttgtcaacggtataacatactactacgttgacaaataagtgaaggatgagagcaaatgtacaag
taaatgaaaggatggacaagtggatgacataatggctgaaagtaaacaagacggatggatggacatgagtaacaaacaat
acagagattgatgaatcaatagagtggtttaaagacttaaggacaactatctaaattattaacatagaatatggaagttg
tttttctgaggattagttgatgtcaacccaggaatattgaaagaaaattgaagcaagcttaaactgattctcaaacttta
ctctactgtattttttaggtggttacagcaagtaaaggccagaggtttctcaactccattggtcactgctactccttggg
aagtatagtgaagtcagaattaagaatcctcacggaattagactatcatattctcgtaacaacaccactgacatttcttg
aaacagtcctggagatattgggtaaatgaaaaaacaaagtgccaaatcttaactcaactaaagtaaaaggttttcaaaag
catcaatctcccttcacttttgtgtgtaaaactatttgcattaacatggctgttcatttgcttttcatttttccactaag
gacacaatgactcccgctcgcaggttaaacttcttcatgaagccagtgtaaaacttctcgacatagtttacctgaagttt
gaagaaatctacagcaagctgtgcatggctgccacaggagagaattgcattagtgacagacaaaagctctctgtgttagc
aaatgacctcatgttgctcgctgtatcaattattggagctgcatcctacattgtaaaccaggccacaagtgatatggttt
gttttggttatgaatttcttcctgcattctaactttaacctagttgttcttaataactccttcccacaaatactggtagc
ttcttaaatatagggtacctctcagctatgggagaggcattatagaacataaagatactacataaagagctatatccacc
ctgtgttgataggccactttaaaaaaacactattggaggacaaacaaacaagattatggtatttttaaaagtggcctatg
gaatgtattattctagccaaaataactgatgatacaggatagtgatcagaaataactgtcagtagcaaagcagaggtcaa
taatgaaaatatcatgaacaggttgcaataagaaaagtttgcccttttgtcacaaaaattatcccacaccactttgatta
acagaagacccacttgtgccttccacatgaagtctttctttatcttttgtaggttgtggagcaacttgggagaatcacac
aaattccagttgatgatatactagattttgccacaattattatagaacatacattgtaaatactgtgacaccttgaactt
tccactccagtcagacagc

Protein
Protein IDaug_v2a.17342.t1
Definition-
>aug_v2a.17342.t1
MKSACMPPELLEESLYVLADINEKNMDDASRIQGFFKGGKTAAYVFLLCEDMGLPSQTRFLAIEIFDRFMSKHVCGLYEL
IRSNSETNQQKNWKEVENRVKTQLPLRVMSCVQLASKLTSHYKVVTASKGQRFLNSIGHCYSLGSIVKSELRILTELDYH
ILVTTPLTFLETVLEILGHNDSRSQVKLLHEASVKLLDIVYLKFEEIYSKLCMAATGENCISDRQKLSVLANDLMLLAVS
IIGAASYIVNQATSDMVVEQLGRITQIPVDDILDFATIIIEHTL*

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