Gene
Gene Model ID | aug_v2a.17612 |
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Locus | scaf9026 : 9586 ... 12364 : + |
To GenomeBrowser | scaf9026:9586..12364 |
Genes list of scaffold | scaf9026 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 105 |
Description | This gene model contains DUF1758, RVT_1 and Peptidase_A17 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.17612.t1 | gi|291229887|ref|XP_002734902.1| | PREDICTED: uncharacterized protein LOC100368328 [Saccoglossus kowalevskii] | 0.0 |
Transcript
Transcript ID | aug_v2a.17612.t1 |
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Definition | - |
>aug_v2a.17612.t1 cacgtgagtctcatcgagattcaagcaaaaagcatgaaaaacaagaagagccagaaagcaacaaaattgtcacctccaca atgacaaccttgacaactacaacgtcacatacgaatacactaatgccaactgcactggtcacagcaggcggaccagctac gagatgccaagcgcacatccttatcgataccggatcacaaaagacattcatcacacaacgtctgaagaataagctgcagt tgaaagctgttcagaacgaaacactagacgtaaccacatttggttcaactagaggtactccgagatcctacgaagtcgta acacttaccttaaacgcggtaaataaagatgtcaaaataacagccttggtcacacccatcatctgcccaccactctcaag cacccaacatacggaaattcctgttgaattcaaagctctcgctttcgccgatccactagacgcggaaggtgatcgcacaa tagatatactcatagggaacgaccactacgcccggatcattgtgggaaacacaaagaaatcacaagatgagagatggatg gccacacaaagcaagtttggatggcttctttcaggaccggtatccaacaacgaatccagtacggaaactacactcagcac attatgtcaattggttggtgcacagcccacgaacgaacacctcaacgaaactctcactaagttctgggaaataaatagac tcccagacgaatacaacgcccctgaggtaacagacgtccagaaacattttcaagacaccattgaattcaacaaagttact ggcagatataatgtaagactcccatggaaggacaacaagcaaaacctaccaacaaacttcacattgacgagaaaaagact gagcaacctgcagcaaaccctaaaaggaaaacatccagagcttatttacaaatacaacgagcaactgatcgatcaactca agagaggattcatagaacaagtcctcgacccgaacatacatgaaggagtcatacactacataccccattttccagtcttc aaggaaagcagcacaaccgctatgagaatcgtatacgacgcttcaacaaaaatatcatcgaaggcattaagcctcaacga ttgtcttcatatagggcctaacctcatgcaaagagtacaaaatatgctactcaccttcagatcacacaaaatagccttca cggcagatatcgaaaaggcgttcctacaaatagagctcaacactcaagacagggatgctacgagattcctttggctcaaa gatgtggccaaatcagcgaataatccagacaatttagtcgtctacagattctctcgagtacttttcggagccgcgccgtc tccatacttactgaatgccacaatacaacatcacctcatcaagcaaaacgactggatatcagaagacttacaacgttcga tttacatggacaacgtccttacgggaacgaacactatagctgaagccttagagtattacacatcatcaagaaactgcttc caaaaggcgggtatgaatttacgacaatggaccagcaattcccctactttaaaccgccaagctcatgttgacggcataca cgcagaaccaatggtcaaagtactaggactcaactggaacacaaagacagatactctgtcactatcattaacaaaactta tccaggaaaccaacagcatagacaaaatctccaaaagatcagtattaagcttatcttcaaaactatacgacccaatggga tttgtggaaccagtgacagtaaaagcgaaaataatggtgcaggaactatggaaacacaacttaacatgggacaaagaact tcctgatagctttaaggagaactgggtcagatggctgaatgaactccaagatctgaccccactagaaatacccaggcaat acttcaataatgttggcagtgaagttcaactacacgtgttttgtgacagtagccaactagcatacggagcggtggcctat ttgagaggaaccagccccaaaggtgggacaaaatgcacattcgtaatgtccaaaagcaaagtagcacccataaaaccaca aacaatgccacgattggaactacttgcagcagtgctcggagcagaattatctaaatacctgtcaaataccatacttccaa agttctactcatgtcaaattatattgtggagtgactcacaaattgtgttatcatggatatcttcatcaaagcctctacgg caacagtttcttcaacatcgagtacaactgattagagacatcacctcccagaatacgtggaagtactgcccgaccacatc caatcctgcagacctgattaccaggggaatgaacgctaaagcttttatatctaaactgcagtattggaaccaagggcctc catggcttatgaagccaacacaggaatggccatcaatcactgaaaaccctgttaccagacagcacagaaaattacacaga gaaccaatcaataagcgttaatctcccaaccccacaaaagagcacaaatttattcaacgccatcgatattaacaaataca gtaccttcaacaagacactacgagttaccgcgcttgtcatccatttcaccgcaaaattgagaaagaaaacgaagtctaat acagttactgccatagacatgaaacacgctcgcatcgttctactccaatctgtacaacaattctactttggagacatcct atcacaaatcaaagacaaagctaaaggtaaacggccagcaataatacaccagcttggcc |
Protein
Protein ID | aug_v2a.17612.t1 |
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Definition | - |
>aug_v2a.17612.t1 MPTALVTAGGPATRCQAHILIDTGSQKTFITQRLKNKLQLKAVQNETLDVTTFGSTRGTPRSYEVVTLTLNAVNKDVKIT ALVTPIICPPLSSTQHTEIPVEFKALAFADPLDAEGDRTIDILIGNDHYARIIVGNTKKSQDERWMATQSKFGWLLSGPV SNNESSTETTLSTLCQLVGAQPTNEHLNETLTKFWEINRLPDEYNAPEVTDVQKHFQDTIEFNKVTGRYNVRLPWKDNKQ NLPTNFTLTRKRLSNLQQTLKGKHPELIYKYNEQLIDQLKRGFIEQVLDPNIHEGVIHYIPHFPVFKESSTTAMRIVYDA STKISSKALSLNDCLHIGPNLMQRVQNMLLTFRSHKIAFTADIEKAFLQIELNTQDRDATRFLWLKDVAKSANNPDNLVV YRFSRVLFGAAPSPYLLNATIQHHLIKQNDWISEDLQRSIYMDNVLTGTNTIAEALEYYTSSRNCFQKAGMNLRQWTSNS PTLNRQAHVDGIHAEPMVKVLGLNWNTKTDTLSLSLTKLIQETNSIDKISKRSVLSLSSKLYDPMGFVEPVTVKAKIMVQ ELWKHNLTWDKELPDSFKENWVRWLNELQDLTPLEIPRQYFNNVGSEVQLHVFCDSSQLAYGAVAYLRGTSPKGGTKCTF VMSKSKVAPIKPQTMPRLELLAAVLGAELSKYLSNTILPKFYSCQIILWSDSQIVLSWISSSKPLRQQFLQHRVQLIRDI TSQNTWKYCPTTSNPADLITRGMNAKAFISKLQYWNQGPPWLMKPTQEWPSITENPVTRQHRKLHREPINKR* |