Gene
| Gene Model ID | aug_v2a.17623 |
|---|---|
| Locus | scaf9045 : 27758 ... 33615 : - |
| To GenomeBrowser | scaf9045:27758..33615 |
| Genes list of scaffold | scaf9045 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | ATG3 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin-like-conjugating enzyme atg3 | GO:0005737 GO:0006914 GO:0015031 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.17623.t1 | gi|156395722|ref|XP_001637259.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.17623.t1 | gi|573902441|ref|XP_006638945.1| | PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Lepisosteus oculatus] | 0.0 |
| aug_v2a.17623.t1 | gi|556969351|ref|XP_005993477.1| | PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Latimeria chalumnae] | 0.0 |
| aug_v2a.17623.t1 | gi|734643580|ref|XP_010750783.1| | PREDICTED: ubiquitin-like-conjugating enzyme ATG3 isoform X2 [Larimichthys crocea] | 0.0 |
| aug_v2a.17623.t1 | gi|586467269|ref|XP_006864247.1| | PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Chrysochloris asiatica] | 0.0 |
Transcript
| Transcript ID | aug_v2a.17623.t1 |
|---|---|
| Definition | - |
>aug_v2a.17623.t1 gtgtctttttctgtagatcgcttttatatttgcggacacatttttactatggcaatgcaggatgttatcaataaaatgaa aggtactgccctcggtgtagcagagtaccttacaccagttctgaaggtaagatcacatctaccaatcacaagttcgtatc ttgttaattggtgttccatcagtagatttcttaacttttattttccacaggaatcaaaatttcaagatacaggggttatt acaccagaggaagtgtgtatattgttatttgtttgcattttcttaggaattgtagaaatctgtgtatataataggaaata ttgctcgaagacgaatgctattttacttgcaattgctgatctcagaaagaaaataaaagaactgaaacgagctgtcatct tactgttttaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacatacata tattaaataaacaatggactgattttcaactttttgtgttaatcatttttcagtttgttgctgcgggggaccatttagtt catcactgtcccacatggaaatggtttgtactcagtttgcctcttggttaattgctgtaagttatgtgggacaccccccc cccccccaatctttttctttcctctgtgatcatatcatattttgtttttagggactgtggaccagatgaaacaagagtta aagcttatctacccaaagaaaagcagttcttgtatacaaagaatggtaagaataaatgatcagacatatcttagcaacat gtaaattattattaatattgccccttcattagtggaagttaagccttggcaataatgctgtgttcccactcagtttattt tgcaaataccacaaaacaagtcgaagaaattgttataattaaaggaattctaggagttgaacaagtaaatacatcaataa aggtgtggcttacagtcgaataattccacacattacagtttcaattgaagtaatcctctgagagttgttttcttttgtgc tcagttccttgttacaagcgatgcaaagagatggaacatcaagaggagaatgaggctattgttgaaccagatgaggatgg aggctgggtagacacacaccatcatgttgatgtcagtggggtacaagttgttcctgggggtgaggagtcattctctgaga tgactctagaatctgaaaaggtgtttacccttaattttgtgatctagattcaagtatgtcaacggctcctgagatgtgtt cagaaacaaataaatgcaagtcatgaaccagaatggactcttatgttcaagacatcaaagaactgtgataatataatgaa ttattattaactttgagaatggtcaattggtttttgcatcaggagtttcagcccttttcttcccctgagagtgaacttta agatagttccacatagagaaagtggtttacccaggagaatttaatttccttgtagtgcaagcagcttgatttgctaagct tcattgaccttgaacaaataactggtagggcactgcactaccattgcagaggtcggggttcaagcccctttcagggattc ctcactactactgaagtagctctaaaaactgtgaggatcatagacattcacctcaatctgcagttcaaatacatgaattt catgtattttaacatgtatatattgataaataggaatcttgttgatcatcatcttttcagaatgcaagggacataaacca agccgaaannnnnnnnnnnnnnnnnnnnnnnnnagcagttgatatggaaggtatgaatagtaatattatttagttttgtc agcactgcaattattattataataccttggcttagcgaacactcaaaattcttatggcatgttttcattttctagccttt gaagaaagtggcatgttagaaagtgatgaggtattttcatgcaatgttttatttatgagagtaatgaatttcatttgtgc caagtttgtggtgtccactgctacaacaaataacaattcttggtgttaattcttgttgctaggcaacattgtccattaaa ccaacatcaaaaggagatggttcagcagatatgagtaccactggtgggattttacaaacaagaacttatgacatgtacat cacctacgacaaattctatcagacaccacggttatggctctttggatacaacgaggtctgtgtcacatgttcctgtaaat taattagcttaccacagtgaccttccgatttaagtcacattcagaaaccctttaaatgtgaaatttgccaatagctgttt tgataagattcccaaaggttcctgcaatccctctctagaggcaatgtcataccttttgagcggaactccagtggggttaa aaatgctgtaaaaatcaatggaaatggaaactaaggctaaagttccttttgcaagaagtttgtacatacactaaattcaa tttttgtcgtcttcagctcagaattgcaagggtttagatggattgaatttggtctatgggtttaagttttgatgcaatta attccaaaaatctccaaaattttaacatggatagctcttgctggcaaaattcatttgatattcttgtttaggaaggaatg ttgatgctagttttgaatcaagtgttttgcttttcaaccaatatttgagattaacagcaaaacagttcctctgtaacatg gatcaaaaaacagtgaagtagtgatcttaaccttacaataaaaagtaactggatctcttttatttagaatcgagaaccat tgacagtagaggaaatgtatgaggatatgagtcaggtttgcttttatttatatatatgaaaagaaaactcctcttatgtt atctgcaggctttggattggtccgttgagtgaaaaaactgtgaccaaggtcttgaaaatgctacctgcagcctcaggcag cattttcaagacctcagtcacagtttttttactacatggactgatcctaagctggcaaataacctttattttttaattct ttcacttccacttcgacccacacaaacatgtcgtgctttgcaaatgcagtgaactaaccatcattgtatagaggaatttc ttcatttttaatattgtgatagaaatctgttttgaaaagaaagcttttgtttttcaactttcttgtgtagtaaaaagctg gtttcaaaaaaagcttttgttttgaaaaaaactttttcactaatcattgccatgctagtgggcagagaaagaaaaatctg cactacataaggaaccaatcagattactgaattcgttacgatgccctctcagtaaaataataatggtttattgttcttgt cctttctgtctgacacttattctgggaggtttgaacgaattttactgtaatgagcaagaagaaagcagcatgtgggaaga gttacattaaattaggcaaattcaaatgaagtattagtaataatagtaatagccgttggacaggcacaacgggatgcttt tgccaaattgaactaaaaggagcacaagggttgatatggataccctttgcacaaggcacaactagtaaacaaaaagctaa tgctgcatgagccatattatagtacgaataataacattattggtaagaatgaaatgacactatttttctccaaaggacca tgctaagaagacagttacagtggaagctcatcctcatttgccaatgacaatggcctctgtacatccttgcaggttagtag ctcattcatagaggcctgatatttcaatcaagattctcatcatgtatctaagaaccacttgacaataaggtaattctatg tggtgagaacataagtgacacacaagccatttgcccctttttttttgttctcaccacattttgacaatatcatgtgatca ttactgaacggaagcatgtcagcatggaattcattaattgtcaatgaacaggaattttagactaactttgactactttcc atattacataagtattgtgttcaatgcttgaggtttctcaagtttgatttatcagttgaagttgtaattttcttagacat gcagatgtaatgaagaagatcattcaaacagttgctgatggaggtggagagctgggtgttcatatgtatcctttaaaaaa atagggacgtagtggtgattgtgttgtattatttgtacaagtgggtttttcaaaatattaaaattggatgagtctgtagg ctgaaagcaacttgaacatttccaaattgaatgacaaactgacaataatcttattattatacagcacattagctccagtt tggttcacaccaccaaaaaaaagatttggttggttcttaacaaatccaattagccaatcaaaagaaagaattctgagact aaattgcactgaattaactcttttttgcactgtgtttacaaaaaaagctgcactgctatctgccaatcagaatcaagtaa tcttgtcatatatatagtatcagaatgcactggcatgtaaattccttagtatttaagtaactgtatttttaaatacttgt gatgctctgggttcaagcattcctcaaccccaaataatttggatttgtttcaagtcatgaatttctggatgactgcaacc atatttgttgtaaaggaacctacaaccagagttttagttacctgaaacctagagcaagggtcagggtgacactcatagcc agtaacgtgatgtttttgaaaaaaaaaatgatctaatgggcatcaatgttatgaatttgacctctaatttttaaaatatc aatgacaagccatgagtgtcaattccttcagaggcagagaaagggaagacaccctaaagatgaatattgcaaattgtgtg aatagatacagtaaaggacaggttggtttttgagccttgcatttacccttaactttttcgttcaggtatttactcatctt tctcaaatttgtgcaggctgttataccaacaatagagtatgattacacgcgtcatttcacaatgtaacccacattacctc actctcaagaatattactcaatttgttaaatgtacaaagaatgaaactaattctaaatcacaccaagaataatgttctag gaattattattacaaattttgtttgaacacaactgtcagcacaattattggccagttcaagaagtattcttaaatgcaga tgtgtgtgtataatttaaatactacaagacagtgatatcaataactagagagagatattaggacagagtaaattgaaaaa gtcaagagtaggagcctacactttgattgaagggcaagtttatacttccagctcaataaacacaaaaatttaatagagat tataaatatggaattaaaactttcatttttacaaagaagtgtgttattcgttttcaagttttaacttgctttcattagta aaggtgtttaacagcaaaaatgtctggtgtcaaaaacttggttgacattcaccagaagaaccaccagttccccaggaccc cgtttcttgaaagtctcaaaacttttcaggcccgaaaagccattcattgaacttcgactcgcttattttgttaagttggt cttttcaaatgttgttaagggatggaaaattaaaagtaactataaagtttcgtgcctcgaggtgccttcgttttgaggat acaaagagaattaagtaa |
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Protein
| Protein ID | aug_v2a.17623.t1 |
|---|---|
| Definition | - |
>aug_v2a.17623.t1 MAMQDVINKMKGTALGVAEYLTPVLKESKFQDTGVITPEEFVAAGDHLVHHCPTWKWDCGPDETRVKAYLPKEKQFLYTK NVPCYKRCKEMEHQEENEAIVEPDEDGGWVDTHHHVDVSGVQVVPGGEESFSEMTLESEKNARDINQAEXXXXXXXXXAV DMEAFEESGMLESDEATLSIKPTSKGDGSADMSTTGGILQTRTYDMYITYDKFYQTPRLWLFGYNENREPLTVEEMYEDM SQDHAKKTVTVEAHPHLPMTMASVHPCRHADVMKKIIQTVADGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM* |
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