Gene
Gene Model ID | aug_v2a.18250 |
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Locus | scaf9836 : 8081 ... 12300 : + |
To GenomeBrowser | scaf9836:8081..12300 |
Genes list of scaffold | scaf9836 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-48 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1, TPR_2 and DUF2977 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.18250.t1 |
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Definition | - |
>aug_v2a.18250.t1 tttatcaaaaggaaaatggatgaaaaggccaggaaagaaagagaccttggcagtcaaagatcagatttcaagtcactgag tagcttacaaacacttgaaaaatgtgtgattattagcattgagaaaggtgatcgaaccgaagagggtgacgcctatcgag aactcggtaatgcttacttttcactgggtgacttccgaaaagccattggatatcatggaaaacacttaaaaattgcaata gaaatcggtgatcgggcaggagaaggaagagcctatgaaaatcgcggtgttgcttacttttcactgggtgacttccgaaa agccattgagtatcatggaaaacactttaaaaattgcaatagaaatcggtgatcggtccggagaaggagcaggttatgga aatcttggttgtgcttacgaatcactgggtgactatcaaaaagccattaagtatcataaaaaacttttgaaaattgcaca agaaatcggtgatcggtgcggagagggagcagcctatggaaatctcggtagtagttacgagtcactgggtgactatggaa tagccattgagtataataaaaacttttgaaaattgcagaagaaatcggtgataagnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnggtgatttccgaaaagccattgagtatcatgaaaaagacttgaaaattgcaaaagaaatcggtgatagggctggaga aggggaagcctatggatatctcggtaatgcttactattcactgggtgacttccaaaaagccattgaatatcatgaagaac acttgaaaattgcaatagaaattggtgatcgggccggagaaggacgagcctatggaaatctcggtattgcttatcactca ctgggtgacgtccgaaaaggcatagagtatcatgaaaaaggctcgaaaattgcaatagaaatcggtaatcggtccggaga aggacgagcctatggaaatctcggtaatgcttattggtcactgggtcagttccaaaaaggtgctgagtatcatgaaaaat gcttgaaaattgcaatagaaatcgctgatcgggttgcagaaggactagcctatggaaacctcggtaatgcttatttttca ctgggttacttccgaaaagccattgagtatcgtgaaaaaggcttgaaaattgcaatagaaattggtgatcgggtcgaaga aggacgagcctacgcaactctcggttgtgcttactggtcactgagtgacttccaaaaagccattgagtatcatgaaaaag acttgaaaattgcaatagaaatcggtgatcgggatggagaacgacgagcctatggaaatttcgggaatgtttccttttca atgggtgacttccgaaaaagcattgagtatcatgaaaaacacttgaaaattgcaatagaaatcggtgatcgggccaaaga gggacaagcctatgcatttctcagcaatggttacaacttactgggtgacttccgaaaagccattgagtatcttgataaag acctcaaaattgcaatagaaattggtgatcgggcagaagaaggacgagtgtatggaaatttagggaatactttcctttca ctgggtgacttccaaaaagccattgagtattgcaaaaaacatttgacaattgcagtagaaatcggtgatcgggccggaga acgggtagcttatggaaatctcggtaatgcttaccagtcactgcgtgacttccgaaaagccattgcgtatcatgaaaaag gcttgaaaattgcagtggaaatcggtagtcgggccggagtagtggaagcctatggcaatttcggtactgcgtactgctca ctgggtgacttccaaaaagccgttgagtatcatgaaaaaggcctgaaaattgcaatagaaatcggtgaccggttcgaaga aggacgagcctatggaaatcttggtagatcttacttgttactgagtgccttccgaaaatccatcgagtatcatgaaaaac acttgaaacttgcaatagaaatcggtgatcgggtcggagaaggaattgcttatcacaatattggtaacggatactcgggg cttggagagtttgacattgcagtgagtaattttgtttctgctgtgggtgtgtttaatactgtgagatctctaatgaagtc tgaaggtaactttaaaataaaatttcgtgatctgcatgagatgacgtacacttccttatggaggtcattgctaagaattg gacagatcaacgaggccttgtttgctgctgatcaaggacgagcgcagactttgtatgatgatttgctaattcaatatgga cttgcttcattctcatcgtgtgccacatttgactccaaagagacagcaattcgccttttcacagagctttcttcacaaat gatctttctcgcactcgaaggacttaggatcaacatttggtatttaaggaggggacaggaagttgtatttcgacaaggga tgctggaggctgatctcacagagagagattctatacgcgccttactacaagcagctttaagaaaaatcaaagctgaagtt aaagtgagatgcgaagatcgcacatttgatgaatcagacaatgaatgtccatctagcacaaaagtgtgcgaagaagtgga aaagtcgtgtcagtcttcaggcaatccttttgggccattttatgatgcagttattggtccaattgttgacttgcttggat ctcaattcgacgagttggtcattgtttctgatggtgcgctatgctttaccccatgggctgcaattgttgaatcgattaga attcgcactgtcccctctcttaccagttatcaattgatcttaagtgtacccgagagccatcacaagaagacaggggtgct tttggtcggaaatccgtacttatacgagttggagaaacctctacccgacttaccatgtgctcaagaggaagttgaaatga ttgcgtcaattcttaacaccagacccttaacagggagagaggcaacaaaagctgaagtgataaaacggatgtcgtcagtt ggtttaattcacattgctgcccacggaaacaagcgcactggagaaattgccttatctccaaaccttggatggacttccaa gttcccagaagaaaaggatttcattttgaaaatgtccgatgtacaagcggccaaacttcgagctcgtcttgttgtcctaa gttgctgtcacagtggacgaggcagaattttgaagggtgagggtgtggtcggtattgcacgagcgttcttggcagctggt gctcgttctgtgttgatatccctgtgggcaatagacgacgaggctaccatggtgttcatgaaaagcttctatcaagagct gaaggaaggaaaaaccgccggtgctgctattcaccaaacgatgaaatcccttcgtgaatctgacaagttttctgagatga ggtactgggctccatttcaacttatcggagatgacgtcaagattgaattcgagacggatgacgacgtcaaaaattagggt gtttgtgaagataataaccagtgtaataggtttctctattactagcactannnnnnnnnn |
Protein
Protein ID | aug_v2a.18250.t1 |
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Definition | - |
>aug_v2a.18250.t1 MDEKARKERDLGSQRSDFKSLSSLQTLEKCVIISIEKGDRTEEGDAYRELGNAYFSLGDFRKAIGYHGKHLKIAIEIGDR AGEGRAYENRGVAYFSLAIEYHEKDLKIAKEIGDRAGEGEAYGYLGNAYYSLGDFQKAIEYHEEHLKIAIEIGDRAGEGR AYGNLGIAYHSLGDVRKGIEYHEKGSKIAIEIGNRSGEGRAYGNLGNAYWSLGQFQKGAEYHEKCLKIAIEIADRVAEGL AYGNLGNAYFSLGYFRKAIEYREKGLKIAIEIGDRVEEGRAYATLGCAYWSLSDFQKAIEYHEKDLKIAIEIGDRDGERR AYGNFGNVSFSMGDFRKSIEYHEKHLKIAIEIGDRAKEGQAYAFLSNGYNLLGDFRKAIEYLDKDLKIAIEIGDRAEEGR VYGNLGNTFLSLGDFQKAIEYCKKHLTIAVEIGDRAGERVAYGNLGNAYQSLRDFRKAIAYHEKGLKIAVEIGSRAGVVE AYGNFGTAYCSLGDFQKAVEYHEKGLKIAIEIGDRFEEGRAYGNLGRSYLLLSAFRKSIEYHEKHLKLAIEIGDRVGEGI AYHNIGNGYSGLGEFDIAVSNFVSAVGVFNTVRSLMKSEGNFKIKFRDLHEMTYTSLWRSLLRIGQINEALFAADQGRAQ TLYDDLLIQYGLASFSSCATFDSKETAIRLFTELSSQMIFLALEGLRINIWYLRRGQEVVFRQGMLEADLTERDSIRALL QAALRKIKAEVKVRCEDRTFDESDNECPSSTKVCEEVEKSCQSSGNPFGPFYDAVIGPIVDLLGSQFDELVIVSDGALCF TPWAAIVESIRIRTVPSLTSYQLILSVPESHHKKTGVLLVGNPYLYELEKPLPDLPCAQEEVEMIASILNTRPLTGREAT KAEVIKRMSSVGLIHIAAHGNKRTGEIALSPNLGWTSKFPEEKDFILKMSDVQAAKLRARLVVLSCCHSGRGRILKGEGV VGIARAFLAAGARSVLISLWAIDDEATMVFMKSFYQELKEGKTAGAAIHQTMKSLRESDKFSEMRYWAPFQLIGDDVKIE FETDDDVKN* |