Gene
Gene Model ID | aug_v2a.19171 |
---|---|
Locus | scaf11134 : 69496 ... 80092 : + |
To GenomeBrowser | scaf11134:69496..80092 |
Genes list of scaffold | scaf11134 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.19171.t1 | gi|260820012|ref|XP_002605329.1| | hypothetical protein BRAFLDRAFT_89027 [Branchiostoma floridae] | 1.0e-12 |
aug_v2a.19171.t1 | gi|655881887|ref|XP_008272527.1| | PREDICTED: LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D [Oryctolagus cuniculus] | 9.0e-11 |
aug_v2a.19171.t1 | gi|658837814|ref|XP_008436893.1| | PREDICTED: macrophage receptor MARCO [Poecilia reticulata] | 4.0e-10 |
aug_v2a.19171.t1 | gi|530650703|ref|XP_005311782.1| | PREDICTED: EMI domain-containing protein 1 [Chrysemys picta bellii] | 2.0e-06 |
aug_v2a.19171.t1 | gi|742093767|ref|XP_010832461.1| | PREDICTED: collectin-43 isoform X1 [Bison bison bison] | 3.0e-06 |
Transcript
Transcript ID | aug_v2a.19171.t1 |
---|---|
Definition | - |
>aug_v2a.19171.t1 cttgatgcgtgaattgtcttcacagaaacgtcgccagacagcgctcgcgcgtgtgtactgccacaactgttctgcagtaa atcacattgaaagtcacgcaaaatggctttaaacgaaaggcaaggtcctcttcgtttcctcattcctctggcaattgtgt tgttggtagtgtattgcgtatcgcttagtgtatttctagtctatatgatgcgagatcacaacctgttaaaacagcacatt caagatttacaaagccgagtcgattctctagcggaacagggtaaagttgaaacaggagccacttacgtgtccacaaatta ccacaaacctcgtgaaatcaaagaatccagactacatcaagctcaacaggttagtcaatgctacctacgcaaacaaatgc ttccctattgcgtttgtcttcaaaacaattagcatagaaatgtaaacttttgttacctatttctgttgttgagagtttgc gtcttcagagtagtaccgtcgaagaacctgttgtacaaagtagggtatatctttgaagatctggcatttgtgtacgaaga gatttaagtttcgattttgcttccttgttgagaaatcggtacaagcaaacaaagctcgccagttcactttcatcgtgctc aagtggcaatgatattatggtttcgtttgctaaggaacagactgaaaatcataaagataaactacaacattctaacaagg gacaattcttttaagaaatgatagagtcttaactaaaaaagtctgcatattcgacatggtcggctaaaattccgcatttc atatcttgtacttagttctgtcagaactgttcccagaccaacgcattttctatcttaaaaagtgactcgcagtgaagaga aaggaactgacattctgttttgaagaacgttaagcaatgttttgcgtggattaagctaattaaggtcacaacaaactcgg cttgaaagtttagtatcggaaagtgaatcaatggagaatggcgagacctcaacagccccaaattttccctcccttcaacg ctatacaaaataatactgtaaaccatactgtaaactttaataaatactcccatcagggcttttcagtatctatttacaat aattcaaaggcctgtcactaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcgcaaatat gcgatagcttgggggggggggggggggcacaaggacacccaagcgctggtttcaagttatccattgttgttcctccaagt ctccaactacaaatcttccgtatgataaccttgataacgattaagatgtctcgatattcataaagagcacactttgccat cacctggaccatcgtgtttcaccttgaaaccggcggcgcctctgaggtgagatctaagagagaaatacgcttgttggtca attgacaaaacaggaagttcatattcactggcttatacctaagggaccactagttaaccaatcaaaacaaaacacgtttt tgacttctgtcaggcgtgttaaagccaggtttcttaattacagtacaacaaaagacacggttgcagtaatgtacgctttt tctgacagtcaaaagtcgtttctgagccacgaatagcaaccaaaagtgaggggtttactcttttaacattctttaatgct atcaaatttgtatttgaaattgactcctagttcattcaatatgcaggaccccattgataacagtacattgtactgaaggg ttatcctggttaaatattcgaattattattaaggttttgttgctctgataaaacaatatgatggaaaatttagccaaaac tgcatctgcatttactcgctttccactgaagcggaaaagagacttccggttggcttctttgcttcagctcctatattcct ttatctcctattacattcacaacgacgaatttattatgagttttgtatcttctgaacagaaatccaacgcagctgaactg gagaaccttttgattgaaaggcggaggcgaaactctcgaaactcctgtgctatcaagtgtgcccctaatggcgtacctgg accagccggtccagagggaccccccggtcccccgggtcccccaggacctcggggtaagttttacaagttaacgagccata cgcttgcgcactaatactgcaacgaaatgaaccgtaaaatgaatattttacattgttttcgttatagtctaagtcacatt ggggttaaaagcttttggcggctcatggcacactgattgaaagcgcgcttaccacgataataattcatcagtttgtgtca gacatttgctttcgacgttacaggaacgcccactagaatggtggtttcttcgtcttacacaagttgcgcttcctcgagcg gctcaacaaactcaatgaaggcaataaaagaaaagtagtgtggcttaaatatccgatagctaacaatcaagtcgatctca cttttaagatcagcgattactcctagttcattaaagatcacatccccgcttggagaaaaaagattttggtttaaccttaa ctcttttatcaccaggctctaggggaagaaggaacaagaaaggcgacaaaggttcacttacaattcattttgtaatttta gttttaagccgttcgaaatactgttacttcatccgatgtttaaatgggtcaagaaatagaccacagtagaaagaagtttc gaaatgccccactgaatcacaaacaagcgactttattggtgcaaatgcggggccccatcattcatattgtgaagaatgga actggggcgtcttcaaatgaagaaatcacatcctatccatattttaagtattgtagcagtggtaagaaacgtcaactgat ccttttgtttgttttgattattcgctgggatgtcatccatcatcttaatccataaatcctcaaatcaagttcctgttgca ttttctgtgtgaaaatcaggaatgagaacgattttgtttatagcaaagaagcatgggaaccacagggcgccgggttgctt taaaacaataacttccactgaagttgtatattattttcatggttgggcagtgaacgtcagattctcataacatgagacaa gattctgagactcaaaaaagggattatcatcattgctatctttgaaattgatcaaagtaattgagagaagtttcagttta tttatttgccataagaagtacaagagagagaacaaaagaaaaaaaaatcttactatttagactctcatggcgaggaagcc caaaaggagccagggcttatagagaatgggctccctcagataaataattagactgacaaaatcataatttcataagggaa aaatggcagagctactgtaaatcttaaaacaaattagataatcatactgatcataattaggacaaaaacagaggagtacg acaaacgataaccaaatgtatacttggaaggagctttttttcgagtcgcgtcaaccaatcgtttcttctttttttcaatc caattaaggtgaaccaggatctatcggtcctcctggggaacccggtctcagaggtttaccgggagtaaagggagatccag gaccacgaggtaagcggagaagagagaagagacgtattccagtgagatttacgtaaagaaaactttccctggcgcagttc tctctaattctttgtcttcttttgcccaggtcaaaaaggatcatcaggaagtttggtgaggagacagtcgtctttatttg acagtaatagtgttgtgttcgctcatgtgaccagaagccatatttgcataatgaaacaaaggaggaatttgcataaaaat agagttcaaaccgcaaaagaatatttcactcctccaacatggccgccgtttctttgtttactccttcaacatggccgccg tgatgtcatgtgaacacactctattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgcttcaatga tgggttgtagtaccgagtggcgtggtgtttttccgttactgcgcctgaaatttccgagaaaacgacgaaacaaatgctta acgaagcgtgagctataaattaaacagtgcggcgaatgacaggcgctatttgataacaacaaattagtgaactacatctt cgaagatagcactgattaaaagccatggacagttccaaaaagacacgtgttcgtagctgtaattggatcacctttgcgat tttgatgtcgttgatctactgtattcttgtcactgttttcatgttgactctgtatcgtgtagtaacgatgcagacagcca agatccaaacacttcaggccgcaacgagcaatctcgaagcccgtgttcgaaagttggaaaccagtttgtcagcggagaga tctgaagaatccgaaacttccaagaaaaatggagccacaaactcaatgaatccgagaaataaggttagttttatgatcgc cagaaacttaacgaaacaaagccctagacttcttgtccgaattctaaaattatgcatgtttactgatttgcaaatgaaag cggcggttcgaattccatatgcaatactttgcaggttccaagttctggaaatccagcgcgagataggcgacaatttgaag gccctcgacttcccggaggcagtacgttgacaagacttcttcttttagtaacaaacttcaataaactaaatcgataacac ggtgtcattcagccagttatttatgccgtaggaatagttcatgaattcatgatgctgacttctgtttttcatgatcactt aataagaacaacaagttactgattttgtcgcaaggtttaggggaatgggtaccctttccacacagccatggatcgagaga gattatctaatgatcagtacgcctttaaaagcaatactaattacactgctttggttaataatcgctaaacagtgtgaata aattgccgccttgttattatagctttaataggtattgttaaaagtgcaatttagtttgctttgcatttaaatcagagctc aaacggagtaaataatctcctaaagcttacgacacctatctgtcgcctcacttccgcatatttcttaagaaacgactcga ttgctttgtaatggttcactttagatgcttcctgagtaaagagaacagaacgcgcctgttcactcagaccatttcccttc tcaaaaatgttaaattgtcggaattttaaggagagaaatttgttgtcattatgccgcctttttcgtcctcaaaaaccatc ataaactgttctataatcattggacggaccaatgaccccaaatttgttgctgtcattctctctcaatagtcaagattaca tacgtctcaaagtatagtattttaacatatgaaaaactacgagtaccggcgctaaccagaagtaacgttattttgcagat ccgatcagatgtaaaaaaggtaagttgcccatttgtaacgttgcattacaaacattgcgttacggtgttgcgttacggtg ctgaagagacttctcaaaaataacctaactgttaagaaggcttttcaatttttctttcagtttgcaagggaaggaaaggt aaaaaactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgc tctatattccatcgaatactcgcgttcattgtgtaacccttacaaaggtcatataacacgtaaaggtatttgtaatattg cctgcttcgcgataaaaaaggagctatcaaaatttttctccatgagaatttaactgagaacttacggcttttctagctac tagttgagaacgcacagaagcagaccaaatttaactgctcttttaattaaaatccatccttttcgctcacaggatcacca gggcttcctgggccacccggacgactggtaagtcaaaaataacaattgatctctaaatggaaaaagttgttttcgaattt gatcgttttgaatttcaacattatggagtgaatattacttttcataacacaaacaaatgtttcgacaaccttgttcccag ggtccctcttcgtcccttgcttggagcgagagaggaaaggatgaagagagaccctgggaatgaggttgatgtctggacac taggaagtcatcatgcagaattctgtttttctcgcgatttcagataagtgaaagcattcatttggcgggaacggggaagc gtatatcaccataccgtaagtgaaacgaccagcaaattttgaattttaatgttcgacgtgaagtcagtaataaactgaaa tactcatttgcacctatcaacaagagaagaaactctctgattaagcggattcttagcgagcacgcttgattccagtatct gagggtaagtagaatatgtgctattaatccgcaaacctcttatgaaattcctctatgttgctggttcagaacattccttt cgtcatcgatttgtcgcgcgtgcgctgaatttgtttccgtctctatgatgctgattgccgtatttatcagtttattattt atttttcttattagtacaacgcataaccaactggcatatcgcacataaggaaggcaggatcaggtatcatcccactgtgg gcgaaatagagatcagagttggcggtgtctatttcgtgtacagccagatcttttatgcagatggaaccacacatcacatg gcccatgacacatacattaacgaaaagagggaaatgtcatgtgaggccagcataattggacaaactaaatatcttgacac caaataccaaggacgtatatttcgacttcgagccaacgacaccatttcggttcgtggacgctacaccaaaaagttcaaca tggtgccgtgggcaagcttcttcggggcgtttttagttcatctctgagagatgacatcattttaacaaaggccctctttt actgggcagttcttttttttgcaaatgacttgttccgaaagttttgttgtggacaaaccggacgtctcaggttgcgagtg acgttgctttacttctcagttggaggttgtctccctttccataatcccgacatcaaaaatcctgtttactggctcacgcc tcaaatccatgaggcactcgttgaaagacagatgttactcatcacaatgatggttgggaaattcgttgcaatttctcgag tagcgttacagaaccgaaagtacaactcgattgctccatcgccatggaaaagttccatgaatttgcacagagcctttcat aacaaaaatcagcaaaaatagcctatatgttcgcttataatgttgttttcttgattcaaatcatgtgataacactcgaga gagtatttcctctctaagttggacatcccttttaattgaaaaactatttcattgcaaaaacaacattccgtgccggaaaa agaccaagccagtttgatgttgcacaaaccgtactgacaaatgtagaatacagttttgcgacaactaaaagttaagattt gcattgattttccttacccggtttgctataccttttgcaaggttggaattctatataatacttggaacatatgcattcat taagtttcacttttatccaaaagtaataatcagtgtagttttttaatgttcaagttaaagagaccttactggcctttcct gttcataatctacagtttgcataattatcaatttacgcgtttcaaaagttggcatgtttgtgttcagtcggtttggagcc aaaccttaacgatatttgcgaatatagcgcactttaaacggaactaaagtaattctatacgcttcaaaactgtagcaaaa aatcgttttctttttcgtgatttgacttattacaggaaatatgtttagtttcgctttgtattattagcgatgtctttgtt gttaaatgatggtatttccagtgtcatatgtaataaa |
Protein
Protein ID | aug_v2a.19171.t1 |
---|---|
Definition | - |
>aug_v2a.19171.t1 MALNERQGPLRFLIPLAIVLLVVYCVSLSVFLVYMMRDHNLLKQHIQDLQSRVDSLAEQGKVETGATYVSTNYHKPREIK ESRLHQAQQKSNAAELENLLIERRRRNSRNSCAIKCAPNGVPGPAGPEGPPGPPGPPGPRGSRGRRNKKGDKGEPGSIGP PGEPGLRGLPGVKGDPGPRGQKGSSGSLTAKIQTLQAATSNLEARVRKLETSLSAERSEESETSKKNGATNSMNPRNKVP SSGNPARDRRQFEGPRLPGGIKITYVSKYSILTYEKLRVPALTRSNVILQIRSDVKKFAREGKDHQGFLGHPDD* |