Gene
Gene Model ID | aug_v2a.19393 |
---|---|
Locus | scaf11422 : 740 ... 6105 : - |
To GenomeBrowser | scaf11422:740..6105 |
Genes list of scaffold | scaf11422 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
geranylgeranyl transferase type-2 subunit beta | GO:0016740 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.19393.t1 | gi|76253908|ref|NP_998277.2| | geranylgeranyl transferase type-2 subunit beta [Danio rerio] | 0.0 |
aug_v2a.19393.t1 | gi|731268289|ref|XP_010603435.1| | PREDICTED: geranylgeranyl transferase type-2 subunit beta isoform X1 [Fukomys damarensis] | 0.0 |
aug_v2a.19393.t1 | gi|719756765|ref|XP_010214946.1| | PREDICTED: geranylgeranyl transferase type-2 subunit beta [Tinamus guttatus] | 0.0 |
aug_v2a.19393.t1 | gi|260837378|ref|XP_002613681.1| | hypothetical protein BRAFLDRAFT_287963 [Branchiostoma floridae] | 0.0 |
aug_v2a.19393.t1 | gi|147900123|ref|NP_001089291.1| | Rab geranylgeranyltransferase, beta subunit [Xenopus laevis] | 0.0 |
Transcript
Transcript ID | aug_v2a.19393.t1 |
---|---|
Definition | - |
>aug_v2a.19393.t1 ccttaaaagagaaatggtggaaatggcgacctcagtacgaaggaacacttaaatcttacaacatggtgagaaacgtgtta tattactttctattttttgacagagttcttattccgagataacgaaaaaaattggtgaggtggtttggatggcgtgtgag acaggtctttccttatgaatgtggcatagttcagcccttcttttgttctccacttaacctacagtttgctccagtatttg ttcaccactaaattatattaaataaatggaaaataatgtgcaatatacacaataattccattgaacttgccaacgccttg tagtgggtctgacaatatttcaagtcttgacagataattatgtgaacgaaaggtttttgtttttcacaaaaattgtgaat ttaatgtgaaagaatttatagtagtgtgaacgatctcaggatggttagagcagaatatggcagcttataggtttaccaca cactgttctccctcatgtataagctatcgaagcgaatcatttatcgtcgaatgatgcattttgttttagggcactcaaat aaaagatgtaaaactcccagacgattgtcccaaagaactgctattggaaaagcatgctgattttattgctgcttatggga agaaaaaagatgattatgtaagtgcgaagatatcttacctgttacgaatgcgcaatggtgtatgtgttgtggctcaaagt tgtctcagtactgccagtttgttctcttagcattgttggacacttgtattatttgtcatggtacaatgctatnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnacattgtgttgtccttaggtcatgatgtgtcattctcccttaatcactttatcaaaggctgacctg gatttcactttctgtagaccatcttgaacctcactttattttatgattttgttatgatagtagagtaagtttacatgcaa tagatttttatagttcgctttcacatgacatcatagtggccatattgttggactaaaacaaagaaatggcagtcatgata gtggaccaaaacaatctttggggaattgaattctttttttgttttaataattctttctaattgtttcatggaatcagtat ggctgctgcatggtcatgtgagtgaaaaccatccatagaagacagccactttgagttatgtagccaagggttgttgaata atctttcaactaactgcttcaaaataaggagaacatagtgaagtactgtagctgatgcttcttgtcagtgtttgatgttt aagccctgtttttgagcctctgtttttatcaattcctcttatgtggaatcatttttctctttttccaggaatattgcata actgaatttcttcgcatgagtggcgtgtactgggggctaacttcaatgtttttaatgaataaacaagatatgatggagaa agatgaaatcattgaatttgtcaaatcgtgccatcatgataatggtggctttggtgccagtgaatatcacgaccctcatt tactttacacgctaagtgcaatccaggtattctgtatttttcatgttaagtatcaggctattgttgttaaatggttacgg tttatattatcagtgaacaaccacatattgggttagttattatccatgccatccagaccaattataatagtattattagt attatatcccgcacaagtaaatagtacttccagtgcacactgattggctagcacggaggtgattatttaccgctcagcat ttagctgcatgcaaaactctaaaagctgatcatttttcctgtcagtccaggaatgttttgatgaaaaaagaattgtgtgg aaggataatagtcactttccaagatgttcatgaaaataattaatggtaaaaggcttccagataaaggggagacaaagggg atgaaggggctaaaaatgtgcatgtccttagataataatgataatcattatgtagagaaatgggtagaaatataaacagt aattgtgatactaaccttcctgttgcatttcaagctattcatgcttgttaattaagttaatatgaaatcttccttaactt aatggttagtcaaatttttatcaagtgaaccatttgaatcatgtttttatctcatattgtatcagccttgtgcttttctt gtgtcacttgctgtctcttagattctttctctctatggatgtattaattcagttgagattgaaaaggctgtggaatatgt ctgcaagctgcagcaaagtgacggctcatttgttggtgacaagtggggttagtaaataatttatatttattcaaacaagt tgctaagggttgagtaatcaccataaaaagattatacatctgctgtttcgagcattagtccttcatactttgtgttgatg gattaatgctcaaaacattggcttcataatccttttatagtggtaacttgctcttatcaattgatttaatttgataccaa attcttgttaaattgattcaatcaataactaaactgaagtaaaatcttgagctgctttttgaaaactttaatccaagctt tcatcaattaaattactgtcagggaatgacatgatgcaatagtaaagtaaagtcgttaggctaattgttcttgaaaacta cagcaagtaacgcagctcgacaagattggtccgaaagcatgtgatagaggctcctagcagctgccatatgatccatgttt gatcagctgagactcgatttttggagatggaggaaagtcgaaatagccagagaaaaaccttcaagtcaggttgagattga tttaaccctttgactgctgaagggttccccattgagaactttggtgctagacacagtaaaatctataagtgccatttggc acttacaggagttaaatggttaaactcaacagcacacatagattggcaaaaggttggatcaaagtgttcaaaacacagat caagacctctctccgttaaatcaattgaatccataatttatcacaatgctgcagaaggacaacagcaaatgccaaattct tttgattcacttcctcaccaacatcgtgccacagtttctttggaaagcaaacctttcattaagttgttttttttgtgctt gactgtctattctactttcctagttaggtgttacaaaaatgttggaatgaagatagtgcagaactgtaatttgaaaaact caagtgcaaaagagtgaacaagtgtatgaatgcaaacacagacatctcaactatgttctgattttgttaccaggtgaagt ggacacaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttttgcgtctcacttccccactgaa aaaaaaataatcttgtcattaaaaaagaacagcctgctttaccgttttttcacctgtggaaattgatgtattttattagg gaagactggatgccatagaccttcagaaagcggtggagtatgttttgtcatgtatgaattttgatggtggctttggatgt cggccaggatcagaatcacactcaggacaggtgcctgaatatgatcaataaataatagaaacacttaaataaaagacaca ctagctgtacatgctacagtaggaggctaacaagctccaattgatcgagtataaataaagttgttgttgttgttgtatgt ataattacgctgcatctttttggacagattttgggcctaaaatcagggttggggcgtatcaatgaaaccatctcttatga tgattaatgaatgtatggtgtggtttcataagcctggacctttggcagttctttcagaatgacttttactttacttgaga aactgcattccaatatggatgtggaatctgcaactgttatttttgtctaattgatcatcttagtaagagtcaagcatttt attgaagagaattttttaaggtgactctgagaaatttgggggcatagagtgtatcatgaattttattgtgaacccattct tttagacgtcatttattaaaatgtggccaataatatgaatgacaaagttagaagctttcacaaatttgtgataagtagag cagaatttaaacattttaaacttttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn naggaagtgctgattggatcaaaaaagcataaaacagctgatttgaaaattcacccacatttatgaaatcttaaatggaa tgaagagatatgcattgagtattgggtattgatttgtgcatcccagcaattgagcaaccttacattcacatgactttctt agtctctctgctttctcttcagatttattgctgtttaggtgccttagccatcgcggattctctgcattatgtaaatgctg atatgttgggatggtggctttgtgagaggcagcttccatcaggtggattaaatggtgagaagaaatggtcgttgttgttt atagtatgattttagttgatctgcccaagtgtttctcgtcgggggctttgtcttgcacaccaacgaaataaaattgtcag cgttag |
Protein
Protein ID | aug_v2a.19393.t1 |
---|---|
Definition | - |
>aug_v2a.19393.t1 MGTQIKDVKLPDDCPKELLLEKHADFIAAYGKKKDDYEYCITEFLRMSGVYWGLTSMFLMNKQDMMEKDEIIEFVKSCHH DNGGFGASEYHDPHLLYTLSAIQILSLYGCINSVEIEKAVEYVCKLQQSDGSFVGDKWGVKWLNSTAHIDWQKGRLDAID LQKAVEYVLSCMNFDGGFGCRPGSESHSGQIYCCLGALAIADSLHYVNADMLGWWLCERQLPSGGLNGEKKWSLLFIV* |