Gene
Gene Model ID | aug_v2a.20009 |
---|---|
Locus | scaf12157 : 126 ... 4263 : + |
To GenomeBrowser | scaf12157:126..4263 |
Genes list of scaffold | scaf12157 |
Manual annotation
Study field | Apoptosis |
---|---|
Gene name | Adaptor TRAF family25 |
Annotation by Blast2GO
Annotation | GO |
---|---|
tnf receptor-associated factor 4-like | GO:0009987 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20009.t1 | gi|573906500|ref|XP_006640970.1| | PREDICTED: TNF receptor-associated factor 4-like [Lepisosteus oculatus] | 0.0 |
aug_v2a.20009.t1 | gi|584013577|ref|XP_006801580.1| | PREDICTED: TNF receptor-associated factor 4-like isoform X1 [Neolamprologus brichardi] | 0.0 |
aug_v2a.20009.t1 | gi|390345669|ref|XP_780297.2| | PREDICTED: TNF receptor-associated factor 4 [Strongylocentrotus purpuratus] | 0.0 |
aug_v2a.20009.t1 | gi|291238309|ref|XP_002739073.1| | PREDICTED: TNF receptor-associated factor 4-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
Transcript ID | aug_v2a.20009.t1 |
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Definition | - |
>aug_v2a.20009.t1 ccgagctcggagggtatgattatgtatttgtaagcaaagtccctgaagattgggaatgtctagtttgtaatttaacgatg aaagatcccgttcagattgtgggttgcggtcatagaatgtgcagcatttgcatggagtctttgttcaggtaaaccatggc tgagaaattattaacacaggaaattagtttcagcggtcaatacgtttcagttcattctttacataacgcttttgctagag gatatttacgttattattgagcgattaaatttgttcagatagtttgttgagtcggtgatggtgatttttatcttgatgta aatccaaagtgaaagtaatttcattgcttgtggtatcgttttcgggattttttgccgactttgtttttgaaatgtcatgg gcactcgcgatccttccttatgtcaatattgccgttcgttgttatttcgcttcaagtctttatgcaccgtttcaatggaa acttcaacatccaccccccggggcaaacctcgagcatttcactattgtctgtacccggggagcggggaatttgttgggta aggccttctcagaggtggggaatttgatctttgctacctaggtggggtggggaaaattgaaccggcagtgttaggtttcc agtcttcaaatgttcacatgcccgggctttgtcaggggttagctcgggggtgggggggtggtgttgaactttagggttaa tcggtgcactagtgaagtagcatcgagttctagagttttcctgttctgatgtgatacttcctctgtcaatcctcttaaat tcgcaagtggctggcaaccagagtttgattatgaatttatccttatttttatcttgttgccgatttcagacgcccttcgc caagatgtcctgctgatcgacagcctctgtcacgcagcaaggtaggttatcacgccaccccctatggtgtgcgtgacggt atcttgagtatgggagcgatcattgcttctcgtgaagattactactattctagacggtcaccatggaaaggggcgaaggg caattatatacaattatgacgtgtgcctgcgtgactgtcatgtgctgaacaacaataataaaatctccttagccttagca ttgatttaaatgacgcgtgtcccggggcattatttgagaatttttcgcttccttttggcgattaagcagaaacccctcgc ttcttatcacattatctcacaggattgaccgtacaaatgtctatattgtgagcgtgcgggagctcggagaactagcaaac ccatggttacacccagaaatctgggcaactcactcagttacaaatagtggctgccttttttgatggtaggtatttgccga tgcggcttgttaccgaaaaattctcgatctcatcgtcaactgctcgcattctggatgtccctggagaggagagcttcgct ttgtggaggtaagctgttagtggttgtgaatttaatggtttgtatcgcgtagacgaaaaggctgaatggttcggtgatgg ataaattattttcgattaacctgtatgttttgcaaaacgcgagcaattctcaacgcattggcgagtggcgcgcagtggcg agtggcgcacattgactgcacagggacaccaagtattttactaacacactaaatagacaagcttgtgcactgactcagtc gataatactttccatcgaacaatcaattaaccaatgaatcaatccatcacattgaccgactcaatgaagagctgcctgat tttagaataaatctggaagtgcgaagtgaaggtcgaaggttggagagctggtcctgtcatcccgttgtttcctcggacaa gaaacgcaaagctgacgtactcctggtggtaatccctgacgaactgggatctagtcccgagggtcagcgctataccagca gtcctttcacgctgcagaaatcggaataagggttccgcggtgttggacgaggtggctcattagggacttaactttaaatg aaataaactcaaaggtgtctgattctcttcttaattctgttcatttatttgaagaaacaccagacgagctgccatttcaa agttgtttcgtgtccaaactccggctgtgaagagaggctcaccaaacaggacttggaagaacatatttcgcttgaatgtt cttggagaacaattagctgcaaatactgtggagtatcaatcatatacaatcaagaaaaggtaagaaactcgctcgtctcg agggtgagccgccagggccgccggcctgaaaaagttgtataacgtggatcttctttgcttcttcatgaaagttcctgctt ctgttttgcgggtttttttctcgcttgggtgttgggtaactagttgtatggctcattaatagggaccttacgtaacacga cggctggaggactcatgacggcagaatgatgataaaatgtcgcgctagactgtgcatttccaggcttgcgcgacattttt tcgtcattctgccgtcctgagtcttccagccgtcctgttacgtaaggtccctattaatgcaaacacaagacaggcggccg atgttaccttgtactttgtggtggtgccagtcatttcctgttcttttctttgtgtttttgtatttagaagcaccttgagg cttgtgaacagtttccagttcagtgcacgaacaagtgtggcttatggattgtcccacgaagaaaggtttctgtctactta taacatgcatgtctaggagagacacatacgaaaagaccagctttacagaataagcgggttggaattttacgaattgactg ttttcacgatcccataatgcaatacgttttggggggttctttacataaaaacaatacaatttatttacccttgggactgt atcatgcttcagtgaactgattatccattgttttaatgtaaataaacccccaaaaagaacagtattatgggattggtgaa aaaagcgaatggctttttgggacattcgagaaacgggccccagggccatgtatagttgtttcatgtatcaaactatcgtt tttcttttcttgcattgcaacagtcgccgaaatgtcatcgggttgtccttacgtggtggcagaataactgccaccattac cactccacaaaggtttagtatttttctaattggtaatcccacaaacgataatcgaattaacttccctatcaaaaaacaag acgattgatctgcctttctttcattttcgttgacagcttgaggctcatattcatgacgattgccctaaaacagaggttcc atgtgaattcaagaacttaggctgttcagcagtggtatggaatatattttgatatcagcatcatcgggcaaagtctgaac gattttcaacaatttttttaaaatccttctttctggtgtacagtattctgaagcaatacttgggaaattttgaccagctg cgtgttgttggttttttttcacacagtttcccagatccgatgtcaaattacacttagcctcagaagtcgaacatcacctg tccttagctctccgcgggctagaagcaactcaacatcatgtgcgcgcactcgccagcctggttaaagatcaatcagagga aataagacgcttggagaagatgtccgagaagtatgccccgtacgtatggaaaatatccaactttcaagcagtgcgcgaga gggcgatctcaggagaacaggaatctctactcagtgaagccttttatttgtcgaaaaacgggtataaattgaggatcaag ttgttaccaaacgggggttgtgcagaccctgagcaaaacaaaacaatccggggaaattatttatctgtgtttatcaaagt gattcccggtgaatacgattcgatattgacgtggcctttcgacaagaagattcgtatttctttgattgatcaagaagtta acaaagagaacagggtaaatgcaaccaaaattgtttattttcagtatgacagccgtccctgtcctcagactgaacctgaa aatggatacggatttggtaattttatccatcacaacgatttacaaacccgaaaatacttaaaaaacgataacattttcat catggtcagccaagcataaagggcgttgctgatcagcaaataaacaatcnnnnnnnnn |
Protein
Protein ID | aug_v2a.20009.t1 |
---|---|
Definition | - |
>aug_v2a.20009.t1 MKDPVQIVGCGHRMCSICMESLFRRPSPRCPADRQPLSRSKVFADAACYRKILDLIVNCSHSGCPWRGELRFVEKHQTSC HFKVVSCPNSGCEERLTKQDLEEHISLECSWRTISCKYCGVSIIYNQEKKHLEACEQFPVQCTNKCGLWIVPRRKLEAHI HDDCPKTEVPCEFKNLGCSAVFPRSDVKLHLASEVEHHLSLALRGLEATQHHVRALASLVKDQSEEIRRLEKMSEKYAPY VWKISNFQAVRERAISGEQESLLSEAFYLSKNGYKLRIKLLPNGGCADPEQNKTIRGNYLSVFIKVIPGEYDSILTWPFD KKIRISLIDQEVNKENRVNATKIVYFQYDSRPCPQTEPENGYGFGNFIHHNDLQTRKYLKNDNIFIMVSQA* |