Gene
Gene Model ID | aug_v2a.20189 |
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Locus | scaf12385 : 7456 ... 13320 : + |
To GenomeBrowser | scaf12385:7456..13320 |
Genes list of scaffold | scaf12385 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-36 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains TPR_1 and TPR_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.20189.t1 |
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Definition | - |
>aug_v2a.20189.t1 gctatcagtcaagatagctgcagatcaactccgcatgaattgatcgtccgttcttttcgctgaattcggatttgagcaat aggtaagtactaagtaacactttaatcaacattatgcactcgcaatcattaattgtttttcaaacggaccaaatcttttg tcttttccgagcaacatgttacttccttttgcgatgacagttggtaaatgttccgatcacattttcgcgaaaattgattg tcactgaggttgtcgatacagcactttcatcgtaaaatgaacagttgaacaatgctcagcattccaaaatgattatcatg gatcttgttattcaaactagcccaagtttatgaaacatggtccattgcggacgctatgaaaaccagcgaaagaaatccaa tgcaacgcgctttcgattattaatttactttaacgctttcctgcaatcatcaaacagtcttaaacattacgagcaaccta gaaatatgatcactcaaaggtgtttagcttaatttgctcgctgtgtgccactgaccaatcagcaaagcaatacttttgaa aagattactgctctgatctgcagtttgcaattacgcccggtttcgcatatttcttagtcataagcaaagtttatgcacga gggatcctttggagaagcagtccacatgaaaatgaaagaaaacgaaaccaaataaataaacatacaatgagtagtaacgg aacaaggacttagatgttacaggacggaagaaatatatcatggcactaagacaaacctgtcttttttttcttaatttttt tttgttgtcaagtctcgtcctgaagttggacctgaagttggacaatctttgttaatatagtttaccttaaatcgatgtca tcatctctcctttctaagttagtcaatatacttaccgaacagtgtaatggccacacaacaaagggctggtgtaatgtgtg tgcaccttgcttttcgcctttttttcgacgaaagatcatgcgttctctccgttctgaattcgttcgtcacgatatttact gctcttcgtcaagccacacagtgtaagggatctgagtgaatgcgaatgagagacgcactataagtaaaaatcaccaacta atcagcaaagttaagtcaacaatatagcttaaaataatgaaataatgcaaaccaattagtaaagttatattttcaaactg ggtcttctttggttttcttacaagtacccgtgcacatttcatggttaaaaaaaatgtcaaagttcgggaaaatcaggtaa aattatgtggagaaaaaaaattacaaaatctctgtgaagtgaaagcaattatatcattaaacgaaaataaaatattacta actaactaatctgcaaagtgttaaataacatcaaccgcgagagaacagagaaagtggcacaaattccaagaatagaacta ccctttagaacctatatacggtaaccagaaaacaatctatttggatagctaaattgtgtgcgaagaattattgccttgcg cgtagataaggacatttgactaattttcatggcaaagatattttgcgagaaaccagtgtgttctagcgaactaaaaaaga aacgactctttcccaccaattaaagccactgcgacgggtttctctgctattaggaaaccattatttttcggaaatcattc tacaaggtaatcattctgaagtcaagtgtccgtaaaaaaagataataataaaaaatacgaagggcgatagaattataagc ttctttgtgcaaaaaacaaaaatcaacatgcacaaagcgcatctttagaaactttttttttccaaagaatccttggagct tgtgcgaggacaaatgaccaaacttcgatgcacctctttcctcgttgaaacgattcttgacccgccgttattttggcttt gaatttgttacatcttttcagcttttttcgcaaggtctgtgtaatagatgcggcaagcattattttttgatagttcgtcc aattatatatacaccccactgtcgtaagcagtgcttggttttacttctccagctgatcatagtcagcagcaacacaaaac tgtgctacaaatcgcttagtattttttcttttgccatgggtgtttgaggatttaaacccctgtaactcctattacacaat tctataggcactgggagaactcgtattgattataaaaaactaagctcaagatctagtaaatcccaagaaactactgagct gttggttaaaattagttcctcatcgttaagatcttttaattttaacaattgttgaatagttaattagattttacttcgtg taagccttaagattttgctggtacgtgctgcatgcaaggtggtcccccttgaatttgtcgtgcctaacatttttttggta tgtctacggcaggtggtccttcttgagtgtatcatgtcttgaaatattttactgagatccgaagtccaattgacaggcca aaagggtgcggaaagtagtaaatagtaggagttaatgttaaggagcgagaattgatctaagtagagacaaactcaaaata gaactgataccagtaccacagtgccagagtgttgcttttgaagtaattaaaagagtctcggttcgtttagcaaggcgagc cgctctacaaattatatattagtgctaaaggcaagcaacattcaggcgactgaagggttttctaaaaaaggagcaataat aagttcaaaaacagaagctgaatctggaattgccaccattaaaagccaaaacttgatcgttgttggaaagataatgttga aacaaaaaatctatgacatctgttgacaacatttcctttaccaagtgttcctccagctgttacgcattttattttctttt ttctttcactaattaattatccatttacttgttttacttttgtaggtaagcaacacagaaatggaagagatttccagtta atgggtgacattaaaaaagccattgagtaccttcaaaaacatttgacgattgcaatagaaaatgatgatcgcggccgaga aggagcagcctatggaaatctcggtaatgcttaccagtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggccattaagtatcttgaaaagctttt gaaaattgcaatagaaattggtgatcgaagaggagaaggagcagcctatggaaatctcggtagtggttacaagttattgg gtgactatcgaaaggccattgagtatcatgaaaagcatttgaaaattgcaatagaaattggtgatcgacgcggagaagga ggagcctatggaaatcttggtaatgcttaccagtcactgggtgactatcgaaagggcattcagtgttatgaaaaactttt gaaaattgcaatagaaattggtgatcgagcaggagaaggaaatgcttatcataacattggaattcttttcttttttcttg aagaaattgaaaatgcggtggataattttgtttccgctgtggatgtcttcaattctttgagatctctattgaagtctcaa gataagtggaaaaataactttcgtgaggtgcacgaagggacgtacactgctttgtgggtgtcgttgctaaaacttaaaaa gatcgatgaagctttgtttgcggttgaacgaggacgagcgcagactttatctgataatttgttgattcaatataaactta atgtgtccttatcatcagccacaattgacaccaaagagacaatatctcgcctcctgtcaaagatttctttcccaactctt tttctagcaattgaaaactttgcaatcaacatctggtttctgagaaagggaaagaaagttagatttcggaaagggaggct ggagggtgatacaagagaggaagatcctttacttgccttactgcaatcatccttagaaaaaatgggagatgaagagacaa gatgtgaagatcgcacatttgatgaaactgaaaatgaaggctcgtttagcatagaagtgcggggtgaaggagttggaaaa ccaccatcgtcgcctttagataacccctttcagccattttatgatgcagttattgatccaattcttgacatgcttgaatc tcaagacgacgagttggtcattgttcctgatggtgcgctgtgccttaccccatgggccgcagtcactgaatcgattagga ttcgcattgttccatcacttataagttatgaattgatcttaagtgcacccgaaggacatcacaagaagaagagggcgctt ttggtcggaaatccttgcttaaaagagttgaagaaacccttagatgacttaccatgtgctcaagaagaagtagaaacgat tgcgtcaattctcaaaaccacacctctcacagggatacacgcaacaaaagctgaagtgatgaaacggatgtcgtcagttg gcttaattcacattgctgcccacggaaacgatctcactggggaaattgctttgtctccaaaccctggatggtcttcaaag ttccctcaaagaaaggatttcattttaaaaatgtccgatgtgcaggctgccaatcttcgagctcgtcttgtggtgctaag ttgctgtcacagtggacgaggcagagtcttaaagggtgagggtgtggtcggtatcgcgcgtgcttttttggcagctggtg ctcgttctgtgttggtggccctacgggcaatagatgacgaggctaccatggtgtttatgaaacgtttctatcaacacttg aaggaaggaaaaaccgccagtgctgctgttcagcaatcgatgaaattccttcgtgaatctcaacagttttgtaagatgaa gaactgggctccattccaacttatcggagatgacgtcaagattgaattcgaggcggatgatgacgacaaaaaatgagaat atttttgcattcctttgtcaccataataaccggcgttatatgttcctctgactattttacttgtcggtaacgccacataa cagaacaactacgaaattgtgcggt |
Protein
Protein ID | aug_v2a.20189.t1 |
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Definition | - |
>aug_v2a.20189.t1 MGDIKKAIEYLQKHLTIAIENDDRGREGAAYGNLEIGDRRGEGAAYGNLGSGYKLLGDYRKAIEYHEKHLKIAIEIGDRR GEGGAYGNLGNAYQSLGDYRKGIQCYEKLLKIAIEIGDRAGEGNAYHNIGILFFFLEEIENAVDNFVSAVDVFNSLRSLL KSQDKWKNNFREVHEGTYTALWVSLLKLKKIDEALFAVERGRAQTLSDNLLIQYKLNVSLSSATIDTKETISRLLSKISF PTLFLAIENFAINIWFLRKGKKVRFRKGRLEGDTREEDPLLALLQSSLEKMGDEETRCEDRTFDETENEGSFSIEVRGEG VGKPPSSPLDNPFQPFYDAVIDPILDMLESQDDELVIVPDGALCLTPWAAVTESIRIRIVPSLISYELILSAPEGHHKKK RALLVGNPCLKELKKPLDDLPCAQEEVETIASILKTTPLTGIHATKAEVMKRMSSVGLIHIAAHGNDLTGEIALSPNPGW SSKFPQRKDFILKMSDVQAANLRARLVVLSCCHSGRGRVLKGEGVVGIARAFLAAGARSVLVALRAIDDEATMVFMKRFY QHLKEGKTASAAVQQSMKFLRESQQFCKMKNWAPFQLIGDDVKIEFEADDDDKK* |