Gene
| Gene Model ID | aug_v2a.20430 |
|---|---|
| Locus | scaf12678 : 246 ... 3969 : + |
| To GenomeBrowser | scaf12678:246..3969 |
| Genes list of scaffold | scaf12678 |
Manual annotation
| Study field | Retrovirus |
|---|---|
| Gene name | Adi-Retrovirus-related 53-8 |
| Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, DUF3342, BACK, Kelch_1, and Kelch_2 domains. |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.20430.t1 | gi|585664008|ref|XP_006811935.1| | PREDICTED: kelch-like protein 5-like [Saccoglossus kowalevskii] | 0.0 |
| aug_v2a.20430.t1 | gi|291236222|ref|XP_002738039.1| | PREDICTED: kelch-like protein 17-like [Saccoglossus kowalevskii] | 0.0 |
| aug_v2a.20430.t1 | gi|260805698|ref|XP_002597723.1| | hypothetical protein BRAFLDRAFT_77372 [Branchiostoma floridae] | 0.0 |
| aug_v2a.20430.t1 | gi|260809365|ref|XP_002599476.1| | hypothetical protein BRAFLDRAFT_81019 [Branchiostoma floridae] | 0.0 |
| aug_v2a.20430.t1 | gi|524887955|ref|XP_005100559.1| | PREDICTED: kelch-like protein 12-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | aug_v2a.20430.t1 |
|---|---|
| Definition | - |
>aug_v2a.20430.t1 gtatttcggctgcaatatggccgcccattctgagattctcttgtcgaaatgtgctcatttccgtgagcaaggtgaattca tcgatgttcgcttaaaggttggagagtacgagtttcccgctcatcgcattgtacttgctgctaatagcgactatttccat gctatgttagcacgcggaatgaaagaatcttaccaggaagtgatcgagctcaaagatgaaaacatttctgctgctgctac gaagaaattaatggatttcatgtacagtggagagctcaatgtgaatgatgaaaatgtatttgaagtattgattgcagcag atcatcttcaagttacaagtgttgtgcaacaatgctgcaaatatcttgagaccaaacttgttgagctcgggttcgatgtg cagttttacggccgcatcatcatggttgctgatcgacgcggtttgaaggacttgaaagaggctatggaaagtaaaatggc gtcattgtacaaggaaatatgtgagaaggaagagtttttgtcttatatgaatgcagatctattatcagctctcctctgtc gagatgacctcagagctccatcggagaacttcgtcttcaaatcagtgatgcagtggatcaagtacaggaaggaagaaagg atggatttggcagctcaagttatcggaggagttcgtttgggactggtggacatcaaggatgtgatcgatgaactcgatac tgaggaaatgcaggtgatcccagaaatgaaaacgttgttgcacgaagcattcatgtacaaccacaggccttcgaggagtt ccgcgttcgcattggcaaatgggaaaccaagatcaaagagtatggtaggagagagagtctgtctttttctatcttttagt ttgcttaaaaacgtcatttgtgggacgagtttcataatttttcctcaatcattccagtcttttctctctgcacgcttgtc acgcaacgccaacccatcctagccagttactgacttccctaaaatgagcgttttgcagcgtaaggagattgcaagtcaat aaaagacttcccgggaataaaaacattatatccacgacacacagtgagattcaaggctatagaattgtcaaaaggtgtgt tgctatatcccctttttaaagttaaaactggttggtaggcaaatccctgtgctctgattggttctttctcggtcaggatt ttgctgtacggaccatttccatggaaacggtccaatccatgtatttttgttttggagcaaagcccgcaaattcaacatgt gcaaccaagacagcgaaaaaaagtgtgaaaattgtcattcttcacattgaaactaccagcagaagctaaaaagattgaaa tttttccgaaatttcaaagatggatgaagaagaggatcattttttaagtgcaagccaccggaagtgtattttactatcag gaacagagtgccatataataaactacttactaacagagcttgcttgggccgtaccggggaatattggcccttggtcgttt ttgtacggacctcgctgtgttcgttctgtactgtcatgacctcgggccaatattcccctgtacggccctcgcactcggtt agtaagaggttagtattttacccctcttctgcagtctgggttttacactgaccaattgaaaaaagcactttgcaagtctc aaagattttaatttatcatttcaaataggcagcagcccattctttctctctctccagggtactgaaagtggtaaaatgca aataaaagggggaagtggcacaatgttaagtaatggatggctgcattcatctccttgttggacattaatgattagaagaa gagggataaaaactagttagggctgataagaccccttgctaatatgctgaggcagacatacaattcagtgnnnnnnnnnn nnnnnnnnnnnnnnnnnnnngttggttctgattgaggataggggaaaactggagcacctgggaaaaaacctcacaaacca gagtagaaaaccatcgaactcaatccatataattatggttccaggactcctaatcatacctgggcgacattggtggaagg ctgggcctttcgcactgtggcagccctggcacaaagagctacatgatgtctttgagctacaaaaaaaaataaaacttctc atgttcttgactgtcacatttctaggttctcgttgccattgctcccaagcatgttgcctgttttgatgtccagtacaaga cgtgggagctggtaacatcaatgcaaaaactagttaggcaaggacaatgctattgcgcagaagttattggcaattatttg tatgttgcagaaacagcctcaagtatttgtcgttatgacatagttcatgacatttggagcaacctcccaccaatttctag atcattaggtattcaaaaaatttgttccttgtgccattttgaagaccatctctatgtcattttcaagtcttctgcacctt acagatataacatagctacaaatcaatggcaagctgtggctagctcaaaagctgtttgcaacctgagccatgaaacattt agtaacaaagcagctgtggtgtacaaatcatgtatatacgtattgtatggccaaggagaatttaagcaggtagaaaatga tcattggggcagcggcacattttctcctgaagtgtctgctctatattgttttcatccaaagaaaaatgtttggcaaaaga aagcatcaaccaaaactccacactttgggtccagtcttttagtagtaaacaataacctctgtgttgctggtggaaggggc tcattatcatatagtagagaatgtgttccagctgccgttgaagtttacaatgaccaaaaaaatgcatggtcggttgtaaa acaaacacacattccaccaaacaagcttggagcagtggaaattgaagggagggtatatttcatcatcaactctttcccag tcgacagtggtattagaatcccaccaggggaggtctaccctgttgttctggaggggtgggaaaacttgagaaaggtcaat agagatgcagttttgtgctatgttcctctaaaaacagaggatcttataacagaacatatcagttctctaggcagtggact ggaattagagtatactttgggtctgagtagctgaaatgccaggcatcataattaaggatcttatagcatcaattttcagg ctttaaattatagttttctcttttttttcctccctagtatagctaaataacatccatgtaactattattttactttaatt tagtgtggtgaaggcaacaactttgccatactaagtgtactgagagacactggaaaagtgtttaaacacggtatgcgtat ggcatatcagatgtagaaaataacaggtatccagatgtctctttctgtagcatttatttcatgtttaaagtaaacatttg aaaaggtttttttgaaaagaatctgtgaggaatctgaagtctctttagtttgtgctaacaatatcaaaccttttagccag aggatggaagtgttggggtttcttttagaagggtgggtacctaagagtacttgacagaaaaaaactctcagaggagaaag gcaaaccaacaacaattatcaagacttaagtgaccaaacagggttaagaatgagattcctgacatattgttaggtttatt gttggtgatcaatattattatcttaataaatgagaaaaatacta |
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Protein
| Protein ID | aug_v2a.20430.t1 |
|---|---|
| Definition | - |
>aug_v2a.20430.t1 MAAHSEILLSKCAHFREQGEFIDVRLKVGEYEFPAHRIVLAANSDYFHAMLARGMKESYQEVIELKDENISAAATKKLMD FMYSGELNVNDENVFEVLIAADHLQVTSVVQQCCKYLETKLVELGFDVQFYGRIIMVADRRGLKDLKEAMESKMASLYKE ICEKEEFLSYMNADLLSALLCRDDLRAPSENFVFKSVMQWIKYRKEERMDLAAQVIGGVRLGLVDIKDVIDELDTEEMQV IPEMKTLLHEAFMYNHRPSRSSAFALANGKPRSKSMVLVAIAPKHVACFDVQYKTWELVTSMQKLVRQGQCYCAEVIGNY LYVAETASSICRYDIVHDIWSNLPPISRSLGIQKICSLCHFEDHLYVIFKSSAPYRYNIATNQWQAVASSKAVCNLSHET FSNKAAVVYKSCIYVLYGQGEFKQVENDHWGSGTFSPEVSALYCFHPKKNVWQKKASTKTPHFGSSLLVVNNNLCVAGGR GSLSYSRECVPAAVEVYNDQKNAWSVVKQTHIPPNKLGAVEIEGRVYFIINSFPVDSGIRIPPGEVYPVVLEGWENLRKV NRDAVLCYVPLKTEDLITEHISSLGSGLELEYTLGLSS* |
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