Gene
Gene Model ID | aug_v2a.20436 |
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Locus | scaf12680 : 20036 ... 24580 : + |
To GenomeBrowser | scaf12680:20036..24580 |
Genes list of scaffold | scaf12680 |
Manual annotation
Study field | Cytoskelton |
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Gene name | alpha or beta tubulin like protein2 |
Study field | Flagellum |
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Gene name | Adi-alpha-tubulin1 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapience alpha tubulin (AAA91576). This is an axoneme related protein. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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tubulin alpha-1c chain isoform b | GO:0000086 GO:0000226 GO:0003924 GO:0005200 GO:0005525 GO:0005634 GO:0005829 GO:0005881 GO:0019904 GO:0030705 GO:0036464 GO:0051084 GO:0051258 GO:0051301 GO:0055037 GO:0070062 GO:0071353 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20436.t1 | gi|676429184|ref|XP_009045517.1| | hypothetical protein LOTGIDRAFT_185446 [Lottia gigantea] | 0.0 |
aug_v2a.20436.t1 | gi|733605064|ref|NP_001290045.1| | tubulin alpha-1C chain isoform b [Homo sapiens] | 0.0 |
aug_v2a.20436.t1 | gi|507570044|ref|XP_004668634.1| | PREDICTED: tubulin alpha-1C chain [Jaculus jaculus] | 0.0 |
aug_v2a.20436.t1 | gi|478509519|ref|XP_004429036.1| | PREDICTED: tubulin alpha-1C chain isoform 2 [Ceratotherium simum simum] | 0.0 |
aug_v2a.20436.t1 | gi|397511018|ref|XP_003825879.1| | PREDICTED: tubulin alpha-1C chain isoform X2 [Pan paniscus] | 0.0 |
Transcript
Transcript ID | aug_v2a.20436.t1 |
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Definition | - |
>aug_v2a.20436.t1 ttacttgctgaatcttgaattttaaaaatgcatgcgcaaaattcttagagtcgaaatgcttacaacatctatgacacaat acccacttttattatatggcaagctctgcgagcgggtaagatgaaccaaatcccgcgctgtgattggctacccgagcggg caagatggtgcggtaatgcccgcgcgggattgtccgttatgttcccgcaatcaatattttccgtgacagtaaaaagattt tctctgatttctctctcgggatagtagtagaaaacgaggaaaccggaacgcactaatacataatttacaactggcttcct tttcagtgttcgaaaataaaccagtacgaagatcatttcttctttcttgttcattattccatatagtaaatcttttattg accaagctagtatggtcaagatggctggatattggcctcgttgtctttttgcgttcttatggacctcgaaacgcacaaag agaacttggccaatatccagccatcttgactttgcgcttggtcaatatttgcataaggctatgcattgaatttaacagcc atgaaacatcaatcttctccaacaaacagtttatgtttctataacaacaggactgctctaatcaacttcgttttcgttga aaaactagcaataatgttcatcttctgatgtgaaaggcgccagtttggcggctgaaacaatttcaccgttgatttatgcg ttttctactgagcttcttttatagtgtaatctgcaacatttacatttggatgttgacataggttatttgaatattgaaat gcagtatgaaaagatgaaaccgaaaaaaacaaaaacagataaacaaaggaatgctcaggaaatttcaacggtagcgaagc aagatacgtgatagagaaaaaaaatatatcaatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnttattctctaggtaaagtcatgaatatttgatagtatgcagtcactgcaagagacagattgtctttctttataattag attttctgcgcattgcgtcccaaaaaaagagggtaaaataaaaaagaagaattttcagatgtgccgtcgttcaacagtct gttttttctcatctttcagatgaagtgcgtactggtacctacagacagctctttcatccagagcaactgatcactggcaa agaagacgccgcaaacaactatgctcgcgggcattacactgttggaaaggaaatgattgatcttgttctcgacaagctga ggaagcttgtaagtaaaatatttagttcagctgcttcgtgcagacggttaagtggctggcaacgatatatttcattgtgc cttaaatgaaggacagggcttgaataagcctacagaccaacgcaatgtacagggtaaatttcaattacaaatcacatatt acggtctctggagagtttgcgtggcatgcagtctcgtacctagagctctcgagcttttcagtcgcctgcaaaacaaggat tctggttgcgagattacgtggcgtggtaaattattcgaccttcactggctctgtagatttttatccactcctatgaatgg caagaattttcacccagtttgaaagtgaatttgcgtatctcactaaataaattcaaaagcttcacttaaaatcgtatttg caaacctaattgcgcataagaaaccgaaaggggaaagatcttttacttaaggattatatctccattaaacaggccgacca atgcactggcttgcaaggattcctcatcttccattcctttgggggaggcactggctctggtttcacatccctgcttatgg agcgactgtctgtagattacggcaagaagtccaagttagaattctccatttatcccgcaccacaagtgtcaacagcagtc gtggaaccctacaactccattctgaccactcacaccacactggaacactctgattgtgctttcatggtggacaacgaggc catctatgacatctgccgtcgtaacttggacatcgagagacctacttacaccaatctcaatcgtctgattggtcagattg tgtcctctatcaccgcttctctccgctttgatggcgcattgaatgtggatttgaccgaatttcaggtctgtgtgtagaat catnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnccatataaaataattaattacttggtttgtgggcaattaacactcattgaagaccaagccctcgtga agacatcctatatgggtacactatggcgggcagaattgtattggttagttgtgacctcggttggaggataaatgtagtgc gcatgcgctcttcgaggtcctgcgcgcacaaataacccccaagtcaatttctgctctttctgacgctgaagacactaaag ggtggtctggaaaaaatacagccttgtaaacgataaaagtcttgttaagcgtgggaccagcaaagattgtttactacaac catagggtttgcttgtttttaattgaagtaatcacttgttttactacagaccaacttggtaccgtacccgcgtattcact tcccactggccacttatgcgcccgtgatctctgctgaaaaggcctaccacgagcagctgactgtcgcagaaatcaccaac atgtgttttgagccagccaatcagatggtgaaatgtgacccacgccacggaaagtacatggcttgctgtctgttgttccg aggtgatgtggtaccaaaggatgtgaacgcagccattgccaccatcaagaccaaaagaaccattcagtttgtggactggt gcccaactggattcaaggtgaaaaaataaattgataagaatttctcatttgtcactgataaacgaactaagatacagttt attgatggtttttaaatagaagggaaagtcagagaacttagtaaaagctctaggtgagtctccggggcttccctcttccg ctcgatacaacaatcttcatccccaactgagacatttttaccaatggattctatatgttttccaggttggtatcaattac cagccccctacggttgttcctggcggtgacctggccaaagttcagcgtgctgtctgtatgctgagcaacacaacagccat tgcagaggcctgggctcgtctggatcacaagtttgatctgatgtatgccaagcgcgcttttgtgcattggtatgttggtg aggggatggaggaaggagagttctctgaagctcgcgaagatttggctgcactggagaaggattatgaagaagttggtgta gattcacaggatgcaggcgaagaagatgaagacggaggagatgaatattagacaatctgaaaaagcaaacctgcagctgt ttaaaattctttgtctttttccattggtttctgaatctcgatgaaaataaatgtttgttcagtaa |
Protein
Protein ID | aug_v2a.20436.t1 |
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Definition | - |
>aug_v2a.20436.t1 MNQIPRCDWLPERARWCDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDKLRKLADQCTGLQGFLIF HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNMCFEP ANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSQDAGEEDEDGGDEY* |