Gene
Gene Model ID | aug_v2a.20598 |
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Locus | scaf12905 : 11942 ... 14717 : - |
To GenomeBrowser | scaf12905:11942..14717 |
Genes list of scaffold | scaf12905 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-23 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20598.t1 | gi|512836120|ref|XP_002932195.2| | PREDICTED: G-protein-signaling modulator 2 isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
aug_v2a.20598.t1 | gi|512836124|ref|XP_004913797.1| | PREDICTED: G-protein-signaling modulator 2 isoform X2 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
Transcript ID | aug_v2a.20598.t1 |
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Definition | - |
>aug_v2a.20598.t1 agaagatttgaaaattgcaaaagaaatcggtgatcggaacggagaaggacgagcctctggaaatctcggtaatacctacc ggttactgggtgactatcaaaaagccattgagtatcatgaaaagtatttgaaaattgcaaaagaaatcggtgatcgggcc gaagaaggacgagcccatggaaatcttggtaatgcttatcagtcactgggtgactatcaaagagccaatgagtatcatga catacatttgaaaattgcgaaagaaatcggtgatcgggctggaaaaggacgagcctatggaaatctcggtaatacttaca actcactgggtgaccatagaacagccattgagtatcatgaaaagcatttaaaaattgtaaaagaaatcggtgatcgggcc ggagaaggacaagcctatggaaatctcggtaatggctatcagtcactggctgactatcaaaaagccattgaannnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaatctcggtaatggttaccactcactgggtgactatcaa aaagccattgagcatgatgaaaaacgtttgaaaattgcaagacaaattggtgatcgggccggagaaggagtagcctatgg aaatctcggtaatgcttaccagtcactgggtgactatcaaaaagccattgagtattatgaaaaacatttgaaaattgcaa aagatatcggtgatcggaacggagaaggaaatgcttatcacaacattggaaacgtatattattctcttgaacaattcgaa agcgcagcagataattttagttgcgctgtggaagcctttaatgccgtgagatcttgcttgaagtctaaagatgagtggaa aataaactttcgcgaactttatgagacgacgtacactggtttatggaagtcgttgctaagaatggaaaagttggatgagg ctttgtttgcggctgaacaaggacgagcgcagactttgactgatagtttgctaactcaatataaactccctgcatccttg ttagctgccacaattgacctcgaagagacagtatctcacctcttcgtagaacgttcttcaccaactctttttctagcaat tgaaggacttacgatcaacatctggcttttaagcaggggaaagaaagctatatttcggaaagggaggctggagggtgata aaacagagaaatatccagtacgcgcgttactgcaatcttgtttacaaaaaataggaactgatgttagagtaagatgtgaa gatcgcacatttcatgaacttaccggtgacatcctgtcgaggagagaagtgtgcaaagatatgaaaaaatcatttcagtc ttcaaacaatccttttaagccgttttatgatgcaattattggtccaattgctgaatttcttggacctcaagacgacgagt tgatcattgttcctgatggtgcattgtgctttaccccatgggccgcaattattgaatcgattagggttcacactgttcca tctctcacaacttataaattgatcatacgtgtacccgaagattatcacaagaagataggggcgcttttggtcggaaatcc gtgcttaaaagagttgaaaaagcccttacacgacttaccatgtgctcaagaggaagtagaaatgattgcatcaattctca acgtaatacctctaatcggaaagcaggcaacaaaagctgaagtcatgaaacggatgtcgtcagttggcttaattcatatt gctgcccacggaaacgagctaactggggaaattgctttgtctccaagccctggatggacttccaagttcccccaagaaga ggatttcattctaaaaatgtccgatgtacaggctgccaatctacgagctcgtcttgtggtattaagttgctgtcacagtg gacgaggcagaatcttgaagggcgagggtgtggtcggtatcgcacgtgccttcttggcagctggtgctcgttctgtgttg gtggccttgtgggcaatagatgacgaagctaccatggtgttcatgaaaagtttctatcaatacctgaagaaaggaaaaac tgccagtgctgctattcaccaatcgataaaatcccttcgtgaatctgaggagttttctgagatgaggtactgggctccat tccaacttatcggagatgacgtgacgattgaattcgaggcggatgatgacgtcagagaatgaaagagttaactgttccag tttatttcttttcttttgtcacgctggggagattttaatagaactagaaaaggctc |
Protein
Protein ID | aug_v2a.20598.t1 |
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Definition | - |
>aug_v2a.20598.t1 EDLKIAKEIGDRNGEGRASGNLGNTYRLLGDYQKAIEYHEKYLKIAKEIGDRAEEGRAHGNLGNAYQSLGDYQRANEYHD IHLKIAKEIGDRAGKGRAYGNLGNTYNSLGDHRTAIEYHEKHLKIVKEIGDRAGEGQAYGNLAIEHDEKRLKIARQIGDR AGEGVAYGNLGNAYQSLGDYQKAIEYYEKHLKIAKDIGDRNGEGNAYHNIGNVYYSLEQFESAADNFSCAVEAFNAVRSC LKSKDEWKINFRELYETTYTGLWKSLLRMEKLDEALFAAEQGRAQTLTDSLLTQYKLPASLLAATIDLEETVSHLFVERS SPTLFLAIEGLTINIWLLSRGKKAIFRKGRLEGDKTEKYPVRALLQSCLQKIGTDVRVRCEDRTFHELTGDILSRREVCK DMKKSFQSSNNPFKPFYDAIIGPIAEFLGPQDDELIIVPDGALCFTPWAAIIESIRVHTVPSLTTYKLIIRVPEDYHKKI GALLVGNPCLKELKKPLHDLPCAQEEVEMIASILNVIPLIGKQATKAEVMKRMSSVGLIHIAAHGNELTGEIALSPSPGW TSKFPQEEDFILKMSDVQAANLRARLVVLSCCHSGRGRILKGEGVVGIARAFLAAGARSVLVALWAIDDEATMVFMKSFY QYLKKGKTASAAIHQSIKSLRESEEFSEMRYWAPFQLIGDDVTIEFEADDDVRE* |