Gene
Gene Model ID | aug_v2a.20822 |
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Locus | scaf13174 : 7059 ... 14225 : - |
To GenomeBrowser | scaf13174:7059..14225 |
Genes list of scaffold | scaf13174 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-49 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.20822.t1 |
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Definition | - |
>aug_v2a.20822.t1 gaaagccgagtacccggagaaaacctctcggagcagagtacagaaccaacaatttcaacccacataattatgatgccgga tgtaggaatcgaacccgggccacattggtgggaggggagtgctctcaccactggttcatccctgcactccctacacccaa ggatgttttgttatatggatttgtttatatttttctgtacatactaacccctagaaaagttatatatggactacatgctc tctgtattagagctagaactttgcatggctttgcatggactttaaaggtgcaaatacagggaacctaatgttttgtttcc aggatttttgaccatatcctcacatgtgttcacttttcatcatgcgttttgctatatggaggcaataaaattatgttgac tgccagccattattttccaatttatattttacctccattaagcgaccagtttcatagtctgaggaggacagcttaataga agtccaactgtagctttcctttcaattctattaattttaattttgagacactgttcttatgtacatgtatgtgattagct tagttatgcttattgtaattcttaagtcacatttcctatgatgattgctaacttatgaaatgcacctcttacgatttcgt gtctgtgagagtcaactttttcacgttttttcattttgcagtttggatcgaaacaggagcttgtaaaatgtaaagtattt gtggaggtgcatgaatgaatgggcagctatccctttcttcttcatcatttcttttgagatgtttaatggttaaatgtgtc tttttgctttttttttccaaagattttcagtgcattggttggatatgctcttccagattgacttggttcttgatgggatg taatgtgagccggtttcaagtacatgacacaagtcatggctccagcaaagtccaagtcactgttttggcctctgagtggg gatccagtaaaggagggctttctaccataaacagagagttggccattcaattagccaaattttctcgtttggaggtcacc ttctttttgcccaaatgctctgacgaggacaagaaagcagctgatagccatggaatttccattcttgaggcagccaaacg atctggttataatgaattggattggctgagctttccaccacggcatttgacaatagatgtgattgttggtcatggagcta aacttggtcgccaagcccaagtcatccgggagtctcacaactgcaagtgggttcaagttgtacacactgacccagaggaa ctaggaatgttcaaaggttatgagaatcctatctcaacaggggaaaaaaagcatcatgttgaggtagagctatgtcgcat ggctgattttgtcgtaggagttggacccaaactggtggaagcttttcgtaagtaccttggctattgtaaaaagcaccaag atgtttttgagtttactcctggtgtttttgatgagttttccggtgttcaccaagttcttgacgaaagaaaacagtgcagt gttttggtttttggtcgtggagatgaggaagattttaagctgaagggatttgacattgcagcaaaagctgttgctgcgtt gtctgacgctattcttgtttttgtcggatcaccacatggaaaacaagaggagattgccaagagtttcatggattttggga ttcctgcaaaccgccttaaagtgagaagttacatggagcgggaagctctgaagaagttattttgtgaggtggatcttgtg ctgatgccgtcaaggacagaagggtttggcttgacaggcctagaagctctgtcagctgggcttcctgtacttgttagcaa aaactctggttttggagcagctcttggctgcgtaccacatggctctttatttgtcattggctgtgaagatcccaaagcat ggagagaggcgatcgaacgtatctggaacaaagacagaaagtcacgacttgatgaggttaagactgtgcgaggtttctat ggtgaaagatacagttggtctgcacagtgcaagtatcttaaagacaagatggttaaacttgttgatggtatgaactacat ttagattgtaccagcttgttggttaaaatgttaatttgaagacatgtgcagccaaaacaaatgctttattctggagtact gtttgatcatgtggcttattgcagtgtttgtaatgttgtggatgggacacattttataagaaatttgacaaggaatgaca agctcaccagtatcataataaaattatcattatgttggactgttatttcgtaactcatagggttgaattgtgatttacac tcggaaaaatgatgtgctatgatctcactaatatcaaaaatttatatctgtgatatttcattaatcatattcgtcctcaa ggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatctctgtttctattccttgtttgttt gtttgttgcagctcgtggttcgtgtccaagccacgtcatagaggggatacgacaagtttaccagaagagtgaagggttgg ttttgccagttccttggtgtgacgaattcagcttccagatagagaacattttcaccagacttaggatagttgcaaaagaa aagacacgcggaatagcgatcacaaaacaaatcaccaacatgacaggtatcttcacaccacaagagtattgcgaacaacc gcagattgtgttgattgaaggagaacctggtatgggaaagactacctatggccaaaaactggcatttgattgggcaagca aacaatgtcgtgaatgggatgagacttttccaagaattgatgtgctcctgttcctaagatgtcgtggaatcaattctact atctggggcgccattgaagaccaaattctgccagttgaattgaagccggaggaaaaagagatgtttttccaattcttgaa agaaaatccctccaaggtgttgcttgtactggatgggttagatgaggcagacccacaaaaactggaaatatacttgaatc ttattcaaaagaagcagcttcctggctgttacattgttctcacgtctcgccatgaagcggggagtaaagtgaggccgtac actgacactttgttagaaattgtgggattcacagtagctgatgcaaagtgtttcataagaaagtattttcagcacgcgga acatttggcagagaaacttatttcaaaagtttatcctcatttttattttcattttgacaagtgtaagtatgaggatgagg acaagtacaagtacacggatgaggacgaggacgtgttcgcgtatagggatttaagggaacttttaaaaaaccctttaaac actcttttgctctgtgttatcttcgaggatttagagggagttcttccaaccaataggacgcagctttacgtggagattgt tctctttattttgagacgctatgaaatcaagaacgacttatcaaacagaggtaaagaccttttgttagtttacaagaagg aactgatgatcctaggagaacgtgctttagactctctgcttagacatgagctgtattttgatgaccacaaaggggatatc aagaaaagtttgttaatgaagttaggctttctctcgatccagtctggtggtagcaagagagctccttgcgaccgttacgg gttttttcataagagttttcaagagttctttgcgggttacttccttgctttttctgccattgataatggtactaactcac acttagcactgaccgatgagagatacgtgaaagaactatctcatgttcttaaattcatgagtggaatccttgctcagcga tcggaggaatctgcagtgtcaactgtagaaagtattgcctcaagtgtaagtgagagaggcctcatatcccctaaaatcga gttttacttacgtgttgctaacatcttaattagggaatgcagaacttgttcagaagacctttacgcaaaagtagttcgta cctttggtgagaagcttcagttggttgacatggtagtgaagccttactcctttcgatggaacagtgaatttactgaaacg tttctccaggccctcgcctttaattccaccatttcaagcttgaaattgactcagtggaacttcagcaatgtgttcactca ggtcctcagagtaaacacctccatttcttctttggatttatcatccacttccattagtgatgagggagcaaattcacttg ctcaggcccttagtgtaaacacctctctatcctttttggatttgtcttgcaatttcattggttttgaaggagcaaattca cttgctgaggccctcagcgtaaacacctctctttcttctttgattttgtctttcaactccatccgtgatgaaggagcaaa ttcacttgctcaggccctcaaagtaaacacctcttttcttctttggagttgcgttccaattccattggtgatgagggggc aaattcacttgctcaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcagagtaaacacc tctctttcttctttgaatttgtcttgcaactccatttgtgatgaaggagcaaattcacttgctcaggcccttagagtaaa cacctctctttcttctttgaatttgtcttgcaactccatttgtgatgaaggagcaaattcatttgcacagacccttagag taaacacctctctttcttctttggatttgaattccaatgccattggttatgaggtagaaaattctcttgctcaggccctc agggttaacaactgtctttcttctttggattctaggttctaaaccaatgtgtgacttaaggtaatatttcaaaaatgagt gttaatgtttcttcgaacacgtgggatcaatttgcatggcgtcttttttcttcctggtttcgaagcatagacggactggg tgtggatgaatcttgcagggttcggtcacccaatagtgtggaagaagaagatgtattgctttcacagtccaagctttaaa gtacacaatacagagacaaactggccgttaagatttttcaaaaattg |
Protein
Protein ID | aug_v2a.20822.t1 |
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Definition | - |
>aug_v2a.20822.t1 MGCNVSRFQVHDTSHGSSKVQVTVLASEWGSSKGGLSTINRELAIQLAKFSRLEVTFFLPKCSDEDKKAADSHGISILEA AKRSGYNELDWLSFPPRHLTIDVIVGHGAKLGRQAQVIRESHNCKWVQVVHTDPEELGMFKGYENPISTGEKKHHVEVEL CRMADFVVGVGPKLVEAFRKYLGYCKKHQDVFEFTPGVFDEFSGVHQVLDERKQCSVLVFGRGDEEDFKLKGFDIAAKAV AALSDAILVFVGSPHGKQEEIAKSFMDFGIPANRLKVRSYMEREALKKLFCEVDLVLMPSRTEGFGLTGLEALSAGLPVL VSKNSGFGAALGCVPHGSLFVIGCEDPKAWREAIERIWNKDRKSRLDEVKTVRGFYGERYSWSAQCKYLKDKMVKLVDAR GSCPSHVIEGIRQVYQKSEGLVLPVPWCDEFSFQIENIFTRLRIVAKEKTRGIAITKQITNMTGIFTPQEYCEQPQIVLI EGEPGMGKTTYGQKLAFDWASKQCREWDETFPRIDVLLFLRCRGINSTIWGAIEDQILPVELKPEEKEMFFQFLKENPSK VLLVLDGLDEADPQKLEIYLNLIQKKQLPGCYIVLTSRHEAGSKVRPYTDTLLEIVGFTVADAKCFIRKYFQHAEHLAEK LISKVYPHFYFHFDKCKYEDEDKYKYTDEDEDVFAYRDLRELLKNPLNTLLLCVIFEDLEGVLPTNRTQLYVEIVLFILR RYEIKNDLSNRGKDLLLVYKKELMILGERALDSLLRHELYFDDHKGDIKKSLLMKLGFLSIQSGGSKRAPCDRYGFFHKS FQEFFAGYFLAFSAIDNGTNSHLALTDERYVKELSHVLKFMSGILAQRSEESAVSTVESIASSVSERGLISPKIEFYLRV ANILIRECRTCSEDLYAKVVRTFGNISKMSVNVSSNTWDQFAWRLFSSWFRSIDGLGVDESCRVRSPNSVEEEDVLLSQS KL* |