Gene
Gene Model ID | aug_v2a.20873 |
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Locus | scaf13249 : 2990 ... 6320 : + |
To GenomeBrowser | scaf13249:2990..6320 |
Genes list of scaffold | scaf13249 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-26 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20873.t1 | gi|742119343|ref|XP_010874738.1| | PREDICTED: tetratricopeptide repeat protein 28 [Esox lucius] | 0.0 |
Transcript
Transcript ID | aug_v2a.20873.t1 |
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Definition | - |
>aug_v2a.20873.t1 aaatggaagaagaagacggaagtaaaagaatctgcaccagtaaaagaaaaagagctcaccaatcgctgggtgactatcga caagtcattccatataaagaaaaaggttcaaaaattgcagaagaaattgatgaacaaggcgaagcaggaggagcctctgg aagtctcggtattgcttacacgtcactggatgattttccaaaacccattgagtatcttaaaaaagctttgaacattgtaa aagaaaccggagatcaaggcggagaaggaggagcctatggatatctcggtactgtttatctgttacagggtgactatcgg aaggccagtgagaattatgaaaaagatttgaagatcgccaaagaaaccggtgatcaaggcagagaaggagacgcctatgg gtatctcggtattgtttatcagttactgggtgactatcaaaaagccattgagtatcatgaaaaaaatttgaaaatttcaa aggaaatcagtgatcaagtcggagaaggagcagcttatggaaatctcggtaatgcttaccagtcactgggtgactatcga aaagccattgagtatcatgaaaaagatttgaagattgcaaaagaaatctttgatcaaggcgaagaaggaggagcctatga aaaactcggaaatgcttacgactctctgggtgaccatcgaaaggccattgagtatcatgaaaaacatttgaaaatttcaa aagaaatcagtgatcaaggtggagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnntcactgggtgactatcggaaagccattgagtattatgaaaaagatttgaagattgcaaaaggaaccggtgataa aggcggagaaggagaggcttatggaaatctcggtaatgcttacgactcactgggtgactatcaaaaagccattgactatc ataaaactaatttgaaaatcgcaaaagaaatcggtgatcaacacgcagtaggaatagcctatggaaatctcggttctgct cacaagtcactgggtgactatcgaaaagccatgaggtatcatgaaaaacatttgaaaattgcagtaaaatttggtgatcg ggggggacagctaatggcttatcacaatattggaactttgtacttttctcttgaacaattcgaaaacgcggtgggtaatt ttgtttctgctatagatgtcttcatttctatgagaattctcttgaagtctgaagataactggaaaataaaatttcgtgag ctgcacgagagtacatacactggcctatgtatgtcgttgcttgaaattggaaagttcgatgaggctttgtttgcggctga acaaggacgagcacaggctttgtctgataatttgttgcttcaatataaactaactacggccttgtcacctgcctcaactt acaccaacgagacaatatctctcctcttcgcaaagctatctaaacctactatttttctagcaattgaaggacttacgatc aacatctggtttctgaggacggaaaagaaaattgcatttcgacaagggaagctcgagggtgacagaagagaaaaagatcc aatacgcgccttactagagacaaactttaacactattaaagctgaagttaatataaaatgtgaagatcgcacatttggtg aactcgaaaacgaatacccgtctatcagagaagtgcgaggtgaaaaagtgggaaactcatcattaccgccttttaagcaa ttttatgatgccattatcggaccaattgttgacttgcttgaacctcaagacgacgagttggtcattgttcctgatggtgc actgtgctttacaccatgggctgcagttattgagtggattagggctcgcactgttccctctttaacaagttatcatttga tctcaagtgtacctgacggttatcacaagaagacgggagcgcttttggtcgggaatccctgcttagaccagctgaattta aagacatcatacccagccctaacatttgcccaagaggaagtagaaaagattgcatcaattcttaaaaccagtcccttaac cggaagtgaggcaacgaaagctgaagtgataaaacaaatgtcgtcggttggtttaattcacattgccgctcacggaaacg tgcaaactggagaaatcctcttgtctccaaacccaggatggaaatccaaattccctcaaggaagggattttctcttgaga atgtccgatgtacaagcagccaatcttcgagctcgtcttgtggtattaagttgctgtcatagtggacgaggcagaatttt gaagggtgagggtgtcgtgggtatcgcacgtgccttcttggcagctggtgctcgatctgtgttggtgaccctgtgggcaa ttgacgacgaagctaccatggagttcatgaaacgtttctaccaacacctgaggaaagggaaaacggccagtgatgctgtt caccaatcgatgaaatgccttcgtgaatctgaaaagttttctgacatgaggtactgggctcctttccaacttatcggaga tgacgtcaagattgaatttgaggcggatgatgacatcaaaaaatgagaaaaacatcagctctctttgttttgtttgtttg ttgctgctattgttattgttgtttcctgccctatttttagcttaatcatgggtttctctgactgttacacctgtctatag cgccgctgaacaagctggtttctctgtagactctggatgctttttgacttg |
Protein
Protein ID | aug_v2a.20873.t1 |
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Definition | - |
>aug_v2a.20873.t1 MEEEDGSKRICTSKRKRAHQSLGDYRQVIPYKEKGSKIAEEIDEQGEAGGASGSLGIAYTSLDDFPKPIEYLKKALNIVK ETGDQGGEGGAYGYLGTVYLLQGDYRKASENYEKDLKIAKETGDQGREGDAYGYLGIVYQLLGDYQKAIEYHEKNLKISK EISDQVGEGAAYGNLGNAYQSLGDYRKAIEYHEKDLKIAKEIFDQGEEGGAYEKLGNAYDSLGTGDKGGEGEAYGNLGNA YDSLGDYQKAIDYHKTNLKIAKEIGDQHAVGIAYGNLGSAHKSLGDYRKAMRYHEKHLKIAVKFGDRGGQLMAYHNIGTL YFSLEQFENAVGNFVSAIDVFISMRILLKSEDNWKIKFRELHESTYTGLCMSLLEIGKFDEALFAAEQGRAQALSDNLLL QYKLTTALSPASTYTNETISLLFAKLSKPTIFLAIEGLTINIWFLRTEKKIAFRQGKLEGDRREKDPIRALLETNFNTIK AEVNIKCEDRTFGELENEYPSIREVRGEKVGNSSLPPFKQFYDAIIGPIVDLLEPQDDELVIVPDGALCFTPWAAVIEWI RARTVPSLTSYHLISSVPDGYHKKTGALLVGNPCLDQLNLKTSYPALTFAQEEVEKIASILKTSPLTGSEATKAEVIKQM SSVGLIHIAAHGNVQTGEILLSPNPGWKSKFPQGRDFLLRMSDVQAANLRARLVVLSCCHSGRGRILKGEGVVGIARAFL AAGARSVLVTLWAIDDEATMEFMKRFYQHLRKGKTASDAVHQSMKCLRESEKFSDMRYWAPFQLIGDDVKIEFEADDDIK K* |